Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4350 and Echvi_4351 are separated by 131 nucleotides Echvi_4351 and Echvi_4352 are separated by 418 nucleotides Echvi_4352 and Echvi_4353 are separated by 6 nucleotides
Echvi_4350: Echvi_4350 - Site-specific recombinase XerD, at 5,207,309 to 5,208,577
_4350
Echvi_4351: Echvi_4351 - DNA repair proteins, at 5,208,709 to 5,209,044
_4351
Echvi_4352: Echvi_4352 - hypothetical protein, at 5,209,463 to 5,209,672
_4352
Echvi_4353: Echvi_4353 - Arylsulfatase A and related enzymes, at 5,209,679 to 5,211,124
_4353
Position (kb) 5208
5209
5210 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5208.722 kb on + strand at 5208.999 kb on + strand, within Echvi_4351 at 5209.000 kb on - strand, within Echvi_4351 at 5209.044 kb on + strand at 5209.072 kb on - strand at 5209.087 kb on - strand at 5209.162 kb on + strand at 5209.210 kb on + strand at 5209.228 kb on + strand at 5209.228 kb on + strand at 5209.229 kb on - strand at 5209.247 kb on + strand at 5209.247 kb on + strand at 5209.248 kb on - strand at 5209.272 kb on + strand at 5209.272 kb on + strand at 5209.272 kb on + strand at 5209.272 kb on + strand at 5209.275 kb on + strand at 5209.276 kb on - strand at 5209.290 kb on + strand at 5209.314 kb on + strand at 5209.315 kb on - strand at 5209.315 kb on - strand at 5209.315 kb on - strand at 5209.604 kb on - strand, within Echvi_4352 at 5209.618 kb on - strand, within Echvi_4352 at 5209.653 kb on - strand at 5209.677 kb on + strand at 5209.694 kb on + strand at 5209.761 kb on + strand at 5209.844 kb on + strand, within Echvi_4353 at 5209.845 kb on - strand, within Echvi_4353 at 5209.845 kb on - strand, within Echvi_4353 at 5209.863 kb on + strand, within Echvi_4353 at 5209.863 kb on + strand, within Echvi_4353 at 5209.864 kb on - strand, within Echvi_4353 at 5209.943 kb on - strand, within Echvi_4353 at 5209.978 kb on + strand, within Echvi_4353 at 5209.978 kb on + strand, within Echvi_4353 at 5209.979 kb on - strand, within Echvi_4353 at 5209.980 kb on + strand, within Echvi_4353 at 5209.980 kb on + strand, within Echvi_4353 at 5209.981 kb on - strand, within Echvi_4353 at 5209.996 kb on + strand, within Echvi_4353
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 5,208,722 + +1.0 5,208,999 + Echvi_4351 0.86 +0.8 5,209,000 - Echvi_4351 0.87 -1.6 5,209,044 + +0.4 5,209,072 - +0.0 5,209,087 - +0.8 5,209,162 + -0.2 5,209,210 + -1.2 5,209,228 + -1.0 5,209,228 + +0.2 5,209,229 - +0.8 5,209,247 + +0.5 5,209,247 + -0.6 5,209,248 - -1.2 5,209,272 + +0.9 5,209,272 + -0.5 5,209,272 + -0.4 5,209,272 + +0.3 5,209,275 + -1.2 5,209,276 - +0.4 5,209,290 + -0.0 5,209,314 + -0.3 5,209,315 - -1.4 5,209,315 - -0.2 5,209,315 - +0.2 5,209,604 - Echvi_4352 0.67 -0.1 5,209,618 - Echvi_4352 0.74 -0.1 5,209,653 - +0.1 5,209,677 + -1.8 5,209,694 + +1.1 5,209,761 + -0.5 5,209,844 + Echvi_4353 0.11 +0.2 5,209,845 - Echvi_4353 0.11 -0.3 5,209,845 - Echvi_4353 0.11 +2.1 5,209,863 + Echvi_4353 0.13 +1.1 5,209,863 + Echvi_4353 0.13 -0.1 5,209,864 - Echvi_4353 0.13 -0.4 5,209,943 - Echvi_4353 0.18 +0.4 5,209,978 + Echvi_4353 0.21 -2.3 5,209,978 + Echvi_4353 0.21 +0.9 5,209,979 - Echvi_4353 0.21 -0.2 5,209,980 + Echvi_4353 0.21 -0.4 5,209,980 + Echvi_4353 0.21 -0.1 5,209,981 - Echvi_4353 0.21 +0.1 5,209,996 + Echvi_4353 0.22 +0.0
Or see this region's nucleotide sequence