Strain Fitness in Pseudomonas sp. S08-1 around OH686_05730

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,153,274	+		OH686_05720	0.77	-1.1
1,153,274	+		OH686_05720	0.77	-1.1
1,153,274	+		OH686_05720	0.77	-0.3
1,153,275	-		OH686_05720	0.77	-0.8
1,153,275	-		OH686_05720	0.77	-1.1
1,153,379	+		OH686_05720	0.87	+0.3
1,153,379	+		OH686_05720	0.87	+1.4
1,153,379	+		OH686_05720	0.87	+0.3
1,153,379	+		OH686_05720	0.87	+0.2
1,153,380	-		OH686_05720	0.87	-1.5
1,153,380	-		OH686_05720	0.87	-1.5
1,153,380	-		OH686_05720	0.87	+0.5
1,153,388	+		OH686_05720	0.87	+1.9
1,153,415	+				+0.4
1,153,415	+				+0.4
1,153,415	+				+0.0
1,153,415	+				-0.2
1,153,416	-				+0.3
1,153,416	-				+0.2
1,153,445	+				+0.6
1,153,574	+				-0.7
1,153,574	+				-0.3
1,153,574	+				+1.5
1,153,574	+				-0.5
1,153,574	+				-0.4
1,153,574	+				+0.7
1,153,574	+				-0.8
1,153,574	+				-0.2
1,153,574	+				-0.8
1,153,575	-				+0.2
1,153,575	-				-0.2
1,153,575	-				-1.4
1,153,575	-				+0.1
1,153,575	-				-0.4
1,153,575	-				-1.0
1,153,575	-				+0.3
1,153,575	-				+0.4
1,153,575	-				-0.1
1,153,623	-				+1.0
1,153,623	-				-0.2
1,153,662	+				+0.0
1,153,662	+				-0.8
1,153,662	+				+1.1
1,153,662	+				-1.9
1,153,662	+				+1.5
1,153,662	+				+0.1
1,153,662	+				-0.3
1,153,662	+				+0.2
1,153,662	+				+0.3
1,153,662	+				-0.5
1,153,663	-				+0.3
1,153,663	-				+0.0
1,153,663	-				+0.7
1,153,663	-				-0.1
1,153,663	-				+0.7
1,153,663	-				-1.0
1,153,663	-				+0.1
1,153,663	-				+1.0
1,153,663	-				+0.9
1,153,663	-				-0.6
1,153,688	+				-0.4
1,153,688	+				-0.5
1,153,688	+				+0.5
1,153,688	+				-0.5
1,153,689	-				-0.3
1,153,689	-				+0.0
1,153,689	-				+0.2
1,153,699	+				+0.5
1,153,699	+				+1.1
1,153,699	+				+0.3
1,153,700	-				+0.1
1,153,778	+		OH686_05725	0.17	-0.6
1,153,779	-		OH686_05725	0.17	-0.5
1,153,779	-		OH686_05725	0.17	+0.2
1,153,782	+		OH686_05725	0.17	+0.1
1,153,782	+		OH686_05725	0.17	-0.4
1,153,782	+		OH686_05725	0.17	+0.8
1,153,782	+		OH686_05725	0.17	+0.5
1,153,782	+		OH686_05725	0.17	-1.6
1,153,782	+		OH686_05725	0.17	+0.7
1,153,782	+		OH686_05725	0.17	+0.6
1,153,782	+		OH686_05725	0.17	-2.9
1,153,782	+		OH686_05725	0.17	-1.1
1,153,782	+		OH686_05725	0.17	+0.3
1,153,782	+		OH686_05725	0.17	+0.8
1,153,782	+		OH686_05725	0.17	-0.3
1,153,782	+		OH686_05725	0.17	-0.3
1,153,782	+		OH686_05725	0.17	-0.1
1,153,782	+		OH686_05725	0.17	+0.3
1,153,782	+		OH686_05725	0.17	+0.4
1,153,782	+		OH686_05725	0.17	+0.0
1,153,782	+		OH686_05725	0.17	-1.0
1,153,782	+		OH686_05725	0.17	-0.0
1,153,782	+		OH686_05725	0.17	+0.3
1,153,783	-		OH686_05725	0.18	-0.2
1,153,783	-		OH686_05725	0.18	+0.9
1,153,783	-		OH686_05725	0.18	-1.5
1,153,783	-		OH686_05725	0.18	+0.4
1,153,783	-		OH686_05725	0.18	-1.2
1,153,783	-		OH686_05725	0.18	-0.4
1,153,783	-		OH686_05725	0.18	-1.2
1,153,783	-		OH686_05725	0.18	+0.5
1,153,783	-		OH686_05725	0.18	-0.4
1,153,783	-		OH686_05725	0.18	-1.4
1,153,783	-		OH686_05725	0.18	-0.6
1,153,789	+		OH686_05725	0.19	-1.5
1,153,789	+		OH686_05725	0.19	+0.2
1,153,789	+		OH686_05725	0.19	+0.2
1,153,789	+		OH686_05725	0.19	+0.4
1,153,789	+		OH686_05725	0.19	+0.7
1,153,789	+		OH686_05725	0.19	-0.2
1,153,789	+		OH686_05725	0.19	-0.1
1,153,789	+		OH686_05725	0.19	+0.4
1,153,789	+		OH686_05725	0.19	+0.4
1,153,789	+		OH686_05725	0.19	+0.9
1,153,789	+		OH686_05725	0.19	+0.5
1,153,789	+		OH686_05725	0.19	-0.7
1,153,789	+		OH686_05725	0.19	-0.1
1,153,790	-		OH686_05725	0.19	-0.2
1,153,790	-		OH686_05725	0.19	-0.5
1,153,790	-		OH686_05725	0.19	-1.5
1,153,790	-		OH686_05725	0.19	+0.1
1,153,790	-		OH686_05725	0.19	+0.1
1,153,790	-		OH686_05725	0.19	-0.5
1,153,790	-		OH686_05725	0.19	+0.8
1,153,790	-		OH686_05725	0.19	+0.3
1,153,790	-		OH686_05725	0.19	+0.3
1,153,790	-		OH686_05725	0.19	+0.3
1,153,793	+		OH686_05725	0.20	+0.4
1,153,793	+		OH686_05725	0.20	-0.4
1,153,793	+		OH686_05725	0.20	+0.6
1,153,793	+		OH686_05725	0.20	-0.2
1,153,793	+		OH686_05725	0.20	+1.4
1,153,794	-		OH686_05725	0.20	-0.4
1,153,794	-		OH686_05725	0.20	-0.6
1,153,794	-		OH686_05725	0.20	+0.1
1,153,794	-		OH686_05725	0.20	-0.6
1,153,794	-		OH686_05725	0.20	+0.5
1,153,794	-		OH686_05725	0.20	-0.0
1,153,794	-		OH686_05725	0.20	+0.1
1,153,794	-		OH686_05725	0.20	-1.4
1,153,794	-		OH686_05725	0.20	-0.9
1,153,794	-		OH686_05725	0.20	-0.1
1,153,834	+		OH686_05725	0.29	-0.5
1,153,834	+		OH686_05725	0.29	-0.6
1,153,911	-		OH686_05725	0.46	-1.1
1,153,955	+		OH686_05725	0.56	-0.8
1,153,999	+		OH686_05725	0.65	-0.6
1,153,999	+		OH686_05725	0.65	+0.7
1,154,000	-		OH686_05725	0.66	+0.1
1,154,032	+		OH686_05725	0.73	+0.3
1,154,032	+		OH686_05725	0.73	+0.3
1,154,033	-		OH686_05725	0.73	-0.7
1,154,033	-		OH686_05725	0.73	+0.4
1,154,033	-		OH686_05725	0.73	-0.7
1,154,033	-		OH686_05725	0.73	-0.3
1,154,059	+		OH686_05725	0.79	+0.2
1,154,059	+		OH686_05725	0.79	-0.0
1,154,059	+		OH686_05725	0.79	+0.8
1,154,059	+		OH686_05725	0.79	-0.8
1,154,059	+		OH686_05725	0.79	+0.9
1,154,059	+		OH686_05725	0.79	+0.3
1,154,059	+		OH686_05725	0.79	-0.8
1,154,059	+		OH686_05725	0.79	-0.4
1,154,060	-		OH686_05725	0.79	-0.8
1,154,060	-		OH686_05725	0.79	+0.1
1,154,060	-		OH686_05725	0.79	-0.2
1,154,060	-		OH686_05725	0.79	-0.2
1,154,060	-		OH686_05725	0.79	-0.0
1,154,060	-		OH686_05725	0.79	-0.6
1,154,060	-		OH686_05725	0.79	+0.1
1,154,060	-		OH686_05725	0.79	+0.2
1,154,060	-		OH686_05725	0.79	+0.1
1,154,060	-		OH686_05725	0.79	-0.3
1,154,103	+		OH686_05725	0.88	-0.2
1,154,103	+		OH686_05725	0.88	+0.0
1,154,103	+		OH686_05725	0.88	-2.5
1,154,103	+		OH686_05725	0.88	+0.5
1,154,104	-		OH686_05725	0.89	-0.5
1,154,104	-		OH686_05725	0.89	-0.3
1,154,144	+				-0.3
1,154,144	+				+0.3
1,154,144	+				-1.7
1,154,144	+				-0.3
1,154,144	+				-1.7
1,154,144	+				-0.1
1,154,144	+				-0.1
1,154,144	+				-0.7
1,154,144	+				-1.3
1,154,145	-				-0.4
1,154,145	-				+0.1
1,154,145	-				-0.1
1,154,145	-				-0.7
1,154,145	-				-0.0
1,154,145	-				-0.1
1,154,194	+				-0.1
1,154,194	+				-1.2
1,154,194	+				+0.4
1,154,194	+				+0.1
1,154,288	-				-0.6
1,154,288	-				+0.0
1,154,308	+				+1.0
1,154,308	+				-0.0
1,154,309	-				-0.1
1,154,309	-				+1.0
1,154,309	-				-0.2
1,154,309	-				-0.6
1,154,368	+				+0.7
1,154,369	-				-0.3
1,154,369	-				-0.0
1,154,369	-				+0.9
1,154,403	+				-0.3
1,154,404	-				+0.5
1,154,464	+				-0.4
1,154,465	-				-0.8
1,154,465	-				-0.0
1,154,465	-				-0.1
1,154,518	+				-0.1
1,154,806	+		OH686_05730	0.15	-0.3
1,154,807	-		OH686_05730	0.15	+1.0
1,155,517	+		OH686_05730	0.33	-0.7
1,155,517	+		OH686_05730	0.33	+0.3
1,155,518	-		OH686_05730	0.33	+1.4
1,155,518	-		OH686_05730	0.33	-0.1
1,155,518	-		OH686_05730	0.33	-0.5
1,155,585	-		OH686_05730	0.34	-0.1
1,155,655	+		OH686_05730	0.36	-0.1
1,155,655	+		OH686_05730	0.36	-0.7
1,155,656	-		OH686_05730	0.36	-0.2
1,155,656	-		OH686_05730	0.36	+0.1
1,155,709	+		OH686_05730	0.37	-0.8
1,155,709	+		OH686_05730	0.37	-1.1
1,155,709	+		OH686_05730	0.37	-1.1
1,155,709	+		OH686_05730	0.37	-0.6
1,155,710	-		OH686_05730	0.37	-0.2
1,155,710	-		OH686_05730	0.37	-0.9
1,155,710	-		OH686_05730	0.37	-0.1
1,155,718	+		OH686_05730	0.37	-0.1
1,155,718	+		OH686_05730	0.37	+0.7
1,155,719	-		OH686_05730	0.37	-0.0
1,155,719	-		OH686_05730	0.37	+0.2
1,155,931	+		OH686_05730	0.43	-0.4
1,155,931	+		OH686_05730	0.43	-0.7
1,155,931	+		OH686_05730	0.43	-0.1
1,155,932	-		OH686_05730	0.43	+0.2
1,155,932	-		OH686_05730	0.43	+1.3
1,155,932	-		OH686_05730	0.43	+0.3
1,156,174	+		OH686_05730	0.49	+2.0
1,156,175	-		OH686_05730	0.49	-0.8
1,156,175	-		OH686_05730	0.49	+0.2
1,156,175	-		OH686_05730	0.49	-0.3
1,156,209	-		OH686_05730	0.50	-0.8
1,156,246	+		OH686_05730	0.50	-0.1
1,156,246	+		OH686_05730	0.50	-0.7
1,156,246	+		OH686_05730	0.50	-0.7
1,156,247	-		OH686_05730	0.50	+0.1
1,156,247	-		OH686_05730	0.50	+0.8
1,156,247	-		OH686_05730	0.50	+0.4
1,156,415	+		OH686_05730	0.55	-0.6
1,156,416	-		OH686_05730	0.55	-0.7
1,156,426	-		OH686_05730	0.55	+0.3
1,156,493	-		OH686_05730	0.57	-0.4
1,156,493	-		OH686_05730	0.57	+0.9
1,156,493	-		OH686_05730	0.57	-0.5
1,156,493	-		OH686_05730	0.57	+0.6
1,156,493	-		OH686_05730	0.57	-1.1
1,156,493	-		OH686_05730	0.57	-0.4
1,156,493	-		OH686_05730	0.57	+0.7
1,156,743	-		OH686_05730	0.63	+0.7
1,157,005	+		OH686_05730	0.69	-0.9
1,157,005	+		OH686_05730	0.69	+0.3
1,157,006	-		OH686_05730	0.69	-0.8
1,157,113	+		OH686_05730	0.72	+0.7
1,157,114	-		OH686_05730	0.72	+0.7
1,157,120	-		OH686_05730	0.72	+1.2
1,157,269	+		OH686_05730	0.76	-0.6
1,157,269	+		OH686_05730	0.76	-0.7
1,157,269	+		OH686_05730	0.76	+0.9
1,157,269	+		OH686_05730	0.76	+0.2
1,157,269	+		OH686_05730	0.76	-0.4
1,157,270	-		OH686_05730	0.76	-0.9
1,157,270	-		OH686_05730	0.76	-0.0
1,157,498	-		OH686_05730	0.81	+0.7
1,157,515	+		OH686_05730	0.82	+0.7
1,157,516	-		OH686_05730	0.82	+0.1
1,157,561	+		OH686_05730	0.83	+0.3
1,157,562	-		OH686_05730	0.83	-1.0
1,157,562	-		OH686_05730	0.83	+0.1
1,157,641	+		OH686_05730	0.85	-0.4
1,157,642	-		OH686_05730	0.85	+0.1
1,157,704	+		OH686_05730	0.86	+0.1
1,157,704	+		OH686_05730	0.86	+0.1
1,157,704	+		OH686_05730	0.86	-0.1
1,157,705	-		OH686_05730	0.86	+0.1
1,158,271	+				+0.1
1,158,271	+				-0.5
1,158,271	+				-0.5
1,158,272	-				-0.5
1,158,272	-				+0.1
1,158,428	+				-0.5
1,158,428	+				-0.5
1,158,428	+				-0.3
1,158,428	+				+0.7
1,158,428	+				+0.6
1,158,428	+				-0.0
1,158,428	+				-0.8
1,158,428	+				-1.1
1,158,428	+				+0.8
1,158,428	+				-0.2
1,158,429	-				+0.1
1,158,429	-				-1.2
1,158,429	-				-0.9
1,158,429	-				+0.2
1,158,429	-				-0.1
1,158,429	-				+0.6
1,158,429	-				+0.9
1,158,429	-				+0.0
1,158,432	+				-0.3
1,158,432	+				-0.8
1,158,432	+				+0.1
1,158,432	+				+2.3
1,158,432	+				+0.6
1,158,432	+				+1.2
1,158,432	+				-0.3
1,158,432	+				-1.2
1,158,432	+				-0.9
1,158,432	+				+0.7
1,158,432	+				+0.2
1,158,432	+				-1.5
1,158,432	+				+0.9
1,158,432	+				+0.1
1,158,432	+				+0.5
1,158,433	-				+1.1
1,158,433	-				+0.0
1,158,433	-				+0.4
1,158,433	-				+0.0
1,158,433	-				+0.3
1,158,433	-				+0.3
1,158,433	-				+0.0
1,158,433	-				+0.5
1,158,433	-				+0.2
1,158,433	-				-0.1
1,158,433	-				-0.2
1,158,433	-				-2.2
1,158,433	-				+0.1
1,158,433	-				-0.1
1,158,433	-				-1.5
1,158,433	-				+0.5
1,158,433	-				-0.3
1,158,433	-				-0.2
1,158,433	-				-0.6
1,158,433	-				+0.2
1,158,433	-				+0.4
1,158,433	-				-0.1
1,158,433	-				-0.8
1,158,433	-				-1.2
1,158,433	-				+0.6
1,158,468	+				-0.8
1,158,468	+				-0.8
1,158,468	+				-1.3
1,158,468	+				-0.5
1,158,469	-				+0.9
1,158,469	-				-0.8
1,158,469	-				-0.6
1,158,849	+		OH686_05735	0.28	-1.0
1,158,850	-		OH686_05735	0.28	-0.3
1,158,850	-		OH686_05735	0.28	+0.3
1,158,914	+		OH686_05735	0.33	-2.3