Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14730

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
3,290,511	+		PFLU_RS14725	0.24	+0.3
3,290,511	+		PFLU_RS14725	0.24	-0.1
3,290,511	+		PFLU_RS14725	0.24	-0.2
3,290,511	+		PFLU_RS14725	0.24	+0.5
3,290,512	-		PFLU_RS14725	0.24	+0.5
3,290,527	-		PFLU_RS14725	0.25	+1.1
3,290,611	-		PFLU_RS14725	0.32	+0.4
3,290,725	+		PFLU_RS14725	0.42	+0.4
3,290,725	+		PFLU_RS14725	0.42	+0.5
3,290,725	+		PFLU_RS14725	0.42	-1.6
3,290,725	+		PFLU_RS14725	0.42	-0.6
3,290,725	+		PFLU_RS14725	0.42	-1.1
3,290,726	-		PFLU_RS14725	0.42	+2.1
3,290,726	-		PFLU_RS14725	0.42	-0.2
3,290,729	+		PFLU_RS14725	0.42	+0.8
3,290,729	+		PFLU_RS14725	0.42	+0.9
3,290,729	+		PFLU_RS14725	0.42	+0.5
3,290,729	+		PFLU_RS14725	0.42	+0.2
3,290,730	-		PFLU_RS14725	0.42	-1.9
3,290,771	+		PFLU_RS14725	0.45	+1.2
3,290,868	-		PFLU_RS14725	0.54	-0.9
3,291,008	-		PFLU_RS14725	0.65	-0.4
3,291,081	-		PFLU_RS14725	0.71	-0.1
3,291,081	-		PFLU_RS14725	0.71	-0.5
3,291,081	-		PFLU_RS14725	0.71	+0.7
3,291,081	-		PFLU_RS14725	0.71	+0.2
3,291,081	-		PFLU_RS14725	0.71	-1.1
3,291,174	+		PFLU_RS14725	0.79	+1.7
3,291,249	-		PFLU_RS14725	0.85	+0.6
3,291,249	-		PFLU_RS14725	0.85	+0.5
3,291,314	+				+0.2
3,291,371	-				-0.6
3,291,469	+				+0.6
3,291,469	+				-0.2
3,291,470	-				+0.8
3,291,555	+		PFLU_RS14730	0.14	-0.1
3,291,555	+		PFLU_RS14730	0.14	+1.2
3,291,555	+		PFLU_RS14730	0.14	-1.3
3,291,555	+		PFLU_RS14730	0.14	-1.6
3,291,555	+		PFLU_RS14730	0.14	+0.3
3,291,555	+		PFLU_RS14730	0.14	-0.9
3,291,574	+		PFLU_RS14730	0.19	+0.1
3,291,574	+		PFLU_RS14730	0.19	+1.2
3,291,726	+		PFLU_RS14730	0.59	-1.4
3,291,726	+		PFLU_RS14730	0.59	-1.5
3,291,726	+		PFLU_RS14730	0.59	+0.0
3,291,727	-		PFLU_RS14730	0.60	+0.2
3,291,727	-		PFLU_RS14730	0.60	+0.2
3,291,732	-		PFLU_RS14730	0.61	-0.6
3,291,843	+				+0.7
3,291,843	+				+0.6
3,291,858	+				-0.3
3,291,858	+				-0.1
3,291,858	+				+0.1
3,291,858	+				-1.6
3,291,859	-				-0.8
3,291,877	+				-0.6
3,291,877	+				+1.4
3,291,877	+				-1.2
3,291,984	+				-0.3
3,291,984	+				-0.4
3,291,984	+				-1.9
3,291,985	-				-0.4
3,292,008	+				+0.5
3,292,008	+				-0.2
3,292,009	-				-0.2
3,292,078	+				-0.6
3,292,079	-				+0.9
3,292,093	+				-0.7
3,292,114	+				+1.4
3,292,114	+				+0.8
3,292,114	+				+0.1
3,292,115	-				-0.4
3,292,115	-				-1.4
3,292,115	-				+1.1
3,292,115	-				-2.5
3,292,115	-				+0.0
3,292,115	-				-1.9
3,292,117	-				-1.2
3,292,117	-				-0.8
3,292,117	-				+0.5
3,292,117	-				-0.8
3,292,212	+				+0.2
3,292,242	-				+0.1
3,292,242	-				+2.0
3,292,303	+				-0.4
3,292,322	+				+0.6
3,292,322	+				-0.5
3,292,322	+				-2.2
3,292,322	+				+0.9
3,292,322	+				+0.6
3,292,323	-				+0.5
3,292,323	-				+0.5
3,292,323	-				+1.2
3,292,323	-				-0.1
3,292,323	-				+0.1
3,292,323	-				+1.5
3,292,323	-				+1.3
3,292,323	-				-0.2
3,292,335	+				+0.5
3,292,335	+				+0.7
3,292,336	-				+0.1
3,292,336	-				+1.7
3,292,402	+				-1.4
3,292,403	-				-0.2
3,292,403	-				-0.1
3,292,403	-				-2.1
3,292,403	-				-0.3
3,292,403	-				-0.1
3,292,418	-		PFLU_RS14735	0.10	+0.9
3,292,461	+		PFLU_RS14735	0.11	+0.5
3,292,461	+		PFLU_RS14735	0.11	+1.2
3,292,461	+		PFLU_RS14735	0.11	+0.1
3,292,461	+		PFLU_RS14735	0.11	-0.2
3,292,461	+		PFLU_RS14735	0.11	-1.6
3,292,461	+		PFLU_RS14735	0.11	+1.5
3,292,461	+		PFLU_RS14735	0.11	-0.6
3,292,462	-		PFLU_RS14735	0.11	+0.9
3,292,462	-		PFLU_RS14735	0.11	+1.4
3,292,462	-		PFLU_RS14735	0.11	+1.7
3,292,462	-		PFLU_RS14735	0.11	+1.5
3,292,462	-		PFLU_RS14735	0.11	+0.5
3,292,462	-		PFLU_RS14735	0.11	-0.6
3,292,465	+		PFLU_RS14735	0.11	-0.5
3,292,465	+		PFLU_RS14735	0.11	-0.4
3,292,465	+		PFLU_RS14735	0.11	-0.5
3,292,466	-		PFLU_RS14735	0.11	+0.9
3,292,569	+		PFLU_RS14735	0.14	-0.1
3,292,570	-		PFLU_RS14735	0.14	+1.0
3,292,570	-		PFLU_RS14735	0.14	+0.6
3,292,570	-		PFLU_RS14735	0.14	+0.2
3,292,570	-		PFLU_RS14735	0.14	+0.8
3,292,570	-		PFLU_RS14735	0.14	+0.1
3,292,573	+		PFLU_RS14735	0.14	+0.9
3,292,574	-		PFLU_RS14735	0.14	+1.1
3,292,574	-		PFLU_RS14735	0.14	-1.6
3,292,574	-		PFLU_RS14735	0.14	+0.3
3,292,574	-		PFLU_RS14735	0.14	-0.8
3,292,613	+		PFLU_RS14735	0.15	-0.1
3,292,614	-		PFLU_RS14735	0.15	+1.3
3,292,614	-		PFLU_RS14735	0.15	+0.2
3,292,614	-		PFLU_RS14735	0.15	-0.6
3,292,614	-		PFLU_RS14735	0.15	-1.4
3,292,614	-		PFLU_RS14735	0.15	-0.2
3,292,614	-		PFLU_RS14735	0.15	-0.1
3,292,656	+		PFLU_RS14735	0.16	-2.2
3,292,656	+		PFLU_RS14735	0.16	-2.2
3,292,663	+		PFLU_RS14735	0.16	+0.7
3,292,671	+		PFLU_RS14735	0.16	+0.5
3,292,672	-		PFLU_RS14735	0.16	-0.4
3,292,672	-		PFLU_RS14735	0.16	+1.1
3,292,745	-		PFLU_RS14735	0.18	-0.1
3,292,745	-		PFLU_RS14735	0.18	-1.6
3,292,761	-		PFLU_RS14735	0.18	-0.3
3,292,792	+		PFLU_RS14735	0.19	-1.2
3,292,794	+		PFLU_RS14735	0.19	-1.4
3,292,794	+		PFLU_RS14735	0.19	+0.2
3,292,794	+		PFLU_RS14735	0.19	-1.1
3,292,795	-		PFLU_RS14735	0.19	+0.3
3,292,795	-		PFLU_RS14735	0.19	-0.3
3,292,795	-		PFLU_RS14735	0.19	-0.2
3,292,795	-		PFLU_RS14735	0.19	-0.6