Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2771 and Echvi_2772 are separated by 678 nucleotides Echvi_2772 and Echvi_2773 are separated by 38 nucleotides Echvi_2773 and Echvi_2774 are separated by 35 nucleotides
Echvi_2771: Echvi_2771 - hypothetical protein, at 3,310,163 to 3,312,646
_2771
Echvi_2772: Echvi_2772 - hypothetical protein, at 3,313,325 to 3,313,780
_2772
Echvi_2773: Echvi_2773 - hypothetical protein, at 3,313,819 to 3,314,208
_2773
Echvi_2774: Echvi_2774 - RNA polymerase sigma factor, sigma-70 family, at 3,314,244 to 3,314,792
_2774
Position (kb)
3313
3314 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3312.436 kb on - strand at 3312.438 kb on + strand at 3312.439 kb on - strand at 3312.603 kb on - strand at 3312.605 kb on + strand at 3312.606 kb on - strand at 3312.662 kb on - strand at 3312.710 kb on + strand at 3312.736 kb on + strand at 3312.736 kb on + strand at 3312.737 kb on - strand at 3312.796 kb on - strand at 3312.796 kb on - strand at 3312.796 kb on - strand at 3312.823 kb on + strand at 3312.837 kb on + strand at 3312.838 kb on - strand at 3312.844 kb on + strand at 3312.862 kb on + strand at 3312.863 kb on - strand at 3312.863 kb on - strand at 3312.863 kb on - strand at 3312.878 kb on + strand at 3312.878 kb on + strand at 3312.878 kb on + strand at 3312.879 kb on - strand at 3312.879 kb on - strand at 3312.879 kb on - strand at 3312.988 kb on + strand at 3313.004 kb on - strand at 3313.013 kb on + strand at 3313.037 kb on + strand at 3313.048 kb on + strand at 3313.049 kb on - strand at 3313.050 kb on + strand at 3313.073 kb on - strand at 3313.076 kb on + strand at 3313.094 kb on + strand at 3313.094 kb on + strand at 3313.094 kb on + strand at 3313.105 kb on - strand at 3313.111 kb on + strand at 3313.111 kb on + strand at 3313.112 kb on - strand at 3313.182 kb on - strand at 3313.203 kb on + strand at 3313.203 kb on + strand at 3313.204 kb on - strand at 3313.227 kb on + strand at 3313.227 kb on + strand at 3313.228 kb on - strand at 3313.229 kb on + strand at 3313.243 kb on - strand at 3313.250 kb on + strand at 3313.251 kb on - strand at 3313.251 kb on - strand at 3313.251 kb on - strand at 3313.262 kb on - strand at 3313.262 kb on - strand at 3313.265 kb on - strand at 3313.267 kb on - strand at 3313.283 kb on - strand at 3313.283 kb on - strand at 3313.289 kb on + strand at 3313.289 kb on + strand at 3313.411 kb on - strand, within Echvi_2772 at 3313.413 kb on - strand, within Echvi_2772 at 3313.444 kb on + strand, within Echvi_2772 at 3313.504 kb on + strand, within Echvi_2772 at 3313.639 kb on + strand, within Echvi_2772 at 3313.640 kb on - strand, within Echvi_2772 at 3313.814 kb on + strand at 3313.820 kb on + strand at 3313.826 kb on + strand at 3313.826 kb on + strand at 3313.826 kb on + strand at 3313.826 kb on + strand at 3313.826 kb on + strand at 3313.887 kb on - strand, within Echvi_2773 at 3314.029 kb on + strand, within Echvi_2773 at 3314.029 kb on + strand, within Echvi_2773 at 3314.030 kb on - strand, within Echvi_2773 at 3314.062 kb on + strand, within Echvi_2773 at 3314.062 kb on + strand, within Echvi_2773 at 3314.134 kb on + strand, within Echvi_2773 at 3314.160 kb on - strand, within Echvi_2773 at 3314.211 kb on + strand at 3314.211 kb on + strand at 3314.211 kb on + strand at 3314.211 kb on + strand at 3314.212 kb on - strand at 3314.212 kb on - strand at 3314.212 kb on - strand at 3314.213 kb on + strand at 3314.214 kb on - strand at 3314.215 kb on + strand at 3314.215 kb on + strand at 3314.291 kb on - strand at 3314.345 kb on - strand, within Echvi_2774 at 3314.369 kb on + strand, within Echvi_2774 at 3314.370 kb on - strand, within Echvi_2774 at 3314.376 kb on + strand, within Echvi_2774 at 3314.379 kb on + strand, within Echvi_2774 at 3314.379 kb on + strand, within Echvi_2774 at 3314.424 kb on + strand, within Echvi_2774 at 3314.451 kb on + strand, within Echvi_2774 at 3314.452 kb on - strand, within Echvi_2774 at 3314.463 kb on + strand, within Echvi_2774 at 3314.463 kb on + strand, within Echvi_2774 at 3314.463 kb on + strand, within Echvi_2774 at 3314.464 kb on - strand, within Echvi_2774 at 3314.467 kb on + strand, within Echvi_2774 at 3314.468 kb on - strand, within Echvi_2774 at 3314.573 kb on + strand, within Echvi_2774 at 3314.577 kb on + strand, within Echvi_2774 at 3314.578 kb on - strand, within Echvi_2774 at 3314.578 kb on - strand, within Echvi_2774 at 3314.600 kb on + strand, within Echvi_2774 at 3314.601 kb on - strand, within Echvi_2774 at 3314.603 kb on + strand, within Echvi_2774 at 3314.664 kb on - strand, within Echvi_2774 at 3314.684 kb on + strand, within Echvi_2774 at 3314.685 kb on - strand, within Echvi_2774 at 3314.687 kb on + strand, within Echvi_2774 at 3314.687 kb on + strand, within Echvi_2774 at 3314.688 kb on - strand, within Echvi_2774 at 3314.688 kb on - strand, within Echvi_2774 at 3314.689 kb on + strand, within Echvi_2774 at 3314.689 kb on + strand, within Echvi_2774
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 3,312,436 - -0.2 3,312,438 + +2.1 3,312,439 - +0.1 3,312,603 - +0.3 3,312,605 + +1.0 3,312,606 - +0.1 3,312,662 - +0.3 3,312,710 + -1.0 3,312,736 + +0.5 3,312,736 + -1.3 3,312,737 - -1.2 3,312,796 - +0.2 3,312,796 - -0.2 3,312,796 - +0.5 3,312,823 + -1.0 3,312,837 + +1.1 3,312,838 - -0.0 3,312,844 + -2.1 3,312,862 + +0.9 3,312,863 - +0.4 3,312,863 - +1.0 3,312,863 - -0.3 3,312,878 + -0.6 3,312,878 + +1.0 3,312,878 + +0.0 3,312,879 - -2.2 3,312,879 - -1.4 3,312,879 - +0.9 3,312,988 + -0.6 3,313,004 - -0.4 3,313,013 + +0.1 3,313,037 + -0.4 3,313,048 + +1.9 3,313,049 - -0.4 3,313,050 + +1.6 3,313,073 - -1.5 3,313,076 + +0.1 3,313,094 + -0.4 3,313,094 + +0.0 3,313,094 + +2.4 3,313,105 - +0.1 3,313,111 + +0.8 3,313,111 + -0.6 3,313,112 - +0.4 3,313,182 - -0.1 3,313,203 + -0.6 3,313,203 + -0.6 3,313,204 - +0.2 3,313,227 + -0.5 3,313,227 + +1.0 3,313,228 - -0.2 3,313,229 + +0.6 3,313,243 - -1.1 3,313,250 + -0.7 3,313,251 - -0.1 3,313,251 - -1.3 3,313,251 - -1.3 3,313,262 - +0.0 3,313,262 - +1.1 3,313,265 - -0.4 3,313,267 - +0.1 3,313,283 - +0.5 3,313,283 - +0.6 3,313,289 + +1.8 3,313,289 + -0.1 3,313,411 - Echvi_2772 0.19 -2.3 3,313,413 - Echvi_2772 0.19 -1.3 3,313,444 + Echvi_2772 0.26 -1.3 3,313,504 + Echvi_2772 0.39 -2.3 3,313,639 + Echvi_2772 0.69 -0.7 3,313,640 - Echvi_2772 0.69 -1.0 3,313,814 + -1.5 3,313,820 + -0.7 3,313,826 + +0.3 3,313,826 + -1.8 3,313,826 + -1.5 3,313,826 + +0.2 3,313,826 + -2.2 3,313,887 - Echvi_2773 0.17 -1.8 3,314,029 + Echvi_2773 0.54 -0.1 3,314,029 + Echvi_2773 0.54 -0.7 3,314,030 - Echvi_2773 0.54 -1.0 3,314,062 + Echvi_2773 0.62 -1.1 3,314,062 + Echvi_2773 0.62 -1.3 3,314,134 + Echvi_2773 0.81 -2.5 3,314,160 - Echvi_2773 0.87 -1.7 3,314,211 + -1.4 3,314,211 + -0.2 3,314,211 + -0.2 3,314,211 + -1.2 3,314,212 - -0.7 3,314,212 - -0.8 3,314,212 - -0.0 3,314,213 + +0.9 3,314,214 - -0.1 3,314,215 + -2.8 3,314,215 + +0.6 3,314,291 - -0.4 3,314,345 - Echvi_2774 0.18 -1.1 3,314,369 + Echvi_2774 0.23 -0.5 3,314,370 - Echvi_2774 0.23 -0.3 3,314,376 + Echvi_2774 0.24 +0.5 3,314,379 + Echvi_2774 0.25 +0.0 3,314,379 + Echvi_2774 0.25 -0.9 3,314,424 + Echvi_2774 0.33 +1.1 3,314,451 + Echvi_2774 0.38 +0.2 3,314,452 - Echvi_2774 0.38 -1.4 3,314,463 + Echvi_2774 0.40 +0.0 3,314,463 + Echvi_2774 0.40 +0.2 3,314,463 + Echvi_2774 0.40 -0.3 3,314,464 - Echvi_2774 0.40 +0.4 3,314,467 + Echvi_2774 0.41 -0.4 3,314,468 - Echvi_2774 0.41 -0.8 3,314,573 + Echvi_2774 0.60 +0.0 3,314,577 + Echvi_2774 0.61 -1.1 3,314,578 - Echvi_2774 0.61 +0.6 3,314,578 - Echvi_2774 0.61 +0.4 3,314,600 + Echvi_2774 0.65 -0.8 3,314,601 - Echvi_2774 0.65 -0.1 3,314,603 + Echvi_2774 0.65 +0.7 3,314,664 - Echvi_2774 0.77 +0.1 3,314,684 + Echvi_2774 0.80 -0.5 3,314,685 - Echvi_2774 0.80 -0.8 3,314,687 + Echvi_2774 0.81 -0.0 3,314,687 + Echvi_2774 0.81 -0.7 3,314,688 - Echvi_2774 0.81 -0.9 3,314,688 - Echvi_2774 0.81 -0.1 3,314,689 + Echvi_2774 0.81 -0.6 3,314,689 + Echvi_2774 0.81 -0.3
Or see this region's nucleotide sequence