Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4053 and Echvi_4054 are separated by 128 nucleotides Echvi_4054 and Echvi_4055 are separated by 12 nucleotides Echvi_4055 and Echvi_4056 are separated by 2 nucleotides
Echvi_4053: Echvi_4053 - Predicted transcriptional regulator, contains C-terminal CBS domains, at 4,861,564 to 4,862,025
_4053
Echvi_4054: Echvi_4054 - hypothetical protein, at 4,862,154 to 4,862,645
_4054
Echvi_4055: Echvi_4055 - Uncharacterized protein involved in copper resistance, at 4,862,658 to 4,863,401
_4055
Echvi_4056: Echvi_4056 - Asparaginase, at 4,863,404 to 4,864,387
_4056
Position (kb)
4862
4863
4864 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4861.664 kb on - strand, within Echvi_4053 at 4862.046 kb on + strand at 4862.047 kb on - strand at 4862.263 kb on + strand, within Echvi_4054 at 4862.288 kb on + strand, within Echvi_4054 at 4862.319 kb on - strand, within Echvi_4054 at 4862.319 kb on - strand, within Echvi_4054 at 4862.319 kb on - strand, within Echvi_4054 at 4862.342 kb on - strand, within Echvi_4054 at 4862.350 kb on - strand, within Echvi_4054 at 4862.350 kb on - strand, within Echvi_4054 at 4862.416 kb on + strand, within Echvi_4054 at 4862.416 kb on + strand, within Echvi_4054 at 4862.420 kb on + strand, within Echvi_4054 at 4862.420 kb on + strand, within Echvi_4054 at 4862.421 kb on - strand, within Echvi_4054 at 4862.455 kb on + strand, within Echvi_4054 at 4862.553 kb on + strand, within Echvi_4054 at 4862.554 kb on - strand, within Echvi_4054 at 4862.554 kb on - strand, within Echvi_4054 at 4862.592 kb on + strand, within Echvi_4054 at 4862.600 kb on + strand at 4862.601 kb on - strand at 4862.621 kb on + strand at 4862.624 kb on - strand at 4862.637 kb on + strand at 4862.659 kb on + strand at 4862.879 kb on + strand, within Echvi_4055 at 4862.897 kb on + strand, within Echvi_4055 at 4862.898 kb on - strand, within Echvi_4055 at 4862.957 kb on + strand, within Echvi_4055 at 4863.151 kb on - strand, within Echvi_4055 at 4863.262 kb on + strand, within Echvi_4055 at 4863.396 kb on - strand at 4863.413 kb on - strand at 4863.459 kb on + strand at 4863.460 kb on - strand at 4863.463 kb on + strand at 4863.463 kb on + strand at 4863.463 kb on + strand at 4863.463 kb on + strand at 4863.464 kb on - strand at 4863.464 kb on - strand at 4863.505 kb on + strand, within Echvi_4056 at 4863.621 kb on - strand, within Echvi_4056 at 4863.702 kb on + strand, within Echvi_4056 at 4863.703 kb on - strand, within Echvi_4056 at 4863.751 kb on + strand, within Echvi_4056 at 4863.766 kb on + strand, within Echvi_4056 at 4863.772 kb on + strand, within Echvi_4056 at 4863.773 kb on - strand, within Echvi_4056 at 4863.773 kb on - strand, within Echvi_4056 at 4863.809 kb on + strand, within Echvi_4056 at 4863.810 kb on - strand, within Echvi_4056 at 4863.810 kb on - strand, within Echvi_4056 at 4863.818 kb on + strand, within Echvi_4056 at 4863.819 kb on - strand, within Echvi_4056 at 4863.824 kb on - strand, within Echvi_4056 at 4863.853 kb on + strand, within Echvi_4056 at 4863.855 kb on + strand, within Echvi_4056 at 4863.865 kb on + strand, within Echvi_4056 at 4863.866 kb on - strand, within Echvi_4056 at 4863.883 kb on - strand, within Echvi_4056 at 4863.920 kb on + strand, within Echvi_4056 at 4863.920 kb on + strand, within Echvi_4056 at 4863.952 kb on + strand, within Echvi_4056 at 4864.043 kb on + strand, within Echvi_4056 at 4864.044 kb on - strand, within Echvi_4056 at 4864.075 kb on + strand, within Echvi_4056 at 4864.075 kb on + strand, within Echvi_4056 at 4864.075 kb on + strand, within Echvi_4056 at 4864.096 kb on + strand, within Echvi_4056 at 4864.097 kb on - strand, within Echvi_4056 at 4864.176 kb on - strand, within Echvi_4056 at 4864.228 kb on + strand, within Echvi_4056 at 4864.228 kb on + strand, within Echvi_4056 at 4864.308 kb on - strand at 4864.331 kb on + strand at 4864.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 4,861,664 - Echvi_4053 0.22 -1.9 4,862,046 + -0.8 4,862,047 - +0.0 4,862,263 + Echvi_4054 0.22 -0.1 4,862,288 + Echvi_4054 0.27 -0.4 4,862,319 - Echvi_4054 0.34 +0.6 4,862,319 - Echvi_4054 0.34 +1.0 4,862,319 - Echvi_4054 0.34 -0.5 4,862,342 - Echvi_4054 0.38 -1.9 4,862,350 - Echvi_4054 0.40 -0.1 4,862,350 - Echvi_4054 0.40 -0.2 4,862,416 + Echvi_4054 0.53 +0.7 4,862,416 + Echvi_4054 0.53 +0.1 4,862,420 + Echvi_4054 0.54 +0.1 4,862,420 + Echvi_4054 0.54 +0.1 4,862,421 - Echvi_4054 0.54 +0.0 4,862,455 + Echvi_4054 0.61 -1.8 4,862,553 + Echvi_4054 0.81 -1.4 4,862,554 - Echvi_4054 0.81 -0.4 4,862,554 - Echvi_4054 0.81 +1.2 4,862,592 + Echvi_4054 0.89 -0.1 4,862,600 + -0.5 4,862,601 - -1.3 4,862,621 + -0.7 4,862,624 - -0.4 4,862,637 + -0.1 4,862,659 + -0.4 4,862,879 + Echvi_4055 0.30 +0.2 4,862,897 + Echvi_4055 0.32 +0.4 4,862,898 - Echvi_4055 0.32 -0.9 4,862,957 + Echvi_4055 0.40 +0.7 4,863,151 - Echvi_4055 0.66 -1.7 4,863,262 + Echvi_4055 0.81 -2.3 4,863,396 - -0.7 4,863,413 - -0.3 4,863,459 + +0.1 4,863,460 - -0.2 4,863,463 + -0.9 4,863,463 + -2.8 4,863,463 + +2.0 4,863,463 + +0.2 4,863,464 - -1.2 4,863,464 - -1.0 4,863,505 + Echvi_4056 0.10 +1.1 4,863,621 - Echvi_4056 0.22 -0.0 4,863,702 + Echvi_4056 0.30 -0.7 4,863,703 - Echvi_4056 0.30 -1.5 4,863,751 + Echvi_4056 0.35 -0.2 4,863,766 + Echvi_4056 0.37 -2.1 4,863,772 + Echvi_4056 0.37 +0.4 4,863,773 - Echvi_4056 0.38 -0.2 4,863,773 - Echvi_4056 0.38 -0.3 4,863,809 + Echvi_4056 0.41 -0.5 4,863,810 - Echvi_4056 0.41 +0.3 4,863,810 - Echvi_4056 0.41 +1.4 4,863,818 + Echvi_4056 0.42 +0.5 4,863,819 - Echvi_4056 0.42 +0.1 4,863,824 - Echvi_4056 0.43 +0.4 4,863,853 + Echvi_4056 0.46 +0.7 4,863,855 + Echvi_4056 0.46 -0.2 4,863,865 + Echvi_4056 0.47 -0.7 4,863,866 - Echvi_4056 0.47 +1.2 4,863,883 - Echvi_4056 0.49 -1.1 4,863,920 + Echvi_4056 0.52 +0.1 4,863,920 + Echvi_4056 0.52 -0.9 4,863,952 + Echvi_4056 0.56 +0.1 4,864,043 + Echvi_4056 0.65 -0.2 4,864,044 - Echvi_4056 0.65 -1.9 4,864,075 + Echvi_4056 0.68 +0.4 4,864,075 + Echvi_4056 0.68 +1.5 4,864,075 + Echvi_4056 0.68 +0.8 4,864,096 + Echvi_4056 0.70 +0.6 4,864,097 - Echvi_4056 0.70 -1.2 4,864,176 - Echvi_4056 0.78 -0.9 4,864,228 + Echvi_4056 0.84 +1.2 4,864,228 + Echvi_4056 0.84 -0.4 4,864,308 - +0.6 4,864,331 + +0.2 4,864,379 - +0.2
Or see this region's nucleotide sequence