Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3556 and Echvi_3557 are separated by 9 nucleotides Echvi_3557 and Echvi_3558 are separated by 247 nucleotides
Echvi_3556: Echvi_3556 - Phosphate-selective porin O and P., at 4,216,254 to 4,217,438
_3556
Echvi_3557: Echvi_3557 - Protein of unknown function (DUF2874)., at 4,217,448 to 4,217,894
_3557
Echvi_3558: Echvi_3558 - His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 4,218,142 to 4,219,413
_3558
Position (kb)
4217
4218 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4216.471 kb on - strand, within Echvi_3556 at 4216.510 kb on + strand, within Echvi_3556 at 4216.511 kb on - strand, within Echvi_3556 at 4216.551 kb on + strand, within Echvi_3556 at 4216.598 kb on - strand, within Echvi_3556 at 4216.598 kb on - strand, within Echvi_3556 at 4216.598 kb on - strand, within Echvi_3556 at 4216.598 kb on - strand, within Echvi_3556 at 4216.664 kb on - strand, within Echvi_3556 at 4216.664 kb on - strand, within Echvi_3556 at 4216.664 kb on - strand, within Echvi_3556 at 4216.699 kb on - strand, within Echvi_3556 at 4216.714 kb on + strand, within Echvi_3556 at 4216.714 kb on + strand, within Echvi_3556 at 4216.715 kb on - strand, within Echvi_3556 at 4216.715 kb on - strand, within Echvi_3556 at 4216.746 kb on + strand, within Echvi_3556 at 4216.747 kb on - strand, within Echvi_3556 at 4216.772 kb on + strand, within Echvi_3556 at 4216.792 kb on - strand, within Echvi_3556 at 4216.823 kb on - strand, within Echvi_3556 at 4216.843 kb on + strand, within Echvi_3556 at 4216.843 kb on + strand, within Echvi_3556 at 4216.843 kb on + strand, within Echvi_3556 at 4216.844 kb on - strand, within Echvi_3556 at 4216.884 kb on - strand, within Echvi_3556 at 4216.884 kb on - strand, within Echvi_3556 at 4216.885 kb on + strand, within Echvi_3556 at 4216.886 kb on - strand, within Echvi_3556 at 4216.894 kb on - strand, within Echvi_3556 at 4216.939 kb on + strand, within Echvi_3556 at 4216.940 kb on - strand, within Echvi_3556 at 4217.015 kb on + strand, within Echvi_3556 at 4217.015 kb on + strand, within Echvi_3556 at 4217.015 kb on + strand, within Echvi_3556 at 4217.104 kb on + strand, within Echvi_3556 at 4217.105 kb on - strand, within Echvi_3556 at 4217.105 kb on - strand, within Echvi_3556 at 4217.105 kb on - strand, within Echvi_3556 at 4217.105 kb on - strand, within Echvi_3556 at 4217.125 kb on - strand, within Echvi_3556 at 4217.136 kb on - strand, within Echvi_3556 at 4217.170 kb on + strand, within Echvi_3556 at 4217.278 kb on - strand, within Echvi_3556 at 4217.296 kb on + strand, within Echvi_3556 at 4217.297 kb on - strand, within Echvi_3556 at 4217.308 kb on + strand, within Echvi_3556 at 4217.385 kb on + strand at 4217.428 kb on - strand at 4217.450 kb on - strand at 4217.469 kb on + strand at 4217.546 kb on + strand, within Echvi_3557 at 4217.546 kb on + strand, within Echvi_3557 at 4217.649 kb on + strand, within Echvi_3557 at 4217.728 kb on + strand, within Echvi_3557 at 4217.853 kb on - strand at 4217.865 kb on + strand at 4217.866 kb on - strand at 4217.874 kb on + strand at 4217.878 kb on - strand at 4217.878 kb on - strand at 4217.914 kb on + strand at 4217.916 kb on + strand at 4217.930 kb on + strand at 4217.930 kb on + strand at 4217.933 kb on + strand at 4217.934 kb on - strand at 4218.083 kb on + strand at 4218.084 kb on - strand at 4218.087 kb on + strand at 4218.087 kb on + strand at 4218.088 kb on - strand at 4218.088 kb on - strand at 4218.119 kb on + strand at 4218.143 kb on + strand at 4218.144 kb on - strand at 4218.144 kb on - strand at 4218.184 kb on - strand at 4218.184 kb on - strand at 4218.186 kb on - strand at 4218.191 kb on + strand at 4218.192 kb on - strand at 4218.208 kb on - strand at 4218.252 kb on + strand at 4218.340 kb on + strand, within Echvi_3558 at 4218.341 kb on - strand, within Echvi_3558 at 4218.470 kb on - strand, within Echvi_3558 at 4218.470 kb on - strand, within Echvi_3558 at 4218.616 kb on + strand, within Echvi_3558 at 4218.617 kb on - strand, within Echvi_3558 at 4218.647 kb on - strand, within Echvi_3558 at 4218.647 kb on - strand, within Echvi_3558 at 4218.647 kb on - strand, within Echvi_3558 at 4218.711 kb on + strand, within Echvi_3558 at 4218.711 kb on + strand, within Echvi_3558 at 4218.712 kb on - strand, within Echvi_3558 at 4218.712 kb on - strand, within Echvi_3558 at 4218.795 kb on + strand, within Echvi_3558 at 4218.795 kb on + strand, within Echvi_3558 at 4218.796 kb on - strand, within Echvi_3558
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 4,216,471 - Echvi_3556 0.18 -0.0 4,216,510 + Echvi_3556 0.22 -0.4 4,216,511 - Echvi_3556 0.22 +1.0 4,216,551 + Echvi_3556 0.25 -0.5 4,216,598 - Echvi_3556 0.29 -0.1 4,216,598 - Echvi_3556 0.29 -0.6 4,216,598 - Echvi_3556 0.29 +1.3 4,216,598 - Echvi_3556 0.29 -0.9 4,216,664 - Echvi_3556 0.35 +0.4 4,216,664 - Echvi_3556 0.35 -0.2 4,216,664 - Echvi_3556 0.35 +1.8 4,216,699 - Echvi_3556 0.38 +1.1 4,216,714 + Echvi_3556 0.39 -0.2 4,216,714 + Echvi_3556 0.39 +0.5 4,216,715 - Echvi_3556 0.39 -0.1 4,216,715 - Echvi_3556 0.39 +0.6 4,216,746 + Echvi_3556 0.42 +0.2 4,216,747 - Echvi_3556 0.42 +0.6 4,216,772 + Echvi_3556 0.44 -0.0 4,216,792 - Echvi_3556 0.45 -2.5 4,216,823 - Echvi_3556 0.48 +0.7 4,216,843 + Echvi_3556 0.50 +0.4 4,216,843 + Echvi_3556 0.50 +0.2 4,216,843 + Echvi_3556 0.50 +0.0 4,216,844 - Echvi_3556 0.50 +0.9 4,216,884 - Echvi_3556 0.53 +0.4 4,216,884 - Echvi_3556 0.53 +0.6 4,216,885 + Echvi_3556 0.53 -0.3 4,216,886 - Echvi_3556 0.53 -0.0 4,216,894 - Echvi_3556 0.54 +1.1 4,216,939 + Echvi_3556 0.58 -0.2 4,216,940 - Echvi_3556 0.58 -0.4 4,217,015 + Echvi_3556 0.64 +0.4 4,217,015 + Echvi_3556 0.64 +0.0 4,217,015 + Echvi_3556 0.64 -0.6 4,217,104 + Echvi_3556 0.72 -0.8 4,217,105 - Echvi_3556 0.72 -0.9 4,217,105 - Echvi_3556 0.72 -0.2 4,217,105 - Echvi_3556 0.72 -0.8 4,217,105 - Echvi_3556 0.72 +0.8 4,217,125 - Echvi_3556 0.74 +0.2 4,217,136 - Echvi_3556 0.74 -0.3 4,217,170 + Echvi_3556 0.77 +0.6 4,217,278 - Echvi_3556 0.86 +0.4 4,217,296 + Echvi_3556 0.88 -1.0 4,217,297 - Echvi_3556 0.88 +0.0 4,217,308 + Echvi_3556 0.89 -1.4 4,217,385 + -0.0 4,217,428 - +0.4 4,217,450 - -2.8 4,217,469 + -0.1 4,217,546 + Echvi_3557 0.22 -0.9 4,217,546 + Echvi_3557 0.22 -0.5 4,217,649 + Echvi_3557 0.45 -2.0 4,217,728 + Echvi_3557 0.63 -0.3 4,217,853 - -2.1 4,217,865 + +0.4 4,217,866 - -0.7 4,217,874 + +1.2 4,217,878 - -0.0 4,217,878 - -0.2 4,217,914 + -0.1 4,217,916 + +1.2 4,217,930 + -0.7 4,217,930 + +1.5 4,217,933 + +0.9 4,217,934 - -1.0 4,218,083 + +0.3 4,218,084 - +0.1 4,218,087 + -0.4 4,218,087 + +0.4 4,218,088 - -0.7 4,218,088 - +0.1 4,218,119 + +0.5 4,218,143 + -0.7 4,218,144 - -0.0 4,218,144 - +0.4 4,218,184 - +0.0 4,218,184 - -0.2 4,218,186 - +0.1 4,218,191 + -0.8 4,218,192 - -0.1 4,218,208 - -1.6 4,218,252 + +1.9 4,218,340 + Echvi_3558 0.16 -1.4 4,218,341 - Echvi_3558 0.16 +0.1 4,218,470 - Echvi_3558 0.26 +0.2 4,218,470 - Echvi_3558 0.26 -0.9 4,218,616 + Echvi_3558 0.37 +0.7 4,218,617 - Echvi_3558 0.37 -0.4 4,218,647 - Echvi_3558 0.40 -1.9 4,218,647 - Echvi_3558 0.40 -0.1 4,218,647 - Echvi_3558 0.40 +0.0 4,218,711 + Echvi_3558 0.45 +0.2 4,218,711 + Echvi_3558 0.45 +0.5 4,218,712 - Echvi_3558 0.45 +0.2 4,218,712 - Echvi_3558 0.45 -0.5 4,218,795 + Echvi_3558 0.51 -0.4 4,218,795 + Echvi_3558 0.51 +0.7 4,218,796 - Echvi_3558 0.51 -0.1
Or see this region's nucleotide sequence