Experiment: KB with Erythromycin 6.25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1261 and Psyr_1262 are separated by 123 nucleotides Psyr_1262 and Psyr_1263 are separated by 81 nucleotides
Psyr_1261: Psyr_1261 - inosine-5'-monophosphate dehydrogenase, at 1,418,116 to 1,419,585
_1261
Psyr_1262: Psyr_1262 - GMP synthase (glutamine-hydrolyzing), at 1,419,709 to 1,421,286
_1262
Psyr_1263: Psyr_1263 - ATPase, at 1,421,368 to 1,426,062
_1263
Position (kb) 1419
1420
1421
1422 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1419.583 kb on + strand at 1419.640 kb on + strand at 1419.640 kb on + strand at 1419.640 kb on + strand at 1419.640 kb on + strand at 1419.644 kb on + strand at 1421.426 kb on + strand at 1421.426 kb on + strand at 1421.477 kb on - strand at 1421.496 kb on - strand at 1421.521 kb on - strand at 1421.521 kb on - strand at 1421.521 kb on - strand at 1421.521 kb on - strand at 1421.521 kb on - strand at 1421.531 kb on - strand at 1421.569 kb on + strand at 1421.570 kb on - strand at 1421.578 kb on + strand at 1421.578 kb on + strand at 1421.578 kb on + strand at 1421.578 kb on + strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.579 kb on - strand at 1421.581 kb on - strand at 1421.608 kb on + strand at 1421.609 kb on - strand at 1421.610 kb on + strand at 1421.610 kb on + strand at 1421.610 kb on + strand at 1421.610 kb on + strand at 1421.611 kb on - strand at 1421.611 kb on - strand at 1421.611 kb on - strand at 1421.611 kb on - strand at 1421.691 kb on + strand at 1421.738 kb on + strand at 1421.738 kb on + strand at 1421.738 kb on + strand at 1421.739 kb on - strand at 1421.747 kb on + strand at 1421.748 kb on - strand at 1421.762 kb on + strand at 1421.762 kb on + strand at 1421.814 kb on + strand at 1421.814 kb on + strand at 1421.847 kb on + strand, within Psyr_1263 at 1421.848 kb on - strand, within Psyr_1263 at 1421.848 kb on - strand, within Psyr_1263 at 1421.848 kb on - strand, within Psyr_1263 at 1421.883 kb on - strand, within Psyr_1263 at 1421.907 kb on - strand, within Psyr_1263 at 1421.935 kb on + strand, within Psyr_1263 at 1421.936 kb on - strand, within Psyr_1263 at 1422.007 kb on + strand, within Psyr_1263 at 1422.018 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.257 kb on + strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263 at 1422.258 kb on - strand, within Psyr_1263
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Erythromycin 6.25 ug/ml remove 1,419,583 + -0.6 1,419,640 + +0.3 1,419,640 + -1.0 1,419,640 + -0.2 1,419,640 + -1.1 1,419,644 + +1.4 1,421,426 + -1.2 1,421,426 + -0.2 1,421,477 - +0.4 1,421,496 - +0.2 1,421,521 - -1.8 1,421,521 - -0.2 1,421,521 - -0.5 1,421,521 - +1.7 1,421,521 - +1.2 1,421,531 - +0.3 1,421,569 + +0.4 1,421,570 - -0.0 1,421,578 + +0.0 1,421,578 + +1.0 1,421,578 + -0.5 1,421,578 + +0.7 1,421,579 - -0.6 1,421,579 - +0.3 1,421,579 - -1.0 1,421,579 - -0.4 1,421,579 - +3.1 1,421,579 - +0.7 1,421,579 - -1.6 1,421,579 - -0.3 1,421,581 - -0.9 1,421,608 + -0.8 1,421,609 - +0.0 1,421,610 + -0.8 1,421,610 + -1.3 1,421,610 + -1.0 1,421,610 + -0.3 1,421,611 - -2.3 1,421,611 - +0.4 1,421,611 - +0.0 1,421,611 - -0.0 1,421,691 + +0.5 1,421,738 + -1.2 1,421,738 + -0.2 1,421,738 + -1.6 1,421,739 - -2.6 1,421,747 + -0.3 1,421,748 - +1.1 1,421,762 + +0.2 1,421,762 + +0.5 1,421,814 + -0.6 1,421,814 + +1.4 1,421,847 + Psyr_1263 0.10 -0.2 1,421,848 - Psyr_1263 0.10 -0.4 1,421,848 - Psyr_1263 0.10 -0.4 1,421,848 - Psyr_1263 0.10 -0.7 1,421,883 - Psyr_1263 0.11 +0.1 1,421,907 - Psyr_1263 0.11 -0.6 1,421,935 + Psyr_1263 0.12 +0.6 1,421,936 - Psyr_1263 0.12 +0.2 1,422,007 + Psyr_1263 0.14 -0.5 1,422,018 + Psyr_1263 0.14 -0.0 1,422,257 + Psyr_1263 0.19 +1.0 1,422,257 + Psyr_1263 0.19 -0.2 1,422,257 + Psyr_1263 0.19 -0.3 1,422,257 + Psyr_1263 0.19 -0.4 1,422,257 + Psyr_1263 0.19 +0.4 1,422,257 + Psyr_1263 0.19 -1.0 1,422,257 + Psyr_1263 0.19 +0.9 1,422,257 + Psyr_1263 0.19 +0.2 1,422,258 - Psyr_1263 0.19 -1.0 1,422,258 - Psyr_1263 0.19 -0.2 1,422,258 - Psyr_1263 0.19 +0.2 1,422,258 - Psyr_1263 0.19 -0.6 1,422,258 - Psyr_1263 0.19 +1.7 1,422,258 - Psyr_1263 0.19 +1.4 1,422,258 - Psyr_1263 0.19 -0.2 1,422,258 - Psyr_1263 0.19 -0.7 1,422,258 - Psyr_1263 0.19 +0.1 1,422,258 - Psyr_1263 0.19 -0.6
Or see this region's nucleotide sequence