Strain Fitness in Pseudomonas sp. S08-1 around OH686_16420

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,433,953	+				-1.2
3,433,953	+				+0.1
3,433,954	-				-0.1
3,433,954	-				-0.6
3,433,954	-				+0.6
3,433,954	-				-1.0
3,434,100	+		OH686_16415	0.29	+0.2
3,434,100	+		OH686_16415	0.29	-0.3
3,434,100	+		OH686_16415	0.29	+1.2
3,434,101	-		OH686_16415	0.29	+0.7
3,434,455	+		OH686_16415	0.78	-0.0
3,434,455	+		OH686_16415	0.78	+0.7
3,434,455	+		OH686_16415	0.78	+0.3
3,434,455	+		OH686_16415	0.78	-0.6
3,434,455	+		OH686_16415	0.78	-0.0
3,434,455	+		OH686_16415	0.78	+1.5
3,434,455	+		OH686_16415	0.78	-0.1
3,434,455	+		OH686_16415	0.78	-1.4
3,434,455	+		OH686_16415	0.78	-0.1
3,434,455	+		OH686_16415	0.78	+0.0
3,434,455	+		OH686_16415	0.78	-0.2
3,434,455	+		OH686_16415	0.78	-0.7
3,434,455	+		OH686_16415	0.78	-0.2
3,434,456	-		OH686_16415	0.78	-1.8
3,434,456	-		OH686_16415	0.78	+0.1
3,434,456	-		OH686_16415	0.78	+0.2
3,434,456	-		OH686_16415	0.78	-1.0
3,434,456	-		OH686_16415	0.78	-1.0
3,434,456	-		OH686_16415	0.78	+0.6
3,434,456	-		OH686_16415	0.78	+0.5
3,434,470	+		OH686_16415	0.80	-0.1
3,434,470	+		OH686_16415	0.80	+0.6
3,434,470	+		OH686_16415	0.80	-0.0
3,434,470	+		OH686_16415	0.80	+0.1
3,434,470	+		OH686_16415	0.80	+1.3
3,434,470	+		OH686_16415	0.80	+0.2
3,434,470	+		OH686_16415	0.80	+0.4
3,434,470	+		OH686_16415	0.80	+2.5
3,434,470	+		OH686_16415	0.80	+0.3
3,434,470	+		OH686_16415	0.80	+0.6
3,434,470	+		OH686_16415	0.80	-0.0
3,434,470	+		OH686_16415	0.80	+0.4
3,434,470	+		OH686_16415	0.80	+0.1
3,434,470	+		OH686_16415	0.80	-0.3
3,434,470	+		OH686_16415	0.80	-0.1
3,434,470	+		OH686_16415	0.80	+0.0
3,434,470	+		OH686_16415	0.80	-0.3
3,434,470	+		OH686_16415	0.80	+0.4
3,434,470	+		OH686_16415	0.80	-0.4
3,434,471	-		OH686_16415	0.80	-1.4
3,434,471	-		OH686_16415	0.80	-0.2
3,434,471	-		OH686_16415	0.80	-0.6
3,434,471	-		OH686_16415	0.80	+0.6
3,434,471	-		OH686_16415	0.80	+0.1
3,434,471	-		OH686_16415	0.80	-0.0
3,434,471	-		OH686_16415	0.80	+0.1
3,434,471	-		OH686_16415	0.80	+0.4
3,434,471	-		OH686_16415	0.80	+0.1
3,434,471	-		OH686_16415	0.80	-1.9
3,434,471	-		OH686_16415	0.80	+0.2
3,434,471	-		OH686_16415	0.80	+0.2
3,434,471	-		OH686_16415	0.80	-0.6
3,434,471	-		OH686_16415	0.80	-0.3
3,434,516	+		OH686_16415	0.86	+1.3
3,434,516	+		OH686_16415	0.86	+1.2
3,434,516	+		OH686_16415	0.86	+1.0
3,434,516	+		OH686_16415	0.86	+0.4
3,434,516	+		OH686_16415	0.86	+0.5
3,434,516	+		OH686_16415	0.86	-1.1
3,434,516	+		OH686_16415	0.86	-0.2
3,434,516	+		OH686_16415	0.86	-0.2
3,434,516	+		OH686_16415	0.86	+0.3
3,434,516	+		OH686_16415	0.86	-0.9
3,434,516	+		OH686_16415	0.86	+0.0
3,434,516	+		OH686_16415	0.86	+0.5
3,434,517	-		OH686_16415	0.86	+0.8
3,434,517	-		OH686_16415	0.86	+0.4
3,434,517	-		OH686_16415	0.86	+0.5
3,434,517	-		OH686_16415	0.86	+0.6
3,434,517	-		OH686_16415	0.86	+0.3
3,434,517	-		OH686_16415	0.86	-0.3
3,434,517	-		OH686_16415	0.86	+1.0
3,434,517	-		OH686_16415	0.86	+0.5
3,434,517	-		OH686_16415	0.86	-0.0
3,434,517	-		OH686_16415	0.86	+1.0
3,434,518	+		OH686_16415	0.86	-0.4
3,434,519	-		OH686_16415	0.86	-0.1
3,434,519	-		OH686_16415	0.86	+0.8
3,434,519	-		OH686_16415	0.86	+0.5
3,434,519	-		OH686_16415	0.86	-0.8
3,434,519	-		OH686_16415	0.86	+0.1
3,434,519	-		OH686_16415	0.86	+1.3
3,434,535	+		OH686_16415	0.88	-0.7
3,434,535	+		OH686_16415	0.88	+0.3
3,434,535	+		OH686_16415	0.88	-1.7
3,434,535	+		OH686_16415	0.88	-0.6
3,434,535	+		OH686_16415	0.88	+0.0
3,434,536	-		OH686_16415	0.89	+1.8
3,434,536	-		OH686_16415	0.89	-0.1
3,434,663	+				-1.5
3,434,667	+				-0.1
3,434,667	+				-0.0
3,434,667	+				-0.5
3,434,667	+				+0.0
3,434,667	+				+1.1
3,434,667	+				-0.7
3,434,667	+				+0.2
3,434,667	+				-0.6
3,434,667	+				+0.5
3,434,667	+				+0.1
3,434,667	+				+0.4
3,434,667	+				-0.2
3,434,667	+				+2.0
3,434,667	+				+0.1
3,434,667	+				-0.5
3,434,667	+				-0.7
3,434,668	-				-0.4
3,434,668	-				-1.3
3,434,668	-				+0.6
3,434,668	-				+0.4
3,434,668	-				+0.3
3,434,668	-				-0.9
3,434,678	-				+1.8
3,434,758	+				-0.0
3,434,758	+				-0.4
3,435,230	+		OH686_16420	0.19	-0.4
3,435,230	+		OH686_16420	0.19	+1.3
3,435,230	+		OH686_16420	0.19	-1.0
3,435,230	+		OH686_16420	0.19	-0.2
3,435,230	+		OH686_16420	0.19	-0.4
3,435,230	+		OH686_16420	0.19	+0.2
3,435,230	+		OH686_16420	0.19	-0.6
3,435,230	+		OH686_16420	0.19	-0.2
3,435,230	+		OH686_16420	0.19	-0.0
3,435,231	-		OH686_16420	0.19	+0.8
3,435,231	-		OH686_16420	0.19	+1.2
3,435,231	-		OH686_16420	0.19	-1.5
3,435,231	-		OH686_16420	0.19	-0.3
3,435,231	-		OH686_16420	0.19	+2.2
3,435,331	+		OH686_16420	0.23	-0.6
3,435,631	+		OH686_16420	0.35	+0.5
3,435,631	+		OH686_16420	0.35	-0.1
3,435,631	+		OH686_16420	0.35	+0.6
3,435,631	+		OH686_16420	0.35	+0.1
3,435,631	+		OH686_16420	0.35	+0.4
3,435,631	+		OH686_16420	0.35	+0.6
3,435,631	+		OH686_16420	0.35	-0.2
3,435,632	-		OH686_16420	0.35	-0.9
3,435,632	-		OH686_16420	0.35	+0.6
3,435,632	-		OH686_16420	0.35	-0.1
3,435,632	-		OH686_16420	0.35	+0.4
3,435,632	-		OH686_16420	0.35	+0.6
3,435,704	+		OH686_16420	0.38	-0.3
3,435,704	+		OH686_16420	0.38	-1.9
3,435,704	+		OH686_16420	0.38	+0.2
3,435,705	-		OH686_16420	0.38	-1.0
3,435,705	-		OH686_16420	0.38	-0.6
3,435,705	-		OH686_16420	0.38	+0.8
3,435,705	-		OH686_16420	0.38	+0.7
3,435,809	+		OH686_16420	0.42	+1.4
3,435,878	+		OH686_16420	0.44	-0.0
3,435,878	+		OH686_16420	0.44	+0.2
3,435,878	+		OH686_16420	0.44	+0.2
3,435,878	+		OH686_16420	0.44	+0.1
3,435,878	+		OH686_16420	0.44	+0.3
3,435,878	+		OH686_16420	0.44	+0.2
3,435,878	+		OH686_16420	0.44	+0.8
3,435,878	+		OH686_16420	0.44	+1.1
3,435,878	+		OH686_16420	0.44	+0.1
3,435,878	+		OH686_16420	0.44	+0.9
3,435,879	-		OH686_16420	0.44	+0.5
3,435,879	-		OH686_16420	0.44	+0.4
3,435,879	-		OH686_16420	0.44	+1.0
3,435,879	-		OH686_16420	0.44	+0.1
3,435,879	-		OH686_16420	0.44	-0.1
3,435,879	-		OH686_16420	0.44	+0.4
3,436,103	+		OH686_16420	0.53	-0.4
3,436,103	+		OH686_16420	0.53	+0.5
3,436,104	-		OH686_16420	0.53	-0.4
3,436,104	-		OH686_16420	0.53	+0.4
3,436,104	-		OH686_16420	0.53	+1.0
3,436,248	-		OH686_16420	0.59	+0.9
3,436,697	+		OH686_16420	0.76	-0.2
3,436,722	-		OH686_16420	0.77	-0.5
3,436,752	-		OH686_16420	0.78	+0.4
3,437,169	-				+0.0
3,437,169	-				+1.3
3,437,316	+				-0.5
3,437,316	+				+0.2
3,437,316	+				+0.4
3,437,417	+		OH686_16425	0.19	-0.8
3,437,418	-		OH686_16425	0.19	+0.2
3,437,418	-		OH686_16425	0.19	+0.3
3,437,638	-		OH686_16425	0.84	-0.5
3,437,638	-		OH686_16425	0.84	-0.0
3,437,746	+				-0.5
3,437,746	+				+1.0
3,437,746	+				-0.6
3,437,746	+				+0.7
3,437,746	+				+0.6
3,437,746	+				-0.9
3,437,747	-				+0.5
3,437,887	+				-0.3
3,437,887	+				-0.3
3,437,887	+				+0.5
3,437,887	+				+0.4
3,437,887	+				+0.5
3,437,887	+				-0.1
3,437,887	+				+0.4
3,437,887	+				-0.1
3,437,887	+				+0.9
3,437,887	+				-0.6
3,437,887	+				-0.2
3,437,887	+				-0.5
3,437,887	+				-1.0
3,437,887	+				-0.4
3,437,887	+				+1.5
3,437,887	+				+0.4
3,437,887	+				+0.1
3,437,887	+				-0.2
3,437,887	+				+0.3
3,437,887	+				+0.7
3,437,887	+				-0.2
3,437,887	+				-0.1
3,437,887	+				+0.4
3,437,888	-				+0.2
3,437,888	-				+2.3
3,437,888	-				-0.1
3,437,888	-				+0.1
3,437,888	-				-0.4
3,437,888	-				-0.9
3,437,888	-				+0.3
3,437,888	-				+0.3
3,437,888	-				+0.4
3,437,888	-				-0.0
3,437,888	-				-0.5
3,437,888	-				-0.1
3,437,888	-				+1.8
3,437,888	-				+0.4
3,437,888	-				+0.8
3,437,888	-				+0.6
3,437,888	-				+0.8
3,437,888	-				+0.1
3,437,888	-				+0.1
3,437,888	-				-1.3
3,437,888	-				-0.2
3,437,888	-				+0.4
3,437,888	-				-0.7
3,437,888	-				+0.6
3,437,888	-				+1.2
3,437,888	-				-0.6
3,437,888	-				+0.8
3,437,888	-				-0.1
3,437,888	-				-0.7
3,438,156	+		OH686_16430	0.20	-0.2
3,438,156	+		OH686_16430	0.20	+0.3
3,438,156	+		OH686_16430	0.20	-0.1
3,438,156	+		OH686_16430	0.20	-0.0
3,438,156	+		OH686_16430	0.20	-0.2
3,438,156	+		OH686_16430	0.20	-0.3
3,438,156	+		OH686_16430	0.20	-0.5
3,438,156	+		OH686_16430	0.20	-0.1
3,438,156	+		OH686_16430	0.20	+0.4
3,438,157	-		OH686_16430	0.20	-0.9
3,438,157	-		OH686_16430	0.20	+0.1
3,438,157	-		OH686_16430	0.20	+0.7
3,438,157	-		OH686_16430	0.20	+0.8