Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3479 and Echvi_3480 are separated by 52 nucleotides Echvi_3480 and Echvi_3481 are separated by 60 nucleotides Echvi_3481 and Echvi_3482 are separated by 7 nucleotides
Echvi_3479: Echvi_3479 - Biopolymer transport proteins, at 4,120,395 to 4,121,090
_3479
Echvi_3480: Echvi_3480 - Biopolymer transport protein, at 4,121,143 to 4,121,535
_3480
Echvi_3481: Echvi_3481 - hypothetical protein, at 4,121,596 to 4,122,546
_3481
Echvi_3482: Echvi_3482 - folylpolyglutamate synthase/dihydrofolate synthase, at 4,122,554 to 4,123,846
_3482
Position (kb) 4121
4122
4123 Strain fitness (log2 ratio) -2
-1
0
1 at 4120.648 kb on + strand, within Echvi_3479 at 4120.648 kb on + strand, within Echvi_3479 at 4120.649 kb on - strand, within Echvi_3479 at 4120.744 kb on + strand, within Echvi_3479 at 4120.745 kb on - strand, within Echvi_3479 at 4120.745 kb on - strand, within Echvi_3479 at 4120.782 kb on + strand, within Echvi_3479 at 4120.782 kb on + strand, within Echvi_3479 at 4120.938 kb on + strand, within Echvi_3479 at 4120.953 kb on - strand, within Echvi_3479 at 4121.004 kb on + strand, within Echvi_3479 at 4121.047 kb on - strand at 4121.048 kb on + strand at 4121.048 kb on + strand at 4121.115 kb on - strand at 4121.169 kb on - strand at 4121.250 kb on + strand, within Echvi_3480 at 4121.304 kb on - strand, within Echvi_3480 at 4121.304 kb on - strand, within Echvi_3480 at 4121.402 kb on + strand, within Echvi_3480 at 4121.412 kb on + strand, within Echvi_3480 at 4121.462 kb on - strand, within Echvi_3480 at 4121.483 kb on + strand, within Echvi_3480 at 4121.527 kb on + strand at 4121.527 kb on + strand at 4121.528 kb on - strand at 4121.529 kb on + strand at 4121.529 kb on + strand at 4121.529 kb on + strand at 4121.529 kb on + strand at 4121.529 kb on + strand at 4121.529 kb on + strand at 4121.529 kb on + strand at 4121.530 kb on - strand at 4121.530 kb on - strand at 4121.530 kb on - strand at 4121.533 kb on + strand at 4121.577 kb on + strand at 4121.579 kb on + strand at 4121.592 kb on - strand at 4121.613 kb on + strand at 4121.613 kb on + strand at 4121.675 kb on + strand at 4121.988 kb on + strand, within Echvi_3481 at 4122.279 kb on + strand, within Echvi_3481 at 4122.312 kb on + strand, within Echvi_3481 at 4122.363 kb on + strand, within Echvi_3481 at 4122.415 kb on + strand, within Echvi_3481 at 4122.417 kb on + strand, within Echvi_3481 at 4122.417 kb on + strand, within Echvi_3481 at 4122.418 kb on - strand at 4122.442 kb on + strand, within Echvi_3481 at 4122.456 kb on - strand at 4122.528 kb on + strand at 4122.539 kb on + strand at 4122.539 kb on + strand at 4122.540 kb on - strand at 4122.560 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 4,120,648 + Echvi_3479 0.36 +1.0 4,120,648 + Echvi_3479 0.36 -0.6 4,120,649 - Echvi_3479 0.36 -0.8 4,120,744 + Echvi_3479 0.50 -0.2 4,120,745 - Echvi_3479 0.50 -1.1 4,120,745 - Echvi_3479 0.50 -0.4 4,120,782 + Echvi_3479 0.56 -1.1 4,120,782 + Echvi_3479 0.56 -1.0 4,120,938 + Echvi_3479 0.78 -0.9 4,120,953 - Echvi_3479 0.80 -0.3 4,121,004 + Echvi_3479 0.88 -0.5 4,121,047 - -0.3 4,121,048 + -1.4 4,121,048 + +0.2 4,121,115 - -0.8 4,121,169 - +0.2 4,121,250 + Echvi_3480 0.27 -0.3 4,121,304 - Echvi_3480 0.41 -0.0 4,121,304 - Echvi_3480 0.41 -0.9 4,121,402 + Echvi_3480 0.66 -1.2 4,121,412 + Echvi_3480 0.68 -1.7 4,121,462 - Echvi_3480 0.81 -0.8 4,121,483 + Echvi_3480 0.87 +0.1 4,121,527 + +0.3 4,121,527 + +0.5 4,121,528 - -0.4 4,121,529 + -0.1 4,121,529 + -0.6 4,121,529 + -0.8 4,121,529 + -0.1 4,121,529 + +0.2 4,121,529 + -2.0 4,121,529 + +0.6 4,121,530 - -0.5 4,121,530 - +0.0 4,121,530 - -1.8 4,121,533 + -0.1 4,121,577 + +0.3 4,121,579 + -0.1 4,121,592 - -1.5 4,121,613 + -0.8 4,121,613 + -2.3 4,121,675 + +0.4 4,121,988 + Echvi_3481 0.41 -0.6 4,122,279 + Echvi_3481 0.72 -0.8 4,122,312 + Echvi_3481 0.75 -1.6 4,122,363 + Echvi_3481 0.81 -0.1 4,122,415 + Echvi_3481 0.86 -1.0 4,122,417 + Echvi_3481 0.86 -0.7 4,122,417 + Echvi_3481 0.86 -1.3 4,122,418 - +0.9 4,122,442 + Echvi_3481 0.89 -0.2 4,122,456 - -0.7 4,122,528 + -1.0 4,122,539 + -0.1 4,122,539 + -0.1 4,122,540 - -0.2 4,122,560 + +0.9
Or see this region's nucleotide sequence