Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09320

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,060,960	+				+1.0
2,061,015	+				+0.5
2,061,015	+				-0.8
2,061,016	-				+0.6
2,061,019	+				-1.0
2,061,020	-				+1.2
2,061,020	-				-2.2
2,061,020	-				-0.6
2,061,058	+				-0.6
2,061,058	+				-1.0
2,061,058	+				-2.4
2,061,059	-				+1.8
2,061,059	-				+0.4
2,061,059	-				-0.0
2,061,059	-				+0.5
2,061,087	+				-1.0
2,061,087	+				-2.8
2,061,087	+				+0.2
2,061,088	-				-1.0
2,061,088	-				-1.2
2,061,103	-				-0.7
2,061,191	-				+0.8
2,061,267	+				-1.3
2,061,304	+				+0.0
2,061,339	+				-1.1
2,061,339	+				+1.6
2,061,339	+				+0.5
2,061,340	-				-0.1
2,061,340	-				+0.0
2,061,342	+				+0.7
2,061,342	+				+1.1
2,061,342	+				-0.3
2,061,342	+				-0.4
2,061,342	+				+1.0
2,061,343	-				+0.5
2,061,346	-				+0.7
2,061,346	-				+0.6
2,061,370	+				-1.4
2,061,370	+				+1.0
2,061,370	+				-0.4
2,061,370	+				-2.3
2,061,371	-				+0.9
2,061,371	-				-1.5
2,061,371	-				+1.1
2,061,371	-				+0.2
2,061,371	-				-0.8
2,061,371	-				-2.2
2,061,371	-				-0.2
2,061,371	-				-1.3
2,061,371	-				-1.5
2,061,371	-				+1.3
2,061,371	-				-0.6
2,061,371	-				-0.2
2,061,371	-				-0.6
2,061,371	-				-0.2
2,061,371	-				+0.6
2,061,371	-				+0.9
2,061,418	+		PFLU_RS09315	0.15	+0.2
2,061,442	-		PFLU_RS09315	0.24	-1.4
2,061,487	-		PFLU_RS09315	0.41	-1.0
2,061,487	-		PFLU_RS09315	0.41	+0.6
2,061,487	-		PFLU_RS09315	0.41	-1.8
2,061,495	+		PFLU_RS09315	0.44	-0.2
2,061,495	+		PFLU_RS09315	0.44	+0.4
2,061,509	+		PFLU_RS09315	0.50	+0.0
2,061,516	-		PFLU_RS09315	0.52	+0.3
2,061,544	+		PFLU_RS09315	0.63	+0.7
2,061,558	-		PFLU_RS09315	0.68	-0.7
2,061,638	-				+0.5
2,061,644	+				+0.2
2,061,644	+				-0.3
2,061,644	+				+0.1
2,061,644	+				+0.6
2,061,644	+				-1.4
2,061,644	+				-0.1
2,061,644	+				+0.4
2,061,644	+				-0.2
2,061,644	+				+0.4
2,061,644	+				+0.5
2,061,644	+				+1.1
2,061,644	+				+1.1
2,061,644	+				+0.6
2,061,644	+				+0.4
2,061,644	+				+1.0
2,061,644	+				-0.2
2,061,644	+				-0.8
2,061,645	-				+1.4
2,061,645	-				-1.7
2,061,645	-				+1.0
2,061,645	-				+0.3
2,061,645	-				+1.0
2,061,645	-				-1.2
2,061,645	-				+0.8
2,061,645	-				-0.7
2,061,645	-				+0.9
2,061,645	-				-0.5
2,061,645	-				-0.2
2,061,645	-				+1.4
2,061,645	-				+0.1
2,061,645	-				-1.4
2,061,645	-				-0.2
2,061,645	-				-0.4
2,061,645	-				+0.2
2,061,650	+				-0.5
2,061,650	+				-0.8
2,061,650	+				-0.2
2,061,650	+				+1.0
2,061,650	+				-0.4
2,061,650	+				-0.3
2,061,650	+				+0.4
2,061,650	+				+1.2
2,061,650	+				+0.2
2,061,651	-				+0.3
2,061,651	-				+0.5
2,061,651	-				+0.1
2,061,651	-				+0.0
2,061,651	-				+1.5
2,061,659	+				+0.6
2,061,678	+				-1.8
2,061,679	-				-0.4
2,061,679	-				-1.1
2,061,686	-				-0.4
2,061,729	+				+1.0
2,061,729	+				+0.4
2,061,748	+				-0.1
2,061,749	-				-0.5
2,061,749	-				+0.2
2,061,749	-				+0.5
2,061,762	-				-1.0
2,061,880	+				+1.0
2,061,880	+				+1.2
2,061,880	+				-1.2
2,061,880	+				-0.1
2,061,880	+				+0.6
2,061,880	+				+0.2
2,061,880	+				-0.5
2,061,880	+				+0.6
2,061,880	+				+1.6
2,061,880	+				+1.0
2,061,880	+				+0.0
2,061,880	+				-0.8
2,061,881	-				-0.4
2,061,881	-				+0.6
2,061,881	-				-0.8
2,061,881	-				-1.5
2,061,881	-				+1.0
2,061,881	-				-0.1
2,061,881	-				-0.2
2,061,881	-				-1.2
2,061,881	-				+2.4
2,061,881	-				-1.1
2,061,881	-				+0.7
2,061,881	-				+0.1
2,061,881	-				+0.7
2,061,881	-				-0.0
2,061,881	-				+0.1
2,061,881	-				-0.2
2,061,894	+				+1.2
2,061,894	+				-0.2
2,061,895	-				-0.0
2,061,898	+				-0.6
2,061,898	+				+1.0
2,061,898	+				-2.3
2,061,898	+				-0.4
2,061,898	+				+0.2
2,061,898	+				+0.1
2,061,899	-				+0.4
2,061,899	-				+1.3
2,061,899	-				-0.3
2,061,899	-				-1.0
2,061,899	-				+0.9
2,061,899	-				+0.3
2,061,899	-				-0.3
2,061,899	-				-0.2
2,061,899	-				+0.4
2,061,915	+				+1.6
2,061,915	+				-1.0
2,061,915	+				-3.1
2,061,922	+				-1.5
2,061,923	-				-0.6
2,061,946	+				+1.6
2,061,952	+				-1.3
2,061,952	+				-0.2
2,062,079	-		PFLU_RS09320	0.13	+1.4
2,062,143	+		PFLU_RS09320	0.17	-0.7
2,062,144	-		PFLU_RS09320	0.17	-1.0
2,062,173	+		PFLU_RS09320	0.19	-2.2
2,062,174	-		PFLU_RS09320	0.19	-0.4
2,062,174	-		PFLU_RS09320	0.19	-0.5
2,062,189	+		PFLU_RS09320	0.20	-0.6
2,062,189	+		PFLU_RS09320	0.20	+0.6
2,062,190	-		PFLU_RS09320	0.20	+0.4
2,062,190	-		PFLU_RS09320	0.20	-0.1
2,062,190	-		PFLU_RS09320	0.20	-0.2
2,062,214	+		PFLU_RS09320	0.21	+0.5
2,062,214	+		PFLU_RS09320	0.21	+1.6
2,062,214	+		PFLU_RS09320	0.21	-0.4
2,062,214	+		PFLU_RS09320	0.21	+0.6
2,062,214	+		PFLU_RS09320	0.21	+0.7
2,062,214	+		PFLU_RS09320	0.21	+0.4
2,062,215	-		PFLU_RS09320	0.22	-0.6
2,062,215	-		PFLU_RS09320	0.22	+0.2
2,062,215	-		PFLU_RS09320	0.22	-0.6
2,062,215	-		PFLU_RS09320	0.22	-1.4
2,062,236	-		PFLU_RS09320	0.23	-0.2
2,062,253	-		PFLU_RS09320	0.24	-0.7
2,062,346	-		PFLU_RS09320	0.30	+0.5
2,062,386	+		PFLU_RS09320	0.33	+0.3
2,062,387	-		PFLU_RS09320	0.33	-2.3
2,062,387	-		PFLU_RS09320	0.33	+0.6
2,062,387	-		PFLU_RS09320	0.33	-0.3
2,062,387	-		PFLU_RS09320	0.33	+0.2
2,062,387	-		PFLU_RS09320	0.33	-0.4
2,062,387	-		PFLU_RS09320	0.33	+1.0
2,062,508	-		PFLU_RS09320	0.40	+0.3
2,062,554	+		PFLU_RS09320	0.43	+1.7
2,062,555	-		PFLU_RS09320	0.43	-0.7
2,062,555	-		PFLU_RS09320	0.43	-1.4
2,062,555	-		PFLU_RS09320	0.43	+1.6
2,062,555	-		PFLU_RS09320	0.43	+0.2
2,062,565	+		PFLU_RS09320	0.44	-2.2
2,062,566	-		PFLU_RS09320	0.44	+0.8
2,062,586	+		PFLU_RS09320	0.45	+1.3
2,062,602	-		PFLU_RS09320	0.46	+0.7
2,062,619	-		PFLU_RS09320	0.48	-0.1
2,062,662	+		PFLU_RS09320	0.50	-0.5
2,062,663	-		PFLU_RS09320	0.50	+1.6
2,062,710	+		PFLU_RS09320	0.53	-0.1
2,062,711	-		PFLU_RS09320	0.54	-0.3
2,062,736	+		PFLU_RS09320	0.55	-0.7
2,062,736	+		PFLU_RS09320	0.55	-0.9
2,062,737	-		PFLU_RS09320	0.55	+0.3
2,062,737	-		PFLU_RS09320	0.55	+1.6
2,062,752	+		PFLU_RS09320	0.56	-0.1
2,062,752	+		PFLU_RS09320	0.56	-0.4
2,062,753	-		PFLU_RS09320	0.56	-0.2
2,062,775	+		PFLU_RS09320	0.58	+0.7
2,062,780	+		PFLU_RS09320	0.58	+0.0
2,062,781	-		PFLU_RS09320	0.58	-0.6
2,062,815	-		PFLU_RS09320	0.60	+0.2
2,062,815	-		PFLU_RS09320	0.60	-0.4
2,062,843	+		PFLU_RS09320	0.62	-0.1
2,062,843	+		PFLU_RS09320	0.62	-0.1
2,062,843	+		PFLU_RS09320	0.62	-1.1
2,062,843	+		PFLU_RS09320	0.62	-0.9
2,062,843	+		PFLU_RS09320	0.62	-0.6
2,062,843	+		PFLU_RS09320	0.62	+0.8
2,062,843	+		PFLU_RS09320	0.62	-1.0
2,062,843	+		PFLU_RS09320	0.62	+0.6
2,062,843	+		PFLU_RS09320	0.62	-0.2
2,062,843	+		PFLU_RS09320	0.62	+1.4
2,062,843	+		PFLU_RS09320	0.62	+0.9
2,062,843	+		PFLU_RS09320	0.62	+1.3
2,062,843	+		PFLU_RS09320	0.62	+0.5
2,062,843	+		PFLU_RS09320	0.62	-1.1
2,062,843	+		PFLU_RS09320	0.62	-0.7
2,062,843	+		PFLU_RS09320	0.62	+0.8
2,062,843	+		PFLU_RS09320	0.62	+1.8
2,062,843	+		PFLU_RS09320	0.62	-0.9
2,062,843	+		PFLU_RS09320	0.62	-1.6
2,062,843	+		PFLU_RS09320	0.62	+1.1
2,062,844	-		PFLU_RS09320	0.62	+0.4
2,062,844	-		PFLU_RS09320	0.62	-0.7
2,062,844	-		PFLU_RS09320	0.62	+0.3
2,062,844	-		PFLU_RS09320	0.62	-1.4
2,062,844	-		PFLU_RS09320	0.62	-0.9
2,062,844	-		PFLU_RS09320	0.62	+1.9
2,062,844	-		PFLU_RS09320	0.62	-2.5
2,062,844	-		PFLU_RS09320	0.62	-1.8
2,062,844	-		PFLU_RS09320	0.62	+0.6
2,062,844	-		PFLU_RS09320	0.62	+0.3
2,062,844	-		PFLU_RS09320	0.62	-0.8
2,062,844	-		PFLU_RS09320	0.62	+0.1
2,062,847	+		PFLU_RS09320	0.62	-0.0
2,062,847	+		PFLU_RS09320	0.62	+0.2
2,062,847	+		PFLU_RS09320	0.62	-1.1
2,062,847	+		PFLU_RS09320	0.62	+0.0
2,062,847	+		PFLU_RS09320	0.62	-1.2
2,062,847	+		PFLU_RS09320	0.62	+0.6
2,062,847	+		PFLU_RS09320	0.62	-0.4
2,062,847	+		PFLU_RS09320	0.62	+0.2
2,062,847	+		PFLU_RS09320	0.62	-0.4
2,062,847	+		PFLU_RS09320	0.62	-1.0
2,062,847	+		PFLU_RS09320	0.62	+1.4
2,062,847	+		PFLU_RS09320	0.62	+0.3
2,062,847	+		PFLU_RS09320	0.62	+1.2
2,062,847	+		PFLU_RS09320	0.62	+0.6
2,062,847	+		PFLU_RS09320	0.62	-1.0
2,062,847	+		PFLU_RS09320	0.62	-0.9
2,062,847	+		PFLU_RS09320	0.62	+0.3
2,062,847	+		PFLU_RS09320	0.62	+1.0
2,062,848	-		PFLU_RS09320	0.62	-0.4
2,062,848	-		PFLU_RS09320	0.62	-0.6
2,062,848	-		PFLU_RS09320	0.62	-0.1
2,062,848	-		PFLU_RS09320	0.62	+0.2
2,062,848	-		PFLU_RS09320	0.62	-1.8
2,062,848	-		PFLU_RS09320	0.62	+0.6
2,062,848	-		PFLU_RS09320	0.62	-0.5
2,062,848	-		PFLU_RS09320	0.62	-0.6
2,062,853	+		PFLU_RS09320	0.63	+1.3
2,062,854	-		PFLU_RS09320	0.63	-0.7
2,062,868	+		PFLU_RS09320	0.64	+0.0
2,062,869	-		PFLU_RS09320	0.64	+0.7
2,062,869	-		PFLU_RS09320	0.64	-0.2
2,062,869	-		PFLU_RS09320	0.64	+0.6
2,062,869	-		PFLU_RS09320	0.64	-1.5
2,062,876	+		PFLU_RS09320	0.64	-1.0
2,062,892	+		PFLU_RS09320	0.65	-0.4
2,062,899	+		PFLU_RS09320	0.66	-1.4
2,062,899	+		PFLU_RS09320	0.66	-0.7
2,062,900	-		PFLU_RS09320	0.66	-0.2
2,062,900	-		PFLU_RS09320	0.66	-0.8
2,062,919	+		PFLU_RS09320	0.67	+0.0
2,063,041	+		PFLU_RS09320	0.75	-0.1
2,063,042	-		PFLU_RS09320	0.75	-0.5
2,063,078	+		PFLU_RS09320	0.77	-0.7
2,063,079	-		PFLU_RS09320	0.77	+0.4
2,063,126	-		PFLU_RS09320	0.80	+0.5
2,063,278	+				+0.6
2,063,278	+				-0.3
2,063,278	+				+1.6
2,063,278	+				+0.7
2,063,278	+				+0.0
2,063,278	+				+1.1
2,063,278	+				+0.2
2,063,279	-				+0.9
2,063,279	-				+0.7
2,063,292	+				-0.5
2,063,292	+				-0.1
2,063,292	+				-1.0
2,063,292	+				+0.6
2,063,293	-				-0.4
2,063,293	-				-0.6
2,063,385	+				+0.6
2,063,385	+				+0.6
2,063,385	+				-0.3
2,063,385	+				-0.3
2,063,385	+				+0.6
2,063,385	+				+0.1
2,063,385	+				-1.3
2,063,385	+				+1.6
2,063,385	+				-1.1
2,063,385	+				+0.1
2,063,385	+				-0.2
2,063,385	+				-0.8
2,063,385	+				+0.1
2,063,385	+				+1.3
2,063,385	+				-0.7
2,063,385	+				+0.7
2,063,385	+				-0.5
2,063,385	+				-2.3
2,063,385	+				+0.5
2,063,385	+				+0.6
2,063,385	+				+0.1
2,063,385	+				-0.6
2,063,385	+				-0.0
2,063,385	+				+1.4
2,063,385	+				-0.6
2,063,385	+				-0.7
2,063,385	+				+1.5
2,063,385	+				+0.6
2,063,386	-				+0.9
2,063,386	-				+1.0
2,063,386	-				+0.4
2,063,386	-				+2.3
2,063,386	-				+0.2
2,063,386	-				-0.9
2,063,386	-				-0.1
2,063,386	-				+1.0
2,063,386	-				-2.2
2,063,386	-				-0.2
2,063,386	-				+0.9
2,063,386	-				-0.4
2,063,386	-				-0.2
2,063,386	-				-0.2
2,063,386	-				-0.4
2,063,386	-				-1.4
2,063,386	-				-0.1
2,063,386	-				+1.4
2,063,386	-				-0.3
2,063,386	-				-1.2
2,063,399	+				-0.3
2,063,400	-				+1.2
2,063,400	-				-0.2
2,063,400	-				-1.2
2,063,400	-				+0.3
2,063,400	-				-0.2
2,063,400	-				-0.5
2,063,402	+				+0.5
2,063,403	-				-0.8
2,063,403	-				-1.1
2,063,403	-				+2.1
2,063,403	-				-1.1
2,063,427	+				-0.7
2,063,427	+				+0.3
2,063,460	+				+0.6
2,063,460	+				-1.1
2,063,460	+				+0.7
2,063,460	+				+0.0
2,063,460	+				-1.1
2,063,460	+				+1.0
2,063,461	-				+0.9
2,063,461	-				+0.3
2,063,461	-				+0.4
2,063,461	-				-1.5
2,063,495	-				+0.0
2,063,645	+		PFLU_RS09325	0.29	+0.5
2,063,645	+		PFLU_RS09325	0.29	+0.4
2,063,645	+		PFLU_RS09325	0.29	-1.0
2,063,645	+		PFLU_RS09325	0.29	+0.4
2,063,645	+		PFLU_RS09325	0.29	+0.5
2,063,645	+		PFLU_RS09325	0.29	-0.7
2,063,646	-		PFLU_RS09325	0.29	+0.5
2,063,646	-		PFLU_RS09325	0.29	-0.2
2,063,678	+		PFLU_RS09325	0.33	+0.2
2,063,678	+		PFLU_RS09325	0.33	+0.9
2,063,678	+		PFLU_RS09325	0.33	+0.9
2,063,679	-		PFLU_RS09325	0.33	+0.6
2,063,679	-		PFLU_RS09325	0.33	-0.4
2,063,679	-		PFLU_RS09325	0.33	-1.2
2,063,679	-		PFLU_RS09325	0.33	+0.2
2,063,679	-		PFLU_RS09325	0.33	+0.9
2,063,688	+		PFLU_RS09325	0.35	-0.4
2,063,689	-		PFLU_RS09325	0.35	+0.8
2,063,828	-		PFLU_RS09325	0.53	-0.4
2,063,828	-		PFLU_RS09325	0.53	+0.3
2,063,870	-		PFLU_RS09325	0.59	-0.6
2,063,870	-		PFLU_RS09325	0.59	-1.8
2,063,889	+		PFLU_RS09325	0.61	+1.5
2,063,894	+		PFLU_RS09325	0.62	-0.2
2,063,894	+		PFLU_RS09325	0.62	-0.7
2,063,895	-		PFLU_RS09325	0.62	-1.5
2,063,895	-		PFLU_RS09325	0.62	+0.6
2,063,921	+		PFLU_RS09325	0.66	+2.4
2,063,921	+		PFLU_RS09325	0.66	+1.1
2,063,921	+		PFLU_RS09325	0.66	+1.2
2,063,922	-		PFLU_RS09325	0.66	-1.6
2,063,922	-		PFLU_RS09325	0.66	-0.4
2,063,924	+		PFLU_RS09325	0.66	+0.2
2,063,924	+		PFLU_RS09325	0.66	-2.3
2,063,924	+		PFLU_RS09325	0.66	-1.6
2,063,925	-		PFLU_RS09325	0.66	-0.1
2,063,925	-		PFLU_RS09325	0.66	+1.5
2,063,930	+		PFLU_RS09325	0.67	+1.6
2,063,930	+		PFLU_RS09325	0.67	+0.4
2,063,930	+		PFLU_RS09325	0.67	+0.4
2,063,930	+		PFLU_RS09325	0.67	+0.1
2,063,930	+		PFLU_RS09325	0.67	+0.3
2,063,930	+		PFLU_RS09325	0.67	+1.7
2,063,931	-		PFLU_RS09325	0.67	-2.0
2,063,931	-		PFLU_RS09325	0.67	+0.0
2,063,931	-		PFLU_RS09325	0.67	+0.4
2,063,931	-		PFLU_RS09325	0.67	-0.1
2,063,931	-		PFLU_RS09325	0.67	+0.9
2,063,931	-		PFLU_RS09325	0.67	-0.1
2,063,931	-		PFLU_RS09325	0.67	+0.2
2,063,931	-		PFLU_RS09325	0.67	+0.3
2,063,931	-		PFLU_RS09325	0.67	+0.0
2,063,931	-		PFLU_RS09325	0.67	-0.7
2,064,024	+		PFLU_RS09325	0.79	-0.0
2,064,024	+		PFLU_RS09325	0.79	+0.0
2,064,024	+		PFLU_RS09325	0.79	-0.2
2,064,025	-		PFLU_RS09325	0.80	+0.2
2,064,025	-		PFLU_RS09325	0.80	-0.6
2,064,025	-		PFLU_RS09325	0.80	+0.0
2,064,025	-		PFLU_RS09325	0.80	+0.9
2,064,025	-		PFLU_RS09325	0.80	+0.7
2,064,025	-		PFLU_RS09325	0.80	-0.3
2,064,025	-		PFLU_RS09325	0.80	+0.6
2,064,052	+		PFLU_RS09325	0.83	-1.4
2,064,052	+		PFLU_RS09325	0.83	-2.4
2,064,053	-		PFLU_RS09325	0.83	+0.7
2,064,099	+		PFLU_RS09325	0.89	+0.9
2,064,122	+				-0.4
2,064,122	+				+0.0
2,064,122	+				+0.3
2,064,122	+				-1.1
2,064,123	-				+0.3
2,064,123	-				-0.5
2,064,123	-				-3.4
2,064,176	-				-0.9
2,064,279	-				-1.3
2,064,324	+				-1.2
2,064,324	+				-0.5
2,064,355	+				-0.4
2,064,358	+				+0.1
2,064,359	-				-2.2
2,064,383	+				+0.8
2,064,387	+				-1.4
2,064,394	-		PFLU_RS30555	0.17	+1.6