Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3146 and Echvi_3147 are separated by 196 nucleotides Echvi_3147 and Echvi_3148 are separated by 69 nucleotides Echvi_3148 and Echvi_3149 are separated by 165 nucleotides
Echvi_3146: Echvi_3146 - hypothetical protein, at 3,756,724 to 3,757,611
_3146
Echvi_3147: Echvi_3147 - AraC-type DNA-binding domain-containing proteins, at 3,757,808 to 3,758,389
_3147
Echvi_3148: Echvi_3148 - KWG Leptospira., at 3,758,459 to 3,759,058
_3148
Echvi_3149: Echvi_3149 - hypothetical protein, at 3,759,224 to 3,759,703
_3149
Position (kb)
3757
3758
3759 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3757.673 kb on - strand at 3757.673 kb on - strand at 3757.679 kb on - strand at 3757.681 kb on - strand at 3757.742 kb on - strand at 3757.753 kb on + strand at 3757.795 kb on + strand at 3757.796 kb on - strand at 3757.796 kb on - strand at 3757.802 kb on + strand at 3757.802 kb on + strand at 3757.803 kb on - strand at 3757.803 kb on - strand at 3757.803 kb on - strand at 3757.803 kb on - strand at 3757.803 kb on - strand at 3757.803 kb on - strand at 3757.805 kb on - strand at 3757.805 kb on - strand at 3757.805 kb on - strand at 3757.805 kb on - strand at 3757.807 kb on + strand at 3757.808 kb on - strand at 3757.866 kb on + strand at 3757.870 kb on + strand, within Echvi_3147 at 3757.881 kb on + strand, within Echvi_3147 at 3757.983 kb on + strand, within Echvi_3147 at 3758.086 kb on + strand, within Echvi_3147 at 3758.086 kb on + strand, within Echvi_3147 at 3758.086 kb on + strand, within Echvi_3147 at 3758.087 kb on - strand, within Echvi_3147 at 3758.087 kb on - strand, within Echvi_3147 at 3758.087 kb on - strand, within Echvi_3147 at 3758.087 kb on - strand, within Echvi_3147 at 3758.087 kb on - strand, within Echvi_3147 at 3758.087 kb on - strand, within Echvi_3147 at 3758.090 kb on - strand, within Echvi_3147 at 3758.090 kb on - strand, within Echvi_3147 at 3758.090 kb on - strand, within Echvi_3147 at 3758.095 kb on - strand, within Echvi_3147 at 3758.110 kb on - strand, within Echvi_3147 at 3758.136 kb on - strand, within Echvi_3147 at 3758.257 kb on + strand, within Echvi_3147 at 3758.287 kb on - strand, within Echvi_3147 at 3758.324 kb on - strand, within Echvi_3147 at 3758.330 kb on - strand, within Echvi_3147 at 3758.383 kb on + strand at 3758.388 kb on - strand at 3758.516 kb on - strand at 3758.531 kb on + strand, within Echvi_3148 at 3758.531 kb on + strand, within Echvi_3148 at 3758.533 kb on + strand, within Echvi_3148 at 3758.533 kb on + strand, within Echvi_3148 at 3758.611 kb on - strand, within Echvi_3148 at 3758.635 kb on - strand, within Echvi_3148 at 3758.664 kb on - strand, within Echvi_3148 at 3758.692 kb on - strand, within Echvi_3148 at 3758.721 kb on - strand, within Echvi_3148 at 3758.729 kb on + strand, within Echvi_3148 at 3758.730 kb on - strand, within Echvi_3148 at 3758.837 kb on + strand, within Echvi_3148 at 3758.838 kb on - strand, within Echvi_3148 at 3758.840 kb on - strand, within Echvi_3148 at 3758.866 kb on - strand, within Echvi_3148 at 3758.871 kb on - strand, within Echvi_3148 at 3758.871 kb on - strand, within Echvi_3148 at 3758.871 kb on - strand, within Echvi_3148 at 3758.891 kb on - strand, within Echvi_3148 at 3758.893 kb on - strand, within Echvi_3148 at 3758.893 kb on - strand, within Echvi_3148 at 3758.909 kb on - strand, within Echvi_3148 at 3758.957 kb on - strand, within Echvi_3148 at 3759.077 kb on + strand at 3759.130 kb on + strand at 3759.366 kb on - strand, within Echvi_3149 at 3759.366 kb on - strand, within Echvi_3149 at 3759.366 kb on - strand, within Echvi_3149 at 3759.367 kb on + strand at 3759.367 kb on + strand, within Echvi_3149 at 3759.367 kb on + strand, within Echvi_3149 at 3759.368 kb on - strand, within Echvi_3149 at 3759.368 kb on - strand, within Echvi_3149 at 3759.368 kb on - strand, within Echvi_3149 at 3759.388 kb on + strand, within Echvi_3149 at 3759.389 kb on - strand, within Echvi_3149 at 3759.389 kb on - strand, within Echvi_3149 at 3759.389 kb on - strand, within Echvi_3149
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 3,757,673 - -2.2 3,757,673 - +0.9 3,757,679 - -0.8 3,757,681 - +0.5 3,757,742 - -0.2 3,757,753 + +0.1 3,757,795 + +0.9 3,757,796 - +0.2 3,757,796 - +0.9 3,757,802 + -0.1 3,757,802 + -0.9 3,757,803 - -0.0 3,757,803 - +0.6 3,757,803 - -0.1 3,757,803 - +0.9 3,757,803 - -0.3 3,757,803 - +0.2 3,757,805 - +0.5 3,757,805 - -0.8 3,757,805 - +1.5 3,757,805 - -0.1 3,757,807 + -2.4 3,757,808 - +0.9 3,757,866 + +1.1 3,757,870 + Echvi_3147 0.11 +0.2 3,757,881 + Echvi_3147 0.13 -0.1 3,757,983 + Echvi_3147 0.30 -0.7 3,758,086 + Echvi_3147 0.48 -1.2 3,758,086 + Echvi_3147 0.48 -1.4 3,758,086 + Echvi_3147 0.48 -1.7 3,758,087 - Echvi_3147 0.48 -0.2 3,758,087 - Echvi_3147 0.48 -0.7 3,758,087 - Echvi_3147 0.48 -0.3 3,758,087 - Echvi_3147 0.48 -0.1 3,758,087 - Echvi_3147 0.48 -0.7 3,758,087 - Echvi_3147 0.48 -0.8 3,758,090 - Echvi_3147 0.48 -0.5 3,758,090 - Echvi_3147 0.48 +0.5 3,758,090 - Echvi_3147 0.48 +1.7 3,758,095 - Echvi_3147 0.49 -0.4 3,758,110 - Echvi_3147 0.52 -0.0 3,758,136 - Echvi_3147 0.56 +0.0 3,758,257 + Echvi_3147 0.77 -1.1 3,758,287 - Echvi_3147 0.82 -1.2 3,758,324 - Echvi_3147 0.89 -2.1 3,758,330 - Echvi_3147 0.90 -1.3 3,758,383 + -0.4 3,758,388 - -2.1 3,758,516 - -1.9 3,758,531 + Echvi_3148 0.12 -2.5 3,758,531 + Echvi_3148 0.12 -0.2 3,758,533 + Echvi_3148 0.12 -0.3 3,758,533 + Echvi_3148 0.12 +1.9 3,758,611 - Echvi_3148 0.25 -1.2 3,758,635 - Echvi_3148 0.29 +0.3 3,758,664 - Echvi_3148 0.34 -0.0 3,758,692 - Echvi_3148 0.39 -0.5 3,758,721 - Echvi_3148 0.44 -0.6 3,758,729 + Echvi_3148 0.45 -0.4 3,758,730 - Echvi_3148 0.45 +0.6 3,758,837 + Echvi_3148 0.63 +0.8 3,758,838 - Echvi_3148 0.63 -1.0 3,758,840 - Echvi_3148 0.64 -0.1 3,758,866 - Echvi_3148 0.68 +0.7 3,758,871 - Echvi_3148 0.69 -0.6 3,758,871 - Echvi_3148 0.69 -0.5 3,758,871 - Echvi_3148 0.69 -0.1 3,758,891 - Echvi_3148 0.72 -1.7 3,758,893 - Echvi_3148 0.72 -0.3 3,758,893 - Echvi_3148 0.72 +0.2 3,758,909 - Echvi_3148 0.75 -0.3 3,758,957 - Echvi_3148 0.83 -0.2 3,759,077 + -1.6 3,759,130 + -1.4 3,759,366 - Echvi_3149 0.30 +0.6 3,759,366 - Echvi_3149 0.30 +0.4 3,759,366 - Echvi_3149 0.30 -0.3 3,759,367 + +0.2 3,759,367 + Echvi_3149 0.30 -1.1 3,759,367 + Echvi_3149 0.30 +0.1 3,759,368 - Echvi_3149 0.30 -0.5 3,759,368 - Echvi_3149 0.30 -0.3 3,759,368 - Echvi_3149 0.30 +1.4 3,759,388 + Echvi_3149 0.34 +0.2 3,759,389 - Echvi_3149 0.34 -0.6 3,759,389 - Echvi_3149 0.34 -0.4 3,759,389 - Echvi_3149 0.34 +0.5
Or see this region's nucleotide sequence