Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3129 and Echvi_3130 are separated by 399 nucleotides Echvi_3130 and Echvi_3131 are separated by 191 nucleotides Echvi_3131 and Echvi_3132 are separated by 175 nucleotides Echvi_3132 and Echvi_3133 are separated by 160 nucleotides
Echvi_3129: Echvi_3129 - hypothetical protein, at 3,742,649 to 3,742,801
_3129
Echvi_3130: Echvi_3130 - tRNA, at 3,743,201 to 3,743,285
_3130
Echvi_3131: Echvi_3131 - Arginase/agmatinase/formimionoglutamate hydrolase, arginase family, at 3,743,477 to 3,744,547
_3131
Echvi_3132: Echvi_3132 - Phosphohistidine phosphatase SixA, at 3,744,723 to 3,745,202
_3132
Echvi_3133: Echvi_3133 - DNA topoisomerase I, bacterial, at 3,745,363 to 3,747,684
_3133
Position (kb)
3743
3744
3745 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3742.517 kb on - strand at 3742.523 kb on + strand at 3742.523 kb on + strand at 3742.524 kb on - strand at 3742.526 kb on - strand at 3742.587 kb on + strand at 3742.699 kb on + strand, within Echvi_3129 at 3742.719 kb on + strand, within Echvi_3129 at 3742.773 kb on + strand, within Echvi_3129 at 3742.773 kb on + strand, within Echvi_3129 at 3742.773 kb on + strand, within Echvi_3129 at 3742.773 kb on + strand, within Echvi_3129 at 3742.773 kb on + strand, within Echvi_3129 at 3742.774 kb on - strand, within Echvi_3129 at 3742.774 kb on - strand, within Echvi_3129 at 3742.775 kb on + strand, within Echvi_3129 at 3742.861 kb on + strand at 3742.863 kb on + strand at 3742.863 kb on + strand at 3742.863 kb on + strand at 3742.863 kb on + strand at 3742.863 kb on + strand at 3742.863 kb on + strand at 3742.863 kb on + strand at 3742.864 kb on - strand at 3742.864 kb on - strand at 3742.864 kb on - strand at 3742.924 kb on - strand at 3742.929 kb on + strand at 3742.930 kb on - strand at 3742.930 kb on - strand at 3742.975 kb on - strand at 3743.104 kb on + strand at 3743.105 kb on - strand at 3743.111 kb on - strand at 3743.111 kb on - strand at 3743.146 kb on + strand at 3743.147 kb on - strand at 3743.155 kb on - strand at 3743.155 kb on - strand at 3743.157 kb on + strand at 3743.339 kb on + strand at 3743.340 kb on - strand at 3743.376 kb on + strand at 3743.377 kb on - strand at 3743.435 kb on - strand at 3743.453 kb on - strand at 3743.490 kb on - strand at 3743.527 kb on + strand at 3743.528 kb on - strand at 3743.534 kb on + strand at 3743.566 kb on + strand at 3743.586 kb on - strand, within Echvi_3131 at 3743.692 kb on + strand, within Echvi_3131 at 3743.735 kb on - strand, within Echvi_3131 at 3743.735 kb on - strand, within Echvi_3131 at 3743.765 kb on + strand, within Echvi_3131 at 3743.802 kb on + strand, within Echvi_3131 at 3743.802 kb on + strand, within Echvi_3131 at 3743.819 kb on - strand, within Echvi_3131 at 3743.845 kb on + strand, within Echvi_3131 at 3744.005 kb on + strand, within Echvi_3131 at 3744.015 kb on - strand, within Echvi_3131 at 3744.052 kb on + strand, within Echvi_3131 at 3744.070 kb on + strand, within Echvi_3131 at 3744.071 kb on - strand, within Echvi_3131 at 3744.071 kb on - strand, within Echvi_3131 at 3744.132 kb on + strand, within Echvi_3131 at 3744.237 kb on + strand, within Echvi_3131 at 3744.271 kb on + strand, within Echvi_3131 at 3744.276 kb on + strand, within Echvi_3131 at 3744.277 kb on - strand, within Echvi_3131 at 3744.301 kb on + strand, within Echvi_3131 at 3744.564 kb on + strand at 3744.615 kb on - strand at 3744.616 kb on + strand at 3744.617 kb on - strand at 3744.663 kb on - strand at 3744.732 kb on + strand at 3744.732 kb on + strand at 3744.758 kb on + strand at 3744.827 kb on + strand, within Echvi_3132 at 3744.827 kb on + strand, within Echvi_3132 at 3744.828 kb on - strand, within Echvi_3132 at 3744.847 kb on + strand, within Echvi_3132 at 3744.848 kb on - strand, within Echvi_3132 at 3744.888 kb on + strand, within Echvi_3132 at 3744.888 kb on + strand, within Echvi_3132 at 3744.889 kb on - strand, within Echvi_3132 at 3744.889 kb on - strand, within Echvi_3132 at 3744.896 kb on + strand, within Echvi_3132 at 3744.896 kb on + strand, within Echvi_3132 at 3744.897 kb on - strand, within Echvi_3132 at 3744.897 kb on - strand, within Echvi_3132 at 3744.897 kb on - strand, within Echvi_3132 at 3745.063 kb on - strand, within Echvi_3132 at 3745.189 kb on - strand at 3745.192 kb on - strand at 3745.192 kb on - strand at 3745.215 kb on - strand at 3745.248 kb on + strand at 3745.297 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 3,742,517 - -0.2 3,742,523 + -1.2 3,742,523 + -0.5 3,742,524 - +0.5 3,742,526 - +1.2 3,742,587 + -1.0 3,742,699 + Echvi_3129 0.33 +0.7 3,742,719 + Echvi_3129 0.46 -1.7 3,742,773 + Echvi_3129 0.81 -0.4 3,742,773 + Echvi_3129 0.81 +0.7 3,742,773 + Echvi_3129 0.81 +0.5 3,742,773 + Echvi_3129 0.81 -0.4 3,742,773 + Echvi_3129 0.81 +0.0 3,742,774 - Echvi_3129 0.82 +0.6 3,742,774 - Echvi_3129 0.82 -0.8 3,742,775 + Echvi_3129 0.82 +2.1 3,742,861 + +0.5 3,742,863 + +0.2 3,742,863 + -0.6 3,742,863 + -0.2 3,742,863 + +0.2 3,742,863 + -1.0 3,742,863 + -0.4 3,742,863 + -1.2 3,742,864 - +0.8 3,742,864 - +0.3 3,742,864 - -1.7 3,742,924 - +0.1 3,742,929 + -0.4 3,742,930 - +0.2 3,742,930 - +0.1 3,742,975 - +1.7 3,743,104 + +0.8 3,743,105 - +0.6 3,743,111 - -0.6 3,743,111 - -1.9 3,743,146 + -0.6 3,743,147 - +1.4 3,743,155 - -0.1 3,743,155 - -0.5 3,743,157 + -2.4 3,743,339 + +0.1 3,743,340 - +0.7 3,743,376 + -1.2 3,743,377 - +0.5 3,743,435 - -1.0 3,743,453 - +0.4 3,743,490 - -2.0 3,743,527 + -1.4 3,743,528 - -2.3 3,743,534 + +0.1 3,743,566 + -0.3 3,743,586 - Echvi_3131 0.10 -0.3 3,743,692 + Echvi_3131 0.20 -1.2 3,743,735 - Echvi_3131 0.24 -1.6 3,743,735 - Echvi_3131 0.24 -0.3 3,743,765 + Echvi_3131 0.27 -1.1 3,743,802 + Echvi_3131 0.30 +1.2 3,743,802 + Echvi_3131 0.30 -3.3 3,743,819 - Echvi_3131 0.32 -2.4 3,743,845 + Echvi_3131 0.34 -0.6 3,744,005 + Echvi_3131 0.49 -0.7 3,744,015 - Echvi_3131 0.50 -0.8 3,744,052 + Echvi_3131 0.54 -1.5 3,744,070 + Echvi_3131 0.55 -3.1 3,744,071 - Echvi_3131 0.55 -0.5 3,744,071 - Echvi_3131 0.55 +0.2 3,744,132 + Echvi_3131 0.61 +1.1 3,744,237 + Echvi_3131 0.71 -0.7 3,744,271 + Echvi_3131 0.74 -1.8 3,744,276 + Echvi_3131 0.75 +0.5 3,744,277 - Echvi_3131 0.75 +0.1 3,744,301 + Echvi_3131 0.77 -0.4 3,744,564 + -0.2 3,744,615 - +0.4 3,744,616 + +0.8 3,744,617 - +0.5 3,744,663 - -1.1 3,744,732 + -0.9 3,744,732 + +2.1 3,744,758 + -0.9 3,744,827 + Echvi_3132 0.22 -0.9 3,744,827 + Echvi_3132 0.22 +0.1 3,744,828 - Echvi_3132 0.22 -0.9 3,744,847 + Echvi_3132 0.26 +0.0 3,744,848 - Echvi_3132 0.26 -1.6 3,744,888 + Echvi_3132 0.34 +1.9 3,744,888 + Echvi_3132 0.34 -0.9 3,744,889 - Echvi_3132 0.35 -1.1 3,744,889 - Echvi_3132 0.35 +0.1 3,744,896 + Echvi_3132 0.36 -0.1 3,744,896 + Echvi_3132 0.36 +0.1 3,744,897 - Echvi_3132 0.36 +0.5 3,744,897 - Echvi_3132 0.36 -1.8 3,744,897 - Echvi_3132 0.36 -0.1 3,745,063 - Echvi_3132 0.71 +0.6 3,745,189 - -1.2 3,745,192 - +0.2 3,745,192 - +0.3 3,745,215 - -1.2 3,745,248 + -0.4 3,745,297 + +0.2
Or see this region's nucleotide sequence