Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2283 and Echvi_2284 overlap by 11 nucleotides Echvi_2284 and Echvi_2285 are separated by 197 nucleotides
Echvi_2283: Echvi_2283 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 2,705,439 to 2,706,614
_2283
Echvi_2284: Echvi_2284 - hypothetical protein, at 2,706,604 to 2,706,738
_2284
Echvi_2285: Echvi_2285 - hypothetical protein, at 2,706,936 to 2,707,610
_2285
Position (kb)
2706
2707 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2705.652 kb on - strand, within Echvi_2283 at 2705.764 kb on + strand, within Echvi_2283 at 2705.769 kb on + strand, within Echvi_2283 at 2705.778 kb on + strand, within Echvi_2283 at 2705.779 kb on - strand, within Echvi_2283 at 2705.800 kb on + strand, within Echvi_2283 at 2705.994 kb on - strand, within Echvi_2283 at 2705.995 kb on + strand, within Echvi_2283 at 2705.996 kb on - strand, within Echvi_2283 at 2706.052 kb on + strand, within Echvi_2283 at 2706.052 kb on + strand, within Echvi_2283 at 2706.052 kb on + strand, within Echvi_2283 at 2706.053 kb on - strand, within Echvi_2283 at 2706.230 kb on - strand, within Echvi_2283 at 2706.230 kb on - strand, within Echvi_2283 at 2706.233 kb on + strand, within Echvi_2283 at 2706.234 kb on - strand, within Echvi_2283 at 2706.239 kb on + strand, within Echvi_2283 at 2706.239 kb on + strand, within Echvi_2283 at 2706.240 kb on - strand, within Echvi_2283 at 2706.311 kb on + strand, within Echvi_2283 at 2706.532 kb on + strand at 2706.532 kb on + strand at 2706.533 kb on - strand at 2706.533 kb on - strand at 2706.617 kb on + strand at 2706.617 kb on + strand at 2706.618 kb on - strand, within Echvi_2284 at 2706.621 kb on + strand, within Echvi_2284 at 2706.621 kb on + strand, within Echvi_2284 at 2706.622 kb on - strand, within Echvi_2284 at 2706.622 kb on - strand, within Echvi_2284 at 2706.622 kb on - strand, within Echvi_2284 at 2706.680 kb on + strand, within Echvi_2284 at 2706.746 kb on - strand at 2706.752 kb on + strand at 2706.877 kb on + strand at 2706.906 kb on - strand at 2707.014 kb on + strand, within Echvi_2285 at 2707.070 kb on - strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.104 kb on + strand, within Echvi_2285 at 2707.212 kb on - strand, within Echvi_2285 at 2707.245 kb on + strand, within Echvi_2285 at 2707.333 kb on + strand, within Echvi_2285 at 2707.333 kb on + strand, within Echvi_2285 at 2707.334 kb on - strand, within Echvi_2285 at 2707.334 kb on - strand, within Echvi_2285 at 2707.399 kb on + strand, within Echvi_2285 at 2707.399 kb on + strand, within Echvi_2285 at 2707.425 kb on + strand, within Echvi_2285 at 2707.558 kb on - strand at 2707.560 kb on + strand at 2707.561 kb on - strand at 2707.569 kb on + strand at 2707.613 kb on + strand at 2707.645 kb on + strand at 2707.646 kb on - strand at 2707.646 kb on - strand at 2707.646 kb on - strand at 2707.679 kb on + strand at 2707.683 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 2,705,652 - Echvi_2283 0.18 +0.8 2,705,764 + Echvi_2283 0.28 -1.8 2,705,769 + Echvi_2283 0.28 +0.2 2,705,778 + Echvi_2283 0.29 -0.5 2,705,779 - Echvi_2283 0.29 -0.0 2,705,800 + Echvi_2283 0.31 -0.1 2,705,994 - Echvi_2283 0.47 +2.2 2,705,995 + Echvi_2283 0.47 +0.5 2,705,996 - Echvi_2283 0.47 -0.3 2,706,052 + Echvi_2283 0.52 +0.1 2,706,052 + Echvi_2283 0.52 -0.3 2,706,052 + Echvi_2283 0.52 +0.2 2,706,053 - Echvi_2283 0.52 +1.2 2,706,230 - Echvi_2283 0.67 +2.0 2,706,230 - Echvi_2283 0.67 -0.9 2,706,233 + Echvi_2283 0.68 -0.1 2,706,234 - Echvi_2283 0.68 +0.1 2,706,239 + Echvi_2283 0.68 +0.5 2,706,239 + Echvi_2283 0.68 +0.8 2,706,240 - Echvi_2283 0.68 -0.5 2,706,311 + Echvi_2283 0.74 +1.3 2,706,532 + +0.0 2,706,532 + -0.5 2,706,533 - -0.3 2,706,533 - -0.7 2,706,617 + +0.4 2,706,617 + -0.7 2,706,618 - Echvi_2284 0.10 -1.9 2,706,621 + Echvi_2284 0.13 -0.2 2,706,621 + Echvi_2284 0.13 -0.4 2,706,622 - Echvi_2284 0.13 -0.0 2,706,622 - Echvi_2284 0.13 -0.2 2,706,622 - Echvi_2284 0.13 -0.3 2,706,680 + Echvi_2284 0.56 -1.4 2,706,746 - -1.5 2,706,752 + -0.2 2,706,877 + -0.6 2,706,906 - +1.5 2,707,014 + Echvi_2285 0.12 -0.1 2,707,070 - Echvi_2285 0.20 +0.4 2,707,096 + Echvi_2285 0.24 +0.1 2,707,096 + Echvi_2285 0.24 -0.1 2,707,096 + Echvi_2285 0.24 -2.6 2,707,096 + +0.1 2,707,096 + Echvi_2285 0.24 -0.2 2,707,096 + Echvi_2285 0.24 -0.3 2,707,097 - Echvi_2285 0.24 +0.8 2,707,097 - Echvi_2285 0.24 -1.4 2,707,097 - Echvi_2285 0.24 -1.9 2,707,097 - Echvi_2285 0.24 +0.2 2,707,097 - Echvi_2285 0.24 +0.4 2,707,104 + Echvi_2285 0.25 -1.0 2,707,212 - Echvi_2285 0.41 +0.6 2,707,245 + Echvi_2285 0.46 -1.2 2,707,333 + Echvi_2285 0.59 -0.2 2,707,333 + Echvi_2285 0.59 -0.8 2,707,334 - Echvi_2285 0.59 -1.0 2,707,334 - Echvi_2285 0.59 -1.5 2,707,399 + Echvi_2285 0.69 -0.0 2,707,399 + Echvi_2285 0.69 -1.3 2,707,425 + Echvi_2285 0.72 -0.4 2,707,558 - -0.1 2,707,560 + +0.8 2,707,561 - -0.3 2,707,569 + -0.5 2,707,613 + +0.6 2,707,645 + +0.7 2,707,646 - +1.5 2,707,646 - -1.0 2,707,646 - +0.7 2,707,679 + -2.0 2,707,683 + +0.2
Or see this region's nucleotide sequence