Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08650

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,924,303	+				-0.6
1,924,304	-				-2.8
1,924,304	-				+0.3
1,924,304	-				-0.0
1,924,361	+				-0.3
1,924,361	+				+2.0
1,924,361	+				+1.4
1,924,362	-				-0.8
1,924,362	-				-0.7
1,924,380	+				-0.1
1,924,380	+				+1.5
1,924,380	+				+0.6
1,924,380	+				-0.9
1,924,380	+				+1.5
1,924,380	+				-1.0
1,924,380	+				-0.4
1,924,380	+				-0.7
1,924,380	+				-0.3
1,924,380	+				-1.1
1,924,380	+				-0.2
1,924,380	+				+0.1
1,924,380	+				+0.5
1,924,380	+				+1.0
1,924,380	+				+1.2
1,924,380	+				+1.0
1,924,380	+				-0.0
1,924,380	+				-0.7
1,924,380	+				+0.3
1,924,380	+				-1.3
1,924,380	+				-0.3
1,924,380	+				-0.4
1,924,380	+				-0.9
1,924,380	+				-1.0
1,924,380	+				-2.3
1,924,380	+				+0.4
1,924,380	+				+1.0
1,924,380	+				-0.8
1,924,380	+				+0.2
1,924,380	+				+0.2
1,924,380	+				+1.2
1,924,380	+				+0.4
1,924,380	+				-0.5
1,924,380	+				+3.1
1,924,380	+				+0.1
1,924,380	+				+1.1
1,924,380	+				-0.3
1,924,380	+				+0.8
1,924,380	+				-0.8
1,924,380	+				-1.8
1,924,380	+				+0.8
1,924,380	+				+1.1
1,924,380	+				-0.9
1,924,380	+				+0.6
1,924,380	+				+0.8
1,924,380	+				-0.3
1,924,380	+				+1.6
1,924,381	-				-1.3
1,924,381	-				+1.7
1,924,381	-				-0.0
1,924,381	-				-1.2
1,924,381	-				+0.0
1,924,381	-				+0.1
1,924,381	-				+0.4
1,924,381	-				-1.4
1,924,381	-				-0.4
1,924,381	-				-0.7
1,924,381	-				+0.8
1,924,381	-				+0.1
1,924,381	-				-0.6
1,924,381	-				-1.1
1,924,381	-				-0.2
1,924,381	-				-0.5
1,924,381	-				+0.6
1,924,381	-				-1.0
1,924,381	-				+0.0
1,924,381	-				-0.2
1,924,381	-				-0.4
1,924,381	-				-1.0
1,924,381	-				-0.2
1,924,381	-				+0.8
1,924,381	-				+0.0
1,924,381	-				+1.0
1,924,381	-				+0.4
1,924,381	-				+1.0
1,924,381	-				-0.8
1,924,381	-				+1.4
1,924,381	-				-0.3
1,924,381	-				-0.4
1,924,381	-				-1.0
1,924,381	-				+1.3
1,924,381	-				+0.3
1,924,381	-				-1.4
1,924,381	-				-0.6
1,924,381	-				-0.4
1,924,381	-				-1.4
1,924,381	-				+1.1
1,924,381	-				+0.1
1,924,381	-				-0.7
1,924,381	-				-1.3
1,924,381	-				-2.7
1,924,381	-				-0.1
1,924,381	-				-1.8
1,924,381	-				+0.5
1,924,381	-				+1.0
1,924,381	-				-0.2
1,924,382	+				-0.6
1,924,382	+				-0.6
1,924,382	+				+0.5
1,924,383	-				+0.3
1,924,383	-				-1.2
1,924,383	-				+2.3
1,924,383	-				-0.2
1,924,425	+				+0.0
1,924,425	+				-0.6
1,924,425	+				-0.9
1,924,425	+				-0.7
1,924,425	+				+1.2
1,924,426	-				-0.2
1,924,426	-				+0.6
1,924,426	-				-0.4
1,924,426	-				+2.6
1,924,426	-				-2.0
1,924,464	+				+1.2
1,924,464	+				+0.2
1,924,511	+				-0.3
1,924,512	-				+1.6
1,924,969	+		PFLU_RS08645	0.69	-0.7
1,924,970	-		PFLU_RS08645	0.69	+1.6
1,925,341	+		PFLU_RS08650	0.27	+0.6
1,925,342	-		PFLU_RS08650	0.27	+0.0
1,925,342	-		PFLU_RS08650	0.27	+1.6
1,925,518	+		PFLU_RS08650	0.54	+1.6
1,925,519	-		PFLU_RS08650	0.54	+1.6
1,925,519	-		PFLU_RS08650	0.54	+0.6
1,925,519	-		PFLU_RS08650	0.54	+1.6
1,925,667	+		PFLU_RS08650	0.76	+0.6
1,925,667	+		PFLU_RS08650	0.76	+0.0
1,925,667	+		PFLU_RS08650	0.76	+1.6
1,925,667	+		PFLU_RS08650	0.76	+1.6
1,925,667	+		PFLU_RS08650	0.76	-0.4
1,925,668	-		PFLU_RS08650	0.76	+0.0
1,925,668	-		PFLU_RS08650	0.76	+1.6
1,925,668	-		PFLU_RS08650	0.76	+2.6
1,925,668	-		PFLU_RS08650	0.76	+1.6
1,925,668	-		PFLU_RS08650	0.76	+1.6
1,925,668	-		PFLU_RS08650	0.76	-0.4
1,925,668	-		PFLU_RS08650	0.76	+0.6
1,925,792	+				+1.6
1,925,793	-				+0.0
1,925,827	-				+1.1
1,925,848	+				+0.5
1,925,848	+				-0.8
1,925,849	-				+1.3
1,925,849	-				-0.7
1,925,849	-				+2.0
1,925,849	-				+0.8
1,925,856	-				+0.0
1,925,856	-				-0.8
1,925,856	-				-1.8
1,925,862	+				-0.1
1,925,871	+				+2.6
1,925,871	+				-0.2
1,925,872	-				+1.7
1,925,960	+				+4.2
1,925,961	-				+2.6
1,925,961	-				+1.6
1,926,089	+		PFLU_RS08655	0.23	+0.0
1,926,089	+		PFLU_RS08655	0.23	+0.6
1,926,089	+		PFLU_RS08655	0.23	+1.6
1,926,089	+		PFLU_RS08655	0.23	-0.7
1,926,089	+		PFLU_RS08655	0.23	-0.4
1,926,089	+		PFLU_RS08655	0.23	+0.6
1,926,089	+		PFLU_RS08655	0.23	+1.6
1,926,089	+		PFLU_RS08655	0.23	+1.6
1,926,089	+		PFLU_RS08655	0.23	+0.0
1,926,090	-		PFLU_RS08655	0.23	+0.6
1,926,090	-		PFLU_RS08655	0.23	+1.6
1,926,090	-		PFLU_RS08655	0.23	-0.4
1,926,090	-		PFLU_RS08655	0.23	-0.4
1,926,090	-		PFLU_RS08655	0.23	+1.6
1,926,090	-		PFLU_RS08655	0.23	+0.3
1,926,091	+		PFLU_RS08655	0.23	-1.6
1,926,092	-		PFLU_RS08655	0.23	+0.0
1,926,129	-		PFLU_RS08655	0.28	+1.6
1,926,332	+		PFLU_RS08655	0.55	+1.6
1,926,333	-		PFLU_RS08655	0.55	+1.6
1,926,333	-		PFLU_RS08655	0.55	+1.6
1,926,440	+		PFLU_RS08655	0.69	+1.6
1,926,554	+		PFLU_RS08655	0.85	+0.6
1,926,555	-		PFLU_RS08655	0.85	+0.6
1,926,718	+		PFLU_RS08660	0.29	+0.0
1,926,718	+		PFLU_RS08660	0.29	+1.6
1,926,718	+		PFLU_RS08660	0.29	+1.2
1,926,719	-		PFLU_RS08660	0.29	+1.0
1,926,719	-		PFLU_RS08660	0.29	+2.6
1,926,719	-		PFLU_RS08660	0.29	-0.4
1,926,719	-		PFLU_RS08660	0.29	+1.6
1,926,719	-		PFLU_RS08660	0.29	-0.4
1,926,719	-		PFLU_RS08660	0.29	-0.7
1,926,719	-		PFLU_RS08660	0.29	-0.7
1,926,719	-		PFLU_RS08660	0.29	+1.6
1,926,719	-		PFLU_RS08660	0.29	+2.6
1,926,719	-		PFLU_RS08660	0.29	+1.6
1,926,719	-		PFLU_RS08660	0.29	+1.6
1,926,733	+		PFLU_RS08660	0.37	+0.6