Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28045

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
6,245,914	+		PFLU_RS28035	0.68	+0.1
6,245,915	-		PFLU_RS28035	0.68	+0.6
6,246,047	+		PFLU_RS28035	0.86	+0.6
6,246,209	+				-0.3
6,246,209	+				+0.4
6,246,209	+				-0.3
6,246,209	+				-1.0
6,246,210	-				-1.4
6,246,210	-				-0.2
6,246,215	+				-0.4
6,246,215	+				-0.5
6,246,215	+				-1.0
6,246,215	+				+0.5
6,246,215	+				+0.5
6,246,216	-				+0.2
6,246,216	-				-1.1
6,246,226	-				-0.0
6,246,226	-				+2.2
6,246,286	+				-1.5
6,246,286	+				+0.4
6,246,286	+				+0.3
6,246,286	+				+0.4
6,246,286	+				-0.6
6,246,287	-				+0.8
6,246,287	-				+0.3
6,246,296	-				+0.5
6,246,296	-				-1.0
6,246,318	+				+1.2
6,246,318	+				+1.2
6,246,318	+				-1.1
6,246,318	+				+0.6
6,246,318	+				+0.3
6,246,319	-				-0.2
6,246,319	-				+1.7
6,246,319	-				-0.7
6,246,340	+				-3.2
6,246,340	+				+0.5
6,246,340	+				-0.1
6,246,341	-				+0.3
6,246,341	-				+0.3
6,246,408	+		PFLU_RS28040	0.12	+0.5
6,246,408	+		PFLU_RS28040	0.12	+1.1
6,246,409	-		PFLU_RS28040	0.12	-0.0
6,246,409	-		PFLU_RS28040	0.12	+0.0
6,246,409	-		PFLU_RS28040	0.12	+0.6
6,246,409	-		PFLU_RS28040	0.12	-0.2
6,246,409	-		PFLU_RS28040	0.12	+0.4
6,246,463	-		PFLU_RS28040	0.24	-0.3
6,246,540	+		PFLU_RS28040	0.41	+0.4
6,246,541	-		PFLU_RS28040	0.41	+0.3
6,246,541	-		PFLU_RS28040	0.41	+0.4
6,246,541	-		PFLU_RS28040	0.41	+1.7
6,246,544	+		PFLU_RS28040	0.42	+0.6
6,246,544	+		PFLU_RS28040	0.42	-0.5
6,246,544	+		PFLU_RS28040	0.42	-0.4
6,246,545	-		PFLU_RS28040	0.42	+0.2
6,246,545	-		PFLU_RS28040	0.42	-0.0
6,246,545	-		PFLU_RS28040	0.42	-2.5
6,246,545	-		PFLU_RS28040	0.42	-2.7
6,246,545	-		PFLU_RS28040	0.42	-1.2
6,246,671	+		PFLU_RS28040	0.70	+0.2
6,246,671	+		PFLU_RS28040	0.70	-0.2
6,246,671	+		PFLU_RS28040	0.70	-0.8
6,246,672	-		PFLU_RS28040	0.70	-2.7
6,246,672	-		PFLU_RS28040	0.70	+0.2
6,246,672	-		PFLU_RS28040	0.70	+1.1
6,246,672	-		PFLU_RS28040	0.70	-0.1
6,246,673	+		PFLU_RS28040	0.70	-0.1
6,246,673	+		PFLU_RS28040	0.70	+1.0
6,246,673	+		PFLU_RS28040	0.70	+0.1
6,246,674	-		PFLU_RS28040	0.71	+0.5
6,246,674	-		PFLU_RS28040	0.71	+0.8
6,246,674	-		PFLU_RS28040	0.71	+0.4
6,246,723	+		PFLU_RS28040	0.81	+0.5
6,246,724	-		PFLU_RS28040	0.82	+0.6
6,246,724	-		PFLU_RS28040	0.82	+0.9
6,246,726	+		PFLU_RS28040	0.82	+0.1
6,246,726	+		PFLU_RS28040	0.82	-0.5
6,246,726	+		PFLU_RS28040	0.82	-2.2
6,246,726	+		PFLU_RS28040	0.82	-0.6
6,246,726	+		PFLU_RS28040	0.82	-1.2
6,246,726	+		PFLU_RS28040	0.82	-0.0
6,246,727	-		PFLU_RS28040	0.82	-1.4
6,246,727	-		PFLU_RS28040	0.82	+0.0
6,246,727	-		PFLU_RS28040	0.82	+0.2
6,246,762	+				-0.1
6,246,762	+				-1.0
6,246,762	+				-0.1
6,246,762	+				+0.5
6,246,763	-				-0.1
6,246,763	-				-0.7
6,246,763	-				+1.6
6,246,776	+				+0.3
6,246,776	+				-0.9
6,246,777	-				-0.5
6,246,786	-				-0.4
6,246,787	+				-0.3
6,246,787	+				-0.5
6,246,787	+				+0.5
6,246,787	+				-0.3
6,246,787	+				+1.4
6,246,787	+				-0.9
6,246,787	+				+0.2
6,246,787	+				+0.3
6,246,788	-				+0.9
6,246,788	-				-1.1
6,246,788	-				-0.4
6,246,788	-				-0.0
6,246,788	-				+0.7
6,246,788	-				-1.0
6,246,788	-				+0.3
6,246,788	-				-1.2
6,246,788	-				-0.3
6,246,788	-				+1.4
6,246,847	-				-0.4
6,246,847	-				+0.3
6,246,847	-				-1.3
6,246,847	-				-0.2
6,246,847	-				+0.3
6,246,884	+				-0.1
6,247,075	+		PFLU_RS28045	0.55	-0.5
6,247,075	+		PFLU_RS28045	0.55	+1.0
6,247,076	-		PFLU_RS28045	0.56	-0.4
6,247,155	+		PFLU_RS28045	0.82	-0.7
6,247,164	+		PFLU_RS28045	0.85	+0.6
6,247,164	+		PFLU_RS28045	0.85	+0.0
6,247,164	+		PFLU_RS28045	0.85	+0.4
6,247,164	+		PFLU_RS28045	0.85	-0.8
6,247,164	+		PFLU_RS28045	0.85	+1.0
6,247,164	+		PFLU_RS28045	0.85	+1.9
6,247,164	+		PFLU_RS28045	0.85	+1.6
6,247,165	-		PFLU_RS28045	0.86	+0.9
6,247,165	-		PFLU_RS28045	0.86	+0.9
6,247,165	-		PFLU_RS28045	0.86	+0.6
6,247,165	-		PFLU_RS28045	0.86	-0.6
6,247,165	-		PFLU_RS28045	0.86	+0.8
6,247,165	-		PFLU_RS28045	0.86	-0.3
6,247,165	-		PFLU_RS28045	0.86	+1.0
6,247,262	-				-0.5
6,247,292	-		PFLU_RS28050	0.13	+0.1
6,247,306	+		PFLU_RS28050	0.16	+0.1
6,247,306	+		PFLU_RS28050	0.16	-0.0
6,247,306	+		PFLU_RS28050	0.16	+0.7
6,247,306	+		PFLU_RS28050	0.16	+0.3
6,247,306	+		PFLU_RS28050	0.16	+0.2
6,247,306	+		PFLU_RS28050	0.16	+0.3
6,247,306	+		PFLU_RS28050	0.16	-0.0
6,247,306	+		PFLU_RS28050	0.16	+0.1
6,247,306	+		PFLU_RS28050	0.16	+0.4
6,247,306	+		PFLU_RS28050	0.16	-1.5
6,247,306	+		PFLU_RS28050	0.16	+0.1
6,247,306	+		PFLU_RS28050	0.16	-1.2
6,247,306	+		PFLU_RS28050	0.16	+0.1
6,247,306	+		PFLU_RS28050	0.16	+1.1
6,247,306	+		PFLU_RS28050	0.16	+0.9
6,247,306	+		PFLU_RS28050	0.16	+1.2
6,247,306	+		PFLU_RS28050	0.16	-1.5
6,247,306	+		PFLU_RS28050	0.16	+0.6
6,247,307	-		PFLU_RS28050	0.16	+0.2
6,247,307	-		PFLU_RS28050	0.16	-0.6
6,247,307	-		PFLU_RS28050	0.16	+0.0
6,247,307	-		PFLU_RS28050	0.16	-0.2
6,247,321	+		PFLU_RS28050	0.19	+1.3
6,247,321	+		PFLU_RS28050	0.19	-0.8
6,247,321	+		PFLU_RS28050	0.19	-0.5
6,247,322	-		PFLU_RS28050	0.19	-1.5
6,247,322	-		PFLU_RS28050	0.19	+0.4
6,247,322	-		PFLU_RS28050	0.19	-1.1
6,247,322	-		PFLU_RS28050	0.19	+0.0
6,247,443	-		PFLU_RS28050	0.43	+1.0
6,247,472	+		PFLU_RS28050	0.49	-0.2
6,247,585	+		PFLU_RS28050	0.71	+1.0
6,247,586	-		PFLU_RS28050	0.72	+0.8
6,247,639	+		PFLU_RS28050	0.82	+1.1
6,247,639	+		PFLU_RS28050	0.82	+0.1
6,247,640	-		PFLU_RS28050	0.82	-0.6
6,247,712	-				-0.3
6,247,763	+				+0.3
6,247,764	-				+1.0
6,247,847	+				+1.5
6,247,847	+				+0.0
6,247,848	-				-0.1
6,247,848	-				-0.3
6,247,848	-				+0.6
6,248,104	+		PFLU_RS28055	0.16	+1.1
6,248,105	-		PFLU_RS28055	0.16	+0.5
6,248,105	-		PFLU_RS28055	0.16	+0.9