Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07350

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,634,883	+		PFLU_RS07345	0.54	+1.6
1,634,950	+		PFLU_RS07345	0.59	-0.3
1,634,950	+		PFLU_RS07345	0.59	-1.5
1,634,950	+		PFLU_RS07345	0.59	+0.3
1,634,950	+		PFLU_RS07345	0.59	+0.3
1,634,950	+		PFLU_RS07345	0.59	+0.0
1,634,950	+		PFLU_RS07345	0.59	-0.5
1,634,950	+		PFLU_RS07345	0.59	-1.1
1,634,950	+		PFLU_RS07345	0.59	-0.3
1,634,950	+		PFLU_RS07345	0.59	-0.0
1,634,950	+		PFLU_RS07345	0.59	+2.2
1,634,950	+		PFLU_RS07345	0.59	-2.2
1,634,950	+		PFLU_RS07345	0.59	-0.4
1,634,951	-		PFLU_RS07345	0.59	+0.4
1,634,951	-		PFLU_RS07345	0.59	-1.1
1,634,951	-		PFLU_RS07345	0.59	-0.5
1,634,951	-		PFLU_RS07345	0.59	+0.6
1,634,951	-		PFLU_RS07345	0.59	+0.5
1,634,963	+		PFLU_RS07345	0.60	+1.9
1,634,988	+		PFLU_RS07345	0.62	+1.4
1,634,988	+		PFLU_RS07345	0.62	-1.4
1,634,989	-		PFLU_RS07345	0.62	+0.3
1,634,989	-		PFLU_RS07345	0.62	-0.1
1,635,023	+		PFLU_RS07345	0.65	+0.4
1,635,023	+		PFLU_RS07345	0.65	+0.0
1,635,024	-		PFLU_RS07345	0.65	-0.5
1,635,024	-		PFLU_RS07345	0.65	-0.4
1,635,024	-		PFLU_RS07345	0.65	+0.7
1,635,024	-		PFLU_RS07345	0.65	-0.3
1,635,024	-		PFLU_RS07345	0.65	-0.2
1,635,062	+		PFLU_RS07345	0.68	+0.5
1,635,062	+		PFLU_RS07345	0.68	+1.5
1,635,062	+		PFLU_RS07345	0.68	-1.0
1,635,063	-		PFLU_RS07345	0.68	-0.7
1,635,063	-		PFLU_RS07345	0.68	-0.2
1,635,063	-		PFLU_RS07345	0.68	-0.7
1,635,248	+		PFLU_RS07345	0.82	-1.4
1,635,248	+		PFLU_RS07345	0.82	-0.7
1,635,248	+		PFLU_RS07345	0.82	+1.3
1,635,248	+		PFLU_RS07345	0.82	-0.5
1,635,248	+		PFLU_RS07345	0.82	+0.0
1,635,248	+		PFLU_RS07345	0.82	+0.9
1,635,249	-		PFLU_RS07345	0.82	+0.9
1,635,249	-		PFLU_RS07345	0.82	+0.7
1,635,249	-		PFLU_RS07345	0.82	+1.4
1,635,249	-		PFLU_RS07345	0.82	-0.2
1,635,249	-		PFLU_RS07345	0.82	+0.9
1,635,249	-		PFLU_RS07345	0.82	+0.8
1,635,249	-		PFLU_RS07345	0.82	+1.7
1,635,249	-		PFLU_RS07345	0.82	+0.5
1,635,249	-		PFLU_RS07345	0.82	+1.2
1,635,261	+		PFLU_RS07345	0.83	+0.2
1,635,261	+		PFLU_RS07345	0.83	+0.3
1,635,262	-		PFLU_RS07345	0.83	-0.5
1,635,262	-		PFLU_RS07345	0.83	-0.8
1,635,262	-		PFLU_RS07345	0.83	+0.8
1,635,319	+		PFLU_RS07345	0.87	-0.7
1,635,320	-		PFLU_RS07345	0.87	+0.4
1,635,363	+				-0.7
1,635,365	+				-0.5
1,635,365	+				+0.6
1,635,365	+				+0.1
1,635,365	+				+1.0
1,635,366	-				+1.0
1,635,366	-				-0.4
1,635,366	-				+0.1
1,635,366	-				-0.7
1,635,366	-				+0.3
1,635,366	-				-0.6
1,635,366	-				-1.3
1,635,366	-				-0.8
1,635,366	-				+0.1
1,635,366	-				+0.6
1,635,375	-				-1.4
1,635,424	-				+0.5
1,635,477	+				+0.3
1,635,528	-				+0.5
1,635,704	+				-0.4
1,635,704	+				-0.7
1,635,704	+				-0.6
1,635,704	+				+0.3
1,635,704	+				-0.2
1,635,705	-				-1.3
1,635,705	-				+0.7
1,635,801	-				-2.2
1,635,972	+		PFLU_RS07350	0.33	-0.4
1,635,972	+		PFLU_RS07350	0.33	-0.6
1,635,973	-		PFLU_RS07350	0.33	-1.8
1,635,979	+		PFLU_RS07350	0.34	+0.3
1,635,979	+		PFLU_RS07350	0.34	-0.3
1,635,980	-		PFLU_RS07350	0.34	-1.5
1,636,174	+		PFLU_RS07350	0.61	+0.3
1,636,174	+		PFLU_RS07350	0.61	-0.6
1,636,175	-		PFLU_RS07350	0.61	+1.4
1,636,175	-		PFLU_RS07350	0.61	-0.7
1,636,175	-		PFLU_RS07350	0.61	-0.4
1,636,175	-		PFLU_RS07350	0.61	+1.9
1,636,175	-		PFLU_RS07350	0.61	+0.2
1,636,178	+		PFLU_RS07350	0.62	-0.8
1,636,178	+		PFLU_RS07350	0.62	-1.7
1,636,178	+		PFLU_RS07350	0.62	-0.8
1,636,178	+		PFLU_RS07350	0.62	+0.3
1,636,178	+		PFLU_RS07350	0.62	+0.6
1,636,178	+		PFLU_RS07350	0.62	+0.8
1,636,178	+		PFLU_RS07350	0.62	+0.3
1,636,178	+		PFLU_RS07350	0.62	-1.1
1,636,178	+		PFLU_RS07350	0.62	-0.1
1,636,179	-		PFLU_RS07350	0.62	-0.1
1,636,179	-		PFLU_RS07350	0.62	+0.1
1,636,179	-		PFLU_RS07350	0.62	+0.3
1,636,267	+		PFLU_RS07350	0.74	+0.7
1,636,441	+				+0.4
1,636,442	-				+0.9
1,636,460	+				+0.8
1,636,460	+				+1.7
1,636,461	-				+0.8
1,636,488	-				+1.4
1,636,493	+				+0.3
1,636,493	+				-0.8
1,636,493	+				+0.9
1,636,493	+				+1.0
1,636,494	-				-0.4
1,636,543	+		PFLU_RS07355	0.12	-0.1
1,636,543	+		PFLU_RS07355	0.12	-0.0
1,636,543	+		PFLU_RS07355	0.12	-0.9
1,636,543	+		PFLU_RS07355	0.12	+0.1
1,636,544	-		PFLU_RS07355	0.12	-1.1
1,636,615	+		PFLU_RS07355	0.21	-0.0
1,636,682	+		PFLU_RS07355	0.29	+1.4
1,636,683	-		PFLU_RS07355	0.30	+0.0
1,636,743	+		PFLU_RS07355	0.37	+0.2
1,636,921	+		PFLU_RS07355	0.60	+2.1
1,636,922	-		PFLU_RS07355	0.60	+0.5
1,637,101	+		PFLU_RS07355	0.83	-0.5
1,637,101	+		PFLU_RS07355	0.83	+0.7
1,637,102	-		PFLU_RS07355	0.83	+0.9
1,637,102	-		PFLU_RS07355	0.83	+0.4
1,637,230	+				-0.7
1,637,236	+				+0.4
1,637,236	+				+2.5
1,637,236	+				+0.3
1,637,237	-				+0.4
1,637,237	-				-1.0
1,637,237	-				+0.4
1,637,237	-				+0.8
1,637,253	+				-1.0
1,637,253	+				+0.3
1,637,253	+				-0.2
1,637,253	+				-1.7
1,637,254	-				+2.2
1,637,254	-				+0.6
1,637,282	-				-1.8
1,637,282	-				-1.1
1,637,287	+				+0.4
1,637,287	+				+0.7
1,637,287	+				+0.0
1,637,288	-				+1.0
1,637,288	-				+0.6
1,637,288	-				-0.7
1,637,332	+				-0.5
1,637,332	+				-0.2
1,637,332	+				-1.1
1,637,333	-				+2.1
1,637,333	-				-0.7
1,637,333	-				+0.9
1,637,333	-				-1.0
1,637,333	-				-1.2
1,637,333	-				-1.5
1,637,333	-				-0.3
1,637,333	-				-1.9
1,637,359	+				+0.1
1,637,359	+				-2.4
1,637,359	+				+0.7