Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1087

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,207,354	+		PfGW456L13_1086	0.20	-0.1
1,207,354	+		PfGW456L13_1086	0.20	-0.9
1,207,466	+		PfGW456L13_1086	0.30	+1.0
1,207,466	+		PfGW456L13_1086	0.30	-0.8
1,207,466	+		PfGW456L13_1086	0.30	+0.3
1,207,466	+		PfGW456L13_1086	0.30	+0.2
1,207,466	+		PfGW456L13_1086	0.30	+0.3
1,207,466	+		PfGW456L13_1086	0.30	-0.1
1,207,467	-		PfGW456L13_1086	0.30	+0.7
1,207,467	-		PfGW456L13_1086	0.30	-0.3
1,207,467	-		PfGW456L13_1086	0.30	+0.7
1,207,467	-		PfGW456L13_1086	0.30	-0.6
1,207,506	+		PfGW456L13_1086	0.33	-0.6
1,207,507	-		PfGW456L13_1086	0.33	-0.2
1,207,507	-		PfGW456L13_1086	0.33	+1.1
1,207,507	-		PfGW456L13_1086	0.33	-1.5
1,207,507	-		PfGW456L13_1086	0.33	-2.8
1,207,548	+		PfGW456L13_1086	0.37	+0.6
1,207,548	+		PfGW456L13_1086	0.37	+0.4
1,207,548	+		PfGW456L13_1086	0.37	+0.0
1,207,548	+		PfGW456L13_1086	0.37	+0.5
1,207,549	-		PfGW456L13_1086	0.37	-0.7
1,207,549	-		PfGW456L13_1086	0.37	+1.7
1,207,549	-		PfGW456L13_1086	0.37	+1.2
1,207,623	-		PfGW456L13_1086	0.43	-0.4
1,207,628	+		PfGW456L13_1086	0.44	-1.5
1,207,628	+		PfGW456L13_1086	0.44	-3.4
1,207,628	+		PfGW456L13_1086	0.44	+0.5
1,207,628	+		PfGW456L13_1086	0.44	-0.1
1,207,629	-		PfGW456L13_1086	0.44	+0.2
1,207,629	-		PfGW456L13_1086	0.44	-0.6
1,207,780	+		PfGW456L13_1086	0.56	+0.8
1,207,781	-		PfGW456L13_1086	0.56	+0.4
1,207,781	-		PfGW456L13_1086	0.56	-0.1
1,207,781	-		PfGW456L13_1086	0.56	+0.8
1,207,781	-		PfGW456L13_1086	0.56	+0.9
1,207,838	+		PfGW456L13_1086	0.61	-0.8
1,207,838	+		PfGW456L13_1086	0.61	+0.5
1,207,838	+		PfGW456L13_1086	0.61	-1.2
1,207,839	-		PfGW456L13_1086	0.61	+1.3
1,207,839	-		PfGW456L13_1086	0.61	-0.7
1,207,839	-		PfGW456L13_1086	0.61	-0.6
1,207,839	-		PfGW456L13_1086	0.61	-1.4
1,207,839	-		PfGW456L13_1086	0.61	+0.1
1,207,839	-		PfGW456L13_1086	0.61	+0.4
1,207,839	-		PfGW456L13_1086	0.61	+0.3
1,207,839	-		PfGW456L13_1086	0.61	+0.2
1,207,839	-		PfGW456L13_1086	0.61	+0.8
1,208,260	+				+1.2
1,208,260	+				+0.9
1,208,260	+				-2.2
1,208,260	+				+0.7
1,208,261	-				-0.1
1,208,284	+				-0.6
1,208,284	+				-0.4
1,208,285	-				-1.1
1,208,285	-				-1.2
1,208,305	+				+0.3
1,208,356	+				-0.5
1,208,356	+				-1.0
1,208,356	+				+0.6
1,208,357	-				+0.5
1,208,357	-				-0.6
1,208,357	-				+0.4
1,208,357	-				+0.4
1,208,401	-		PfGW456L13_1087	0.13	-1.8
1,208,401	-		PfGW456L13_1087	0.13	+0.4
1,208,401	-		PfGW456L13_1087	0.13	+1.4
1,208,610	+		PfGW456L13_1087	0.38	+0.5
1,208,618	+		PfGW456L13_1087	0.39	-1.6
1,208,619	-		PfGW456L13_1087	0.39	+0.1
1,208,619	-		PfGW456L13_1087	0.39	-0.3
1,208,619	-		PfGW456L13_1087	0.39	-0.3
1,208,714	+		PfGW456L13_1087	0.50	-1.5
1,208,715	-		PfGW456L13_1087	0.50	+0.5
1,208,715	-		PfGW456L13_1087	0.50	-0.4
1,208,715	-		PfGW456L13_1087	0.50	-2.3
1,208,761	+		PfGW456L13_1087	0.56	-0.0
1,208,766	+		PfGW456L13_1087	0.56	+1.2
1,208,766	+		PfGW456L13_1087	0.56	+1.2
1,208,766	+		PfGW456L13_1087	0.56	+1.4
1,208,767	-		PfGW456L13_1087	0.56	+0.0
1,208,767	-		PfGW456L13_1087	0.56	+0.9
1,208,768	+		PfGW456L13_1087	0.57	-0.4
1,208,768	+		PfGW456L13_1087	0.57	+0.3
1,208,768	+		PfGW456L13_1087	0.57	-0.8
1,208,768	+		PfGW456L13_1087	0.57	+0.6
1,208,768	+		PfGW456L13_1087	0.57	+0.1
1,208,769	-		PfGW456L13_1087	0.57	+0.6
1,208,769	-		PfGW456L13_1087	0.57	+1.1
1,208,769	-		PfGW456L13_1087	0.57	-0.7
1,208,934	+		PfGW456L13_1087	0.76	+1.3
1,208,934	+		PfGW456L13_1087	0.76	+1.1
1,208,934	+		PfGW456L13_1087	0.76	+0.5
1,208,934	+		PfGW456L13_1087	0.76	+1.3
1,208,934	+		PfGW456L13_1087	0.76	-0.8
1,208,935	-		PfGW456L13_1087	0.76	-0.1
1,208,935	-		PfGW456L13_1087	0.76	+0.8
1,208,935	-		PfGW456L13_1087	0.76	+1.4
1,208,935	-		PfGW456L13_1087	0.76	-1.7
1,208,935	-		PfGW456L13_1087	0.76	-1.5
1,208,935	-		PfGW456L13_1087	0.76	-0.1
1,208,935	-		PfGW456L13_1087	0.76	+1.2
1,208,935	-		PfGW456L13_1087	0.76	-1.0
1,208,957	-		PfGW456L13_1087	0.79	+0.1
1,208,957	-		PfGW456L13_1087	0.79	+0.5
1,208,977	+		PfGW456L13_1087	0.81	+1.0
1,209,101	+				+0.2
1,209,102	-				+0.8
1,209,102	-				-0.1
1,209,102	-				+0.2
1,209,102	-				-0.7
1,209,109	+				+1.7
1,209,109	+				-0.5
1,209,110	-				+0.9
1,209,138	+				-0.8
1,209,138	+				+0.2
1,209,138	+				-0.6
1,209,139	-				+0.9
1,209,139	-				+1.0
1,209,163	+				-0.1
1,209,163	+				-0.3
1,209,164	-				+1.0
1,209,195	+				+0.1
1,209,195	+				-1.7
1,209,204	-				+0.2
1,209,506	+		PfGW456L13_1088	0.32	-0.7
1,209,506	+		PfGW456L13_1088	0.32	+0.9
1,209,507	-		PfGW456L13_1088	0.32	-2.1
1,209,716	+		PfGW456L13_1088	0.54	+0.1
1,209,782	+		PfGW456L13_1088	0.61	-0.7
1,209,809	+		PfGW456L13_1088	0.64	+0.1
1,209,809	+		PfGW456L13_1088	0.64	+1.5
1,209,809	+		PfGW456L13_1088	0.64	-0.5
1,209,809	+		PfGW456L13_1088	0.64	+0.4
1,209,810	-		PfGW456L13_1088	0.64	-1.5
1,209,810	-		PfGW456L13_1088	0.64	+1.0
1,209,836	-		PfGW456L13_1088	0.67	+0.1
1,209,944	+		PfGW456L13_1088	0.78	+0.3
1,209,944	+		PfGW456L13_1088	0.78	+1.4
1,209,944	+		PfGW456L13_1088	0.78	-2.5
1,209,944	+		PfGW456L13_1088	0.78	-0.5
1,209,945	-		PfGW456L13_1088	0.78	+1.3
1,209,945	-		PfGW456L13_1088	0.78	+0.7
1,209,945	-		PfGW456L13_1088	0.78	-0.3
1,209,983	+		PfGW456L13_1088	0.82	-0.5
1,209,984	-		PfGW456L13_1088	0.82	-0.3
1,209,984	-		PfGW456L13_1088	0.82	+1.1
1,210,060	+				+0.5
1,210,060	+				-1.2
1,210,061	-				-1.5
1,210,065	+				+0.7
1,210,110	+				-1.0
1,210,110	+				+0.8
1,210,110	+				-1.3
1,210,110	+				+0.8
1,210,110	+				+0.0
1,210,110	+				-1.4
1,210,111	-				+0.1
1,210,111	-				+0.2