Experiment: L-Valine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_904 and PfGW456L13_905 are separated by 194 nucleotides PfGW456L13_905 and PfGW456L13_906 are separated by 68 nucleotides PfGW456L13_906 and PfGW456L13_907 are separated by 8 nucleotides
PfGW456L13_904 - Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2), at 1,011,571 to 1,014,444
_904
PfGW456L13_905 - Ribonucleotide reductase, alpha subunit, at 1,014,639 to 1,014,956
_905
PfGW456L13_906 - Putative activity regulator of membrane protease YbbK, at 1,015,025 to 1,015,474
_906
PfGW456L13_907 - Putative stomatin/prohibitin-family membrane protease subunit YbbK, at 1,015,483 to 1,016,403
_907
Position (kb)
1015
1016 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1014.082 kb on + strand, within PfGW456L13_904 at 1014.228 kb on + strand at 1014.229 kb on - strand at 1014.229 kb on - strand at 1014.229 kb on - strand at 1014.229 kb on - strand at 1014.270 kb on + strand at 1014.270 kb on + strand at 1014.270 kb on + strand at 1014.270 kb on + strand at 1014.271 kb on - strand at 1014.271 kb on - strand at 1014.271 kb on - strand at 1014.271 kb on - strand at 1014.307 kb on + strand at 1014.307 kb on + strand at 1014.307 kb on + strand at 1014.308 kb on - strand at 1014.308 kb on - strand at 1014.308 kb on - strand at 1014.358 kb on + strand at 1014.358 kb on + strand at 1014.359 kb on - strand at 1014.359 kb on - strand at 1014.359 kb on - strand at 1014.391 kb on + strand at 1014.391 kb on + strand at 1014.391 kb on + strand at 1014.436 kb on + strand at 1014.461 kb on + strand at 1014.461 kb on + strand at 1014.461 kb on + strand at 1014.461 kb on + strand at 1014.462 kb on - strand at 1014.462 kb on - strand at 1014.462 kb on - strand at 1014.462 kb on - strand at 1014.519 kb on - strand at 1014.838 kb on + strand, within PfGW456L13_905 at 1014.838 kb on + strand, within PfGW456L13_905 at 1014.839 kb on - strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.876 kb on - strand, within PfGW456L13_905 at 1014.876 kb on - strand, within PfGW456L13_905 at 1014.983 kb on - strand at 1015.026 kb on + strand at 1015.027 kb on - strand at 1015.027 kb on - strand at 1015.027 kb on - strand at 1015.263 kb on + strand, within PfGW456L13_906 at 1015.264 kb on - strand, within PfGW456L13_906 at 1015.264 kb on - strand, within PfGW456L13_906 at 1015.418 kb on + strand, within PfGW456L13_906 at 1015.418 kb on + strand, within PfGW456L13_906 at 1015.419 kb on - strand, within PfGW456L13_906 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.640 kb on + strand, within PfGW456L13_907 at 1015.640 kb on + strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1016.175 kb on + strand, within PfGW456L13_907 at 1016.197 kb on - strand, within PfGW456L13_907 at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (C) remove 1,014,082 + PfGW456L13_904 0.87 +0.6 1,014,228 + +0.6 1,014,229 - +1.0 1,014,229 - -1.1 1,014,229 - +1.2 1,014,229 - +0.8 1,014,270 + -2.0 1,014,270 + +0.2 1,014,270 + +0.3 1,014,270 + -0.8 1,014,271 - -0.3 1,014,271 - +0.2 1,014,271 - -0.3 1,014,271 - -1.8 1,014,307 + +1.4 1,014,307 + -2.0 1,014,307 + -1.1 1,014,308 - +0.7 1,014,308 - +0.3 1,014,308 - +0.3 1,014,358 + -1.0 1,014,358 + -0.3 1,014,359 - +0.5 1,014,359 - -0.5 1,014,359 - -0.6 1,014,391 + +1.1 1,014,391 + +0.1 1,014,391 + -0.4 1,014,436 + -1.6 1,014,461 + -0.8 1,014,461 + +0.4 1,014,461 + -0.1 1,014,461 + +0.7 1,014,462 - +0.1 1,014,462 - -0.1 1,014,462 - +0.3 1,014,462 - +1.1 1,014,519 - +0.6 1,014,838 + PfGW456L13_905 0.63 -0.0 1,014,838 + PfGW456L13_905 0.63 -0.4 1,014,839 - PfGW456L13_905 0.63 +0.6 1,014,866 + PfGW456L13_905 0.71 -0.2 1,014,866 + PfGW456L13_905 0.71 +0.0 1,014,866 + PfGW456L13_905 0.71 +0.2 1,014,866 + PfGW456L13_905 0.71 -2.6 1,014,866 + PfGW456L13_905 0.71 -0.5 1,014,867 - PfGW456L13_905 0.72 -0.7 1,014,867 - PfGW456L13_905 0.72 -0.2 1,014,867 - PfGW456L13_905 0.72 +0.3 1,014,867 - PfGW456L13_905 0.72 -0.1 1,014,867 - PfGW456L13_905 0.72 +0.3 1,014,867 - PfGW456L13_905 0.72 +1.3 1,014,876 - PfGW456L13_905 0.75 -0.3 1,014,876 - PfGW456L13_905 0.75 -0.7 1,014,983 - -0.2 1,015,026 + -0.0 1,015,027 - -2.5 1,015,027 - +0.7 1,015,027 - +0.3 1,015,263 + PfGW456L13_906 0.53 +0.1 1,015,264 - PfGW456L13_906 0.53 +0.6 1,015,264 - PfGW456L13_906 0.53 +0.6 1,015,418 + PfGW456L13_906 0.87 +1.3 1,015,418 + PfGW456L13_906 0.87 -0.5 1,015,419 - PfGW456L13_906 0.88 -3.1 1,015,622 + PfGW456L13_907 0.15 +0.6 1,015,622 + PfGW456L13_907 0.15 +1.0 1,015,622 + PfGW456L13_907 0.15 -0.6 1,015,622 + PfGW456L13_907 0.15 +1.4 1,015,622 + PfGW456L13_907 0.15 -0.6 1,015,623 - PfGW456L13_907 0.15 -1.1 1,015,623 - PfGW456L13_907 0.15 -1.3 1,015,623 - PfGW456L13_907 0.15 -1.2 1,015,623 - PfGW456L13_907 0.15 -1.4 1,015,623 - PfGW456L13_907 0.15 +0.5 1,015,623 - PfGW456L13_907 0.15 -2.2 1,015,640 + PfGW456L13_907 0.17 +0.2 1,015,640 + PfGW456L13_907 0.17 -0.6 1,015,641 - PfGW456L13_907 0.17 -0.0 1,015,641 - PfGW456L13_907 0.17 +0.8 1,015,641 - PfGW456L13_907 0.17 +0.8 1,015,641 - PfGW456L13_907 0.17 -1.1 1,016,175 + PfGW456L13_907 0.75 +0.4 1,016,197 - PfGW456L13_907 0.78 -0.7 1,016,454 + +0.2 1,016,454 + -0.6 1,016,454 + +0.2 1,016,454 + -0.3 1,016,454 + +0.6 1,016,454 + +0.8 1,016,455 - -0.4 1,016,455 - -0.1 1,016,455 - +0.2 1,016,455 - +0.2 1,016,455 - +0.2 1,016,455 - -0.8 1,016,455 - -0.2
Or see this region's nucleotide sequence