Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2142

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
2,343,472	+		PfGW456L13_2140	0.26	+0.8
2,343,473	-		PfGW456L13_2140	0.26	-2.4
2,343,502	+		PfGW456L13_2140	0.30	-0.3
2,343,503	-		PfGW456L13_2140	0.30	+0.4
2,343,503	-		PfGW456L13_2140	0.30	+1.4
2,343,509	-		PfGW456L13_2140	0.30	+0.3
2,343,509	-		PfGW456L13_2140	0.30	-1.0
2,343,509	-		PfGW456L13_2140	0.30	+1.1
2,343,523	+		PfGW456L13_2140	0.32	+0.4
2,343,841	+		PfGW456L13_2140	0.71	-0.0
2,343,842	-		PfGW456L13_2140	0.71	-0.0
2,343,843	+		PfGW456L13_2140	0.71	+1.0
2,343,844	-		PfGW456L13_2140	0.72	-0.2
2,343,844	-		PfGW456L13_2140	0.72	-0.3
2,343,974	-		PfGW456L13_2140	0.88	-0.6
2,344,124	+				+0.7
2,344,125	-				-2.4
2,344,177	+				-0.6
2,344,177	+				-0.3
2,344,178	-				-2.2
2,344,187	+				-0.4
2,344,216	-		PfGW456L13_2141	0.26	-3.7
2,344,246	+		PfGW456L13_2141	0.53	-0.6
2,344,247	-		PfGW456L13_2141	0.54	-1.3
2,344,294	+				-0.0
2,344,295	-				-0.1
2,344,302	+				-1.9
2,344,302	+				-1.1
2,344,302	+				-2.2
2,344,302	+				-0.9
2,344,302	+				-3.6
2,344,302	+				-1.9
2,344,302	+				-0.9
2,344,302	+				-1.8
2,344,303	-				-2.3
2,344,303	-				-2.3
2,344,303	-				-1.7
2,344,303	-				-0.6
2,344,303	-				-0.0
2,344,303	-				-1.6
2,344,303	-				-2.0
2,344,303	-				-4.0
2,344,342	+				-1.3
2,344,342	+				-2.5
2,344,343	-				-1.0
2,344,343	-				-2.6
2,344,343	-				-1.4
2,344,423	+		PfGW456L13_2142	0.10	-3.0
2,344,423	+		PfGW456L13_2142	0.10	-1.9
2,344,474	+		PfGW456L13_2142	0.14	-2.5
2,344,474	+		PfGW456L13_2142	0.14	-2.4
2,344,475	-		PfGW456L13_2142	0.14	-2.2
2,344,477	+		PfGW456L13_2142	0.14	-1.3
2,344,477	+		PfGW456L13_2142	0.14	-1.2
2,344,477	+		PfGW456L13_2142	0.14	-1.4
2,344,477	+		PfGW456L13_2142	0.14	-1.8
2,344,477	+		PfGW456L13_2142	0.14	-1.2
2,344,477	+		PfGW456L13_2142	0.14	-1.6
2,344,477	+		PfGW456L13_2142	0.14	-2.6
2,344,478	-		PfGW456L13_2142	0.14	-3.9
2,344,478	-		PfGW456L13_2142	0.14	-0.2
2,344,478	-		PfGW456L13_2142	0.14	-0.6
2,344,478	-		PfGW456L13_2142	0.14	-1.5
2,344,478	-		PfGW456L13_2142	0.14	-0.6
2,344,478	-		PfGW456L13_2142	0.14	-0.4
2,344,478	-		PfGW456L13_2142	0.14	-1.4
2,344,478	-		PfGW456L13_2142	0.14	-0.8
2,344,478	-		PfGW456L13_2142	0.14	-1.9
2,344,478	-		PfGW456L13_2142	0.14	-1.9
2,344,636	+		PfGW456L13_2142	0.25	-1.0
2,344,708	+		PfGW456L13_2142	0.30	-3.2
2,344,708	+		PfGW456L13_2142	0.30	-2.1
2,344,708	+		PfGW456L13_2142	0.30	+0.7
2,344,708	+		PfGW456L13_2142	0.30	-3.4
2,344,708	+		PfGW456L13_2142	0.30	-2.0
2,344,709	-		PfGW456L13_2142	0.30	-1.3
2,344,709	-		PfGW456L13_2142	0.30	-2.4
2,344,709	-		PfGW456L13_2142	0.30	-0.8
2,344,709	-		PfGW456L13_2142	0.30	-1.4
2,344,709	-		PfGW456L13_2142	0.30	-1.5
2,344,709	-		PfGW456L13_2142	0.30	-1.7
2,344,709	-		PfGW456L13_2142	0.30	-1.2
2,344,709	-		PfGW456L13_2142	0.30	-2.0
2,344,888	+		PfGW456L13_2142	0.42	-1.0
2,344,888	+		PfGW456L13_2142	0.42	-1.6
2,344,889	-		PfGW456L13_2142	0.43	-2.6
2,344,889	-		PfGW456L13_2142	0.43	-1.2
2,344,889	-		PfGW456L13_2142	0.43	-1.3
2,344,889	-		PfGW456L13_2142	0.43	-1.2
2,345,127	+		PfGW456L13_2142	0.59	-3.1
2,345,127	+		PfGW456L13_2142	0.59	-1.5
2,345,127	+		PfGW456L13_2142	0.59	-1.0
2,345,128	-		PfGW456L13_2142	0.59	-1.4
2,345,128	-		PfGW456L13_2142	0.59	-0.3
2,345,131	+		PfGW456L13_2142	0.59	-3.0
2,345,131	+		PfGW456L13_2142	0.59	-1.3
2,345,132	-		PfGW456L13_2142	0.59	-1.9
2,345,132	-		PfGW456L13_2142	0.59	-0.0
2,345,132	-		PfGW456L13_2142	0.59	-2.5
2,345,132	-		PfGW456L13_2142	0.59	-1.8
2,345,179	+		PfGW456L13_2142	0.63	-1.9
2,345,180	-		PfGW456L13_2142	0.63	-1.7
2,345,180	-		PfGW456L13_2142	0.63	-1.5
2,345,180	-		PfGW456L13_2142	0.63	-1.1
2,345,203	+		PfGW456L13_2142	0.64	-1.6
2,345,203	+		PfGW456L13_2142	0.64	-1.2
2,345,203	+		PfGW456L13_2142	0.64	-2.1
2,345,203	+		PfGW456L13_2142	0.64	-3.0
2,345,203	+		PfGW456L13_2142	0.64	+0.4
2,345,203	+		PfGW456L13_2142	0.64	-0.9
2,345,204	-		PfGW456L13_2142	0.64	-2.2
2,345,204	-		PfGW456L13_2142	0.64	-0.7
2,345,204	-		PfGW456L13_2142	0.64	-1.0
2,345,204	-		PfGW456L13_2142	0.64	-1.3
2,345,204	-		PfGW456L13_2142	0.64	-2.5
2,345,269	+		PfGW456L13_2142	0.69	-1.7
2,345,269	+		PfGW456L13_2142	0.69	-1.5
2,345,269	+		PfGW456L13_2142	0.69	-0.9
2,345,270	-		PfGW456L13_2142	0.69	-1.6
2,345,270	-		PfGW456L13_2142	0.69	-0.4
2,345,270	-		PfGW456L13_2142	0.69	-1.6
2,345,270	-		PfGW456L13_2142	0.69	-2.3
2,345,440	+		PfGW456L13_2142	0.81	-0.7
2,345,440	+		PfGW456L13_2142	0.81	-1.8
2,345,441	-		PfGW456L13_2142	0.81	-2.0
2,345,441	-		PfGW456L13_2142	0.81	-1.7
2,345,441	-		PfGW456L13_2142	0.81	-0.6
2,345,441	-		PfGW456L13_2142	0.81	-2.0
2,345,714	-				-0.4
2,345,714	-				+0.7
2,345,760	+				+0.2
2,345,760	+				-0.8
2,345,760	+				-2.2
2,345,760	+				+0.6
2,345,760	+				+0.8
2,345,760	+				+0.9
2,345,761	-				-0.2
2,345,761	-				-0.7
2,345,761	-				-0.4
2,345,761	-				+2.0
2,345,761	-				-3.1
2,345,793	+				-0.4
2,345,793	+				+0.2
2,345,793	+				-0.3
2,345,793	+				-0.1
2,345,793	+				-0.3
2,345,794	-				-0.7
2,345,794	-				+0.4
2,345,794	-				+0.0
2,345,847	-		PfGW456L13_2143	0.11	-0.5
2,345,891	+		PfGW456L13_2143	0.20	-1.0
2,345,954	+		PfGW456L13_2143	0.33	+0.4
2,346,041	+		PfGW456L13_2143	0.51	-0.4
2,346,041	+		PfGW456L13_2143	0.51	+0.5
2,346,041	+		PfGW456L13_2143	0.51	-0.0
2,346,042	-		PfGW456L13_2143	0.51	-0.8
2,346,273	+				+1.1
2,346,364	+				-1.0
2,346,369	+				-0.3
2,346,384	-				-0.7
2,346,390	+				-0.4
2,346,391	-				-1.3
2,346,507	+				+0.7
2,346,507	+				+1.8
2,346,508	-				+0.6
2,346,571	-		PfGW456L13_2144	0.33	-1.6
2,346,704	+				+0.1
2,346,704	+				+1.8
2,346,705	-				-2.0
2,346,705	-				-0.0