Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21150 and OH686_21155 are separated by 52 nucleotides OH686_21155 and OH686_21160 are separated by 60 nucleotides OH686_21160 and OH686_21165 are separated by 10 nucleotides OH686_21165 and OH686_21170 are separated by 21 nucleotides
OH686_21150: OH686_21150 - 6-phosphogluconolactonase , eukaryotic type, at 4,334,086 to 4,334,799
_21150
OH686_21155: OH686_21155 - CDS, at 4,334,852 to 4,334,965
_21155
OH686_21160: OH686_21160 - PhnB protein, at 4,335,026 to 4,335,448
_21160
OH686_21165: OH686_21165 - PhnB protein / putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein, at 4,335,459 to 4,335,881
_21165
OH686_21170: OH686_21170 - Transcriptional regulator, AraC family, at 4,335,903 to 4,336,646
_21170
Position (kb)
4335
4336 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4334.487 kb on + strand, within OH686_21150 at 4334.869 kb on + strand, within OH686_21155 at 4334.883 kb on + strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4334.884 kb on - strand, within OH686_21155 at 4335.042 kb on + strand at 4335.042 kb on + strand at 4335.042 kb on + strand at 4335.042 kb on + strand at 4335.113 kb on + strand, within OH686_21160 at 4335.113 kb on + strand, within OH686_21160 at 4335.113 kb on + strand, within OH686_21160 at 4335.113 kb on + strand, within OH686_21160 at 4335.113 kb on + strand, within OH686_21160 at 4335.113 kb on + strand, within OH686_21160 at 4335.114 kb on - strand, within OH686_21160 at 4335.114 kb on - strand, within OH686_21160 at 4335.114 kb on - strand, within OH686_21160 at 4335.114 kb on - strand, within OH686_21160 at 4335.446 kb on + strand at 4335.474 kb on + strand at 4335.475 kb on - strand at 4335.475 kb on - strand at 4335.475 kb on - strand at 4335.516 kb on + strand, within OH686_21165 at 4335.516 kb on + strand, within OH686_21165 at 4335.516 kb on + strand, within OH686_21165 at 4335.516 kb on + strand, within OH686_21165 at 4335.517 kb on - strand, within OH686_21165 at 4335.517 kb on - strand, within OH686_21165 at 4335.676 kb on - strand, within OH686_21165 at 4335.676 kb on - strand, within OH686_21165 at 4335.676 kb on - strand, within OH686_21165 at 4335.932 kb on - strand at 4335.994 kb on + strand, within OH686_21170 at 4336.081 kb on + strand, within OH686_21170 at 4336.081 kb on + strand, within OH686_21170 at 4336.081 kb on + strand, within OH686_21170 at 4336.082 kb on - strand, within OH686_21170 at 4336.186 kb on + strand, within OH686_21170 at 4336.199 kb on + strand, within OH686_21170 at 4336.369 kb on + strand, within OH686_21170 at 4336.369 kb on + strand, within OH686_21170 at 4336.369 kb on + strand, within OH686_21170 at 4336.570 kb on + strand, within OH686_21170 at 4336.571 kb on - strand, within OH686_21170 at 4336.571 kb on - strand, within OH686_21170 at 4336.571 kb on - strand, within OH686_21170 at 4336.571 kb on - strand, within OH686_21170 at 4336.626 kb on - strand at 4336.654 kb on + strand at 4336.654 kb on + strand at 4336.654 kb on + strand at 4336.654 kb on + strand at 4336.654 kb on + strand at 4336.654 kb on + strand at 4336.655 kb on - strand at 4336.655 kb on - strand at 4336.655 kb on - strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.786 kb on + strand at 4336.787 kb on - strand at 4336.787 kb on - strand at 4336.787 kb on - strand at 4336.787 kb on - strand at 4336.787 kb on - strand at 4336.787 kb on - strand at 4336.787 kb on - strand at 4336.860 kb on + strand at 4336.860 kb on + strand at 4336.860 kb on + strand at 4336.860 kb on + strand at 4336.861 kb on - strand at 4336.861 kb on - strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.862 kb on + strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.863 kb on - strand at 4336.866 kb on + strand at 4336.866 kb on + strand at 4336.867 kb on - strand at 4336.867 kb on - strand at 4336.867 kb on - strand at 4336.867 kb on - strand at 4336.867 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,334,487 + OH686_21150 0.56 -3.6 4,334,869 + OH686_21155 0.15 +0.5 4,334,883 + OH686_21155 0.27 +1.4 4,334,884 - OH686_21155 0.28 -0.0 4,334,884 - OH686_21155 0.28 +0.4 4,334,884 - OH686_21155 0.28 +0.6 4,334,884 - OH686_21155 0.28 +1.0 4,334,884 - OH686_21155 0.28 +0.1 4,334,884 - OH686_21155 0.28 -0.2 4,334,884 - OH686_21155 0.28 -0.6 4,335,042 + -0.4 4,335,042 + -0.6 4,335,042 + +0.9 4,335,042 + -0.8 4,335,113 + OH686_21160 0.21 -0.4 4,335,113 + OH686_21160 0.21 -1.6 4,335,113 + OH686_21160 0.21 +0.8 4,335,113 + OH686_21160 0.21 -0.1 4,335,113 + OH686_21160 0.21 -0.3 4,335,113 + OH686_21160 0.21 +0.2 4,335,114 - OH686_21160 0.21 -0.2 4,335,114 - OH686_21160 0.21 -0.0 4,335,114 - OH686_21160 0.21 +0.7 4,335,114 - OH686_21160 0.21 -0.7 4,335,446 + -0.4 4,335,474 + -0.4 4,335,475 - +0.2 4,335,475 - +0.3 4,335,475 - +0.8 4,335,516 + OH686_21165 0.13 +0.2 4,335,516 + OH686_21165 0.13 -0.3 4,335,516 + OH686_21165 0.13 +0.4 4,335,516 + OH686_21165 0.13 +0.4 4,335,517 - OH686_21165 0.14 +0.0 4,335,517 - OH686_21165 0.14 +2.6 4,335,676 - OH686_21165 0.51 +0.4 4,335,676 - OH686_21165 0.51 -0.7 4,335,676 - OH686_21165 0.51 +0.3 4,335,932 - -0.7 4,335,994 + OH686_21170 0.12 +0.0 4,336,081 + OH686_21170 0.24 -0.8 4,336,081 + OH686_21170 0.24 -0.2 4,336,081 + OH686_21170 0.24 +0.7 4,336,082 - OH686_21170 0.24 -0.4 4,336,186 + OH686_21170 0.38 +0.2 4,336,199 + OH686_21170 0.40 -1.4 4,336,369 + OH686_21170 0.63 -0.3 4,336,369 + OH686_21170 0.63 +0.7 4,336,369 + OH686_21170 0.63 -0.2 4,336,570 + OH686_21170 0.90 -0.2 4,336,571 - OH686_21170 0.90 -0.7 4,336,571 - OH686_21170 0.90 -0.3 4,336,571 - OH686_21170 0.90 +0.4 4,336,571 - OH686_21170 0.90 +0.4 4,336,626 - +0.4 4,336,654 + -0.3 4,336,654 + -0.9 4,336,654 + -0.2 4,336,654 + +0.3 4,336,654 + -0.5 4,336,654 + +0.0 4,336,655 - +0.5 4,336,655 - +0.2 4,336,655 - +0.4 4,336,786 + +1.0 4,336,786 + -1.3 4,336,786 + +0.6 4,336,786 + -0.1 4,336,786 + -1.1 4,336,786 + +0.9 4,336,786 + -0.2 4,336,786 + -0.6 4,336,786 + -0.4 4,336,786 + +0.8 4,336,786 + +0.7 4,336,786 + +0.2 4,336,786 + -0.5 4,336,786 + +1.4 4,336,786 + +0.6 4,336,787 - -0.5 4,336,787 - -0.1 4,336,787 - +0.6 4,336,787 - +0.0 4,336,787 - -0.7 4,336,787 - +1.2 4,336,787 - -0.3 4,336,860 + -0.5 4,336,860 + -0.2 4,336,860 + +1.9 4,336,860 + -0.3 4,336,861 - +0.2 4,336,861 - +0.1 4,336,862 + -0.1 4,336,862 + +0.1 4,336,862 + -0.8 4,336,862 + +0.6 4,336,862 + -0.1 4,336,862 + -0.1 4,336,862 + +1.2 4,336,862 + +0.3 4,336,862 + +0.0 4,336,862 + -0.0 4,336,862 + +0.4 4,336,862 + -0.0 4,336,862 + -0.3 4,336,862 + -0.4 4,336,862 + -1.5 4,336,862 + -0.5 4,336,862 + -0.1 4,336,862 + -0.1 4,336,862 + +0.8 4,336,863 - +0.7 4,336,863 - +0.1 4,336,863 - +0.1 4,336,863 - +0.0 4,336,863 - +0.2 4,336,863 - -0.2 4,336,863 - -0.5 4,336,863 - +0.0 4,336,863 - +1.6 4,336,863 - -1.0 4,336,863 - +0.3 4,336,863 - +0.5 4,336,863 - -0.4 4,336,863 - -0.7 4,336,863 - -1.0 4,336,863 - -0.5 4,336,863 - +0.3 4,336,863 - +0.3 4,336,863 - +0.2 4,336,866 + -0.1 4,336,866 + -0.3 4,336,867 - +0.4 4,336,867 - -0.8 4,336,867 - +1.5 4,336,867 - -0.9 4,336,867 - -0.4
Or see this region's nucleotide sequence