Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3092 and Echvi_3093 are separated by 122 nucleotides Echvi_3093 and Echvi_3094 overlap by 4 nucleotides Echvi_3094 and Echvi_3095 are separated by 160 nucleotides
Echvi_3092: Echvi_3092 - Predicted dehydrogenases and related proteins, at 3,693,801 to 3,694,811
_3092
Echvi_3093: Echvi_3093 - hypothetical protein, at 3,694,934 to 3,695,632
_3093
Echvi_3094: Echvi_3094 - Protein of unknown function (DUF3307)., at 3,695,629 to 3,696,333
_3094
Echvi_3095: Echvi_3095 - Arylsulfatase A and related enzymes, at 3,696,494 to 3,698,104
_3095
Position (kb)
3694
3695
3696 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3694.001 kb on - strand, within Echvi_3092 at 3694.026 kb on + strand, within Echvi_3092 at 3694.026 kb on + strand, within Echvi_3092 at 3694.027 kb on - strand, within Echvi_3092 at 3694.027 kb on - strand, within Echvi_3092 at 3694.027 kb on - strand, within Echvi_3092 at 3694.060 kb on - strand, within Echvi_3092 at 3694.062 kb on - strand, within Echvi_3092 at 3694.067 kb on - strand, within Echvi_3092 at 3694.095 kb on + strand, within Echvi_3092 at 3694.122 kb on + strand, within Echvi_3092 at 3694.177 kb on - strand, within Echvi_3092 at 3694.202 kb on - strand, within Echvi_3092 at 3694.269 kb on - strand, within Echvi_3092 at 3694.455 kb on + strand, within Echvi_3092 at 3694.456 kb on - strand, within Echvi_3092 at 3694.456 kb on - strand, within Echvi_3092 at 3694.456 kb on - strand, within Echvi_3092 at 3694.474 kb on + strand, within Echvi_3092 at 3694.475 kb on - strand, within Echvi_3092 at 3694.475 kb on - strand, within Echvi_3092 at 3694.475 kb on - strand, within Echvi_3092 at 3694.477 kb on + strand, within Echvi_3092 at 3694.478 kb on - strand, within Echvi_3092 at 3694.560 kb on - strand, within Echvi_3092 at 3694.570 kb on - strand, within Echvi_3092 at 3694.570 kb on - strand, within Echvi_3092 at 3694.594 kb on - strand, within Echvi_3092 at 3694.718 kb on - strand at 3694.748 kb on - strand at 3694.772 kb on - strand at 3694.772 kb on - strand at 3694.891 kb on + strand at 3694.895 kb on + strand at 3694.895 kb on + strand at 3694.898 kb on + strand at 3694.898 kb on + strand at 3694.905 kb on + strand at 3694.911 kb on + strand at 3694.922 kb on + strand at 3694.931 kb on + strand at 3694.931 kb on + strand at 3695.061 kb on - strand, within Echvi_3093 at 3695.085 kb on - strand, within Echvi_3093 at 3695.085 kb on - strand, within Echvi_3093 at 3695.204 kb on - strand, within Echvi_3093 at 3695.258 kb on - strand, within Echvi_3093 at 3695.609 kb on - strand at 3695.671 kb on - strand at 3695.748 kb on - strand, within Echvi_3094 at 3695.758 kb on - strand, within Echvi_3094 at 3695.759 kb on + strand, within Echvi_3094 at 3695.804 kb on - strand, within Echvi_3094 at 3695.810 kb on + strand, within Echvi_3094 at 3695.810 kb on + strand, within Echvi_3094 at 3695.812 kb on + strand, within Echvi_3094 at 3695.812 kb on + strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.842 kb on + strand, within Echvi_3094 at 3695.842 kb on + strand, within Echvi_3094 at 3695.842 kb on + strand, within Echvi_3094 at 3695.843 kb on - strand, within Echvi_3094 at 3695.843 kb on - strand, within Echvi_3094 at 3695.871 kb on - strand, within Echvi_3094 at 3695.871 kb on - strand, within Echvi_3094 at 3695.939 kb on + strand, within Echvi_3094 at 3695.939 kb on + strand, within Echvi_3094 at 3695.940 kb on - strand, within Echvi_3094 at 3695.965 kb on + strand, within Echvi_3094 at 3696.032 kb on - strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.038 kb on + strand, within Echvi_3094 at 3696.038 kb on + strand, within Echvi_3094 at 3696.038 kb on + strand, within Echvi_3094 at 3696.227 kb on + strand, within Echvi_3094 at 3696.276 kb on + strand at 3696.277 kb on - strand at 3696.285 kb on + strand at 3696.285 kb on + strand at 3696.321 kb on - strand at 3696.321 kb on - strand at 3696.330 kb on - strand at 3696.357 kb on - strand at 3696.357 kb on - strand at 3696.357 kb on - strand at 3696.409 kb on + strand at 3696.410 kb on - strand at 3696.437 kb on - strand at 3696.437 kb on - strand at 3696.438 kb on + strand at 3696.441 kb on + strand at 3696.479 kb on + strand at 3696.480 kb on - strand at 3696.488 kb on + strand at 3696.488 kb on + strand at 3696.489 kb on - strand at 3696.498 kb on - strand at 3696.498 kb on - strand at 3696.549 kb on + strand at 3696.581 kb on - strand at 3696.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 3,694,001 - Echvi_3092 0.20 +1.1 3,694,026 + Echvi_3092 0.22 -0.5 3,694,026 + Echvi_3092 0.22 +0.6 3,694,027 - Echvi_3092 0.22 -0.1 3,694,027 - Echvi_3092 0.22 +0.8 3,694,027 - Echvi_3092 0.22 -1.7 3,694,060 - Echvi_3092 0.26 +0.5 3,694,062 - Echvi_3092 0.26 +0.5 3,694,067 - Echvi_3092 0.26 +0.4 3,694,095 + Echvi_3092 0.29 +0.9 3,694,122 + Echvi_3092 0.32 +0.0 3,694,177 - Echvi_3092 0.37 -0.0 3,694,202 - Echvi_3092 0.40 -0.6 3,694,269 - Echvi_3092 0.46 +0.5 3,694,455 + Echvi_3092 0.65 -0.5 3,694,456 - Echvi_3092 0.65 +0.5 3,694,456 - Echvi_3092 0.65 -0.1 3,694,456 - Echvi_3092 0.65 -0.2 3,694,474 + Echvi_3092 0.67 -0.2 3,694,475 - Echvi_3092 0.67 +1.5 3,694,475 - Echvi_3092 0.67 +0.2 3,694,475 - Echvi_3092 0.67 +0.4 3,694,477 + Echvi_3092 0.67 +1.5 3,694,478 - Echvi_3092 0.67 -2.0 3,694,560 - Echvi_3092 0.75 -0.1 3,694,570 - Echvi_3092 0.76 -1.0 3,694,570 - Echvi_3092 0.76 -1.2 3,694,594 - Echvi_3092 0.78 -0.3 3,694,718 - -0.2 3,694,748 - +0.3 3,694,772 - -0.8 3,694,772 - -1.5 3,694,891 + -0.5 3,694,895 + -0.8 3,694,895 + +0.4 3,694,898 + +0.1 3,694,898 + -0.3 3,694,905 + +1.4 3,694,911 + -0.1 3,694,922 + +0.1 3,694,931 + -1.1 3,694,931 + +0.1 3,695,061 - Echvi_3093 0.18 -0.0 3,695,085 - Echvi_3093 0.22 -0.3 3,695,085 - Echvi_3093 0.22 -0.4 3,695,204 - Echvi_3093 0.39 -1.0 3,695,258 - Echvi_3093 0.46 -1.2 3,695,609 - -0.7 3,695,671 - +0.4 3,695,748 - Echvi_3094 0.17 +1.4 3,695,758 - Echvi_3094 0.18 +0.1 3,695,759 + Echvi_3094 0.18 +0.4 3,695,804 - Echvi_3094 0.25 +0.1 3,695,810 + Echvi_3094 0.26 +0.3 3,695,810 + Echvi_3094 0.26 -0.5 3,695,812 + Echvi_3094 0.26 +0.2 3,695,812 + Echvi_3094 0.26 -0.3 3,695,813 - Echvi_3094 0.26 +0.3 3,695,813 - Echvi_3094 0.26 -0.3 3,695,813 - Echvi_3094 0.26 +0.3 3,695,813 - Echvi_3094 0.26 +0.0 3,695,842 + Echvi_3094 0.30 +0.6 3,695,842 + Echvi_3094 0.30 +0.1 3,695,842 + Echvi_3094 0.30 -0.7 3,695,843 - Echvi_3094 0.30 +0.8 3,695,843 - Echvi_3094 0.30 -0.4 3,695,871 - Echvi_3094 0.34 +0.4 3,695,871 - Echvi_3094 0.34 +0.3 3,695,939 + Echvi_3094 0.44 -0.0 3,695,939 + Echvi_3094 0.44 -0.2 3,695,940 - Echvi_3094 0.44 +1.5 3,695,965 + Echvi_3094 0.48 -0.8 3,696,032 - Echvi_3094 0.57 +0.5 3,696,033 + Echvi_3094 0.57 -1.1 3,696,033 + Echvi_3094 0.57 +0.8 3,696,033 + Echvi_3094 0.57 -0.2 3,696,033 + Echvi_3094 0.57 +0.4 3,696,034 - Echvi_3094 0.57 +1.8 3,696,034 - Echvi_3094 0.57 +0.6 3,696,034 - Echvi_3094 0.57 -0.5 3,696,034 - Echvi_3094 0.57 -0.5 3,696,034 - Echvi_3094 0.57 -0.9 3,696,038 + Echvi_3094 0.58 +0.0 3,696,038 + Echvi_3094 0.58 +0.5 3,696,038 + Echvi_3094 0.58 +0.5 3,696,227 + Echvi_3094 0.85 +0.5 3,696,276 + +0.7 3,696,277 - +0.9 3,696,285 + -0.9 3,696,285 + -0.1 3,696,321 - +0.3 3,696,321 - -0.7 3,696,330 - +0.7 3,696,357 - -0.8 3,696,357 - -0.3 3,696,357 - +0.8 3,696,409 + +0.6 3,696,410 - +0.8 3,696,437 - -1.1 3,696,437 - -0.3 3,696,438 + -0.5 3,696,441 + +1.3 3,696,479 + +1.3 3,696,480 - -0.4 3,696,488 + -0.1 3,696,488 + -1.5 3,696,489 - +0.0 3,696,498 - -1.9 3,696,498 - +0.8 3,696,549 + +0.0 3,696,581 - -0.9 3,696,626 - +0.1
Or see this region's nucleotide sequence