Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1823 and Echvi_1824 are separated by 60 nucleotides Echvi_1824 and Echvi_1825 are separated by 75 nucleotides Echvi_1825 and Echvi_1826 are separated by 1 nucleotides
Echvi_1823: Echvi_1823 - ribosome biogenesis GTP-binding protein YsxC/EngB, at 2,140,684 to 2,141,289
_1823
Echvi_1824: Echvi_1824 - hypothetical protein, at 2,141,350 to 2,141,787
_1824
Echvi_1825: Echvi_1825 - hypothetical protein, at 2,141,863 to 2,142,165
_1825
Echvi_1826: Echvi_1826 - Fructose-1,6-bisphosphatase, at 2,142,167 to 2,143,198
_1826
Position (kb)
2141
2142
2143 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2141.293 kb on - strand at 2141.321 kb on - strand at 2141.337 kb on + strand at 2141.340 kb on + strand at 2141.366 kb on + strand at 2141.367 kb on - strand at 2141.367 kb on - strand at 2141.395 kb on + strand, within Echvi_1824 at 2141.395 kb on + strand, within Echvi_1824 at 2141.395 kb on + strand, within Echvi_1824 at 2141.395 kb on + strand, within Echvi_1824 at 2141.396 kb on - strand, within Echvi_1824 at 2141.396 kb on - strand, within Echvi_1824 at 2141.398 kb on - strand, within Echvi_1824 at 2141.407 kb on - strand, within Echvi_1824 at 2141.407 kb on - strand, within Echvi_1824 at 2141.407 kb on - strand, within Echvi_1824 at 2141.463 kb on - strand, within Echvi_1824 at 2141.465 kb on + strand, within Echvi_1824 at 2141.512 kb on + strand, within Echvi_1824 at 2141.512 kb on + strand, within Echvi_1824 at 2141.513 kb on - strand, within Echvi_1824 at 2141.513 kb on - strand, within Echvi_1824 at 2141.515 kb on - strand, within Echvi_1824 at 2141.515 kb on - strand, within Echvi_1824 at 2141.586 kb on + strand, within Echvi_1824 at 2141.587 kb on - strand, within Echvi_1824 at 2141.620 kb on + strand, within Echvi_1824 at 2141.620 kb on + strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.621 kb on - strand, within Echvi_1824 at 2141.622 kb on + strand, within Echvi_1824 at 2141.622 kb on + strand, within Echvi_1824 at 2141.623 kb on - strand, within Echvi_1824 at 2141.631 kb on + strand, within Echvi_1824 at 2141.631 kb on + strand, within Echvi_1824 at 2141.631 kb on + strand, within Echvi_1824 at 2141.632 kb on - strand, within Echvi_1824 at 2141.632 kb on - strand, within Echvi_1824 at 2141.640 kb on + strand, within Echvi_1824 at 2141.641 kb on - strand, within Echvi_1824 at 2141.669 kb on + strand, within Echvi_1824 at 2141.786 kb on - strand at 2141.813 kb on - strand at 2141.817 kb on - strand at 2141.868 kb on + strand at 2141.880 kb on + strand at 2141.880 kb on + strand at 2141.943 kb on - strand, within Echvi_1825 at 2142.158 kb on - strand at 2142.169 kb on - strand at 2142.348 kb on + strand, within Echvi_1826 at 2142.360 kb on - strand, within Echvi_1826 at 2142.360 kb on - strand, within Echvi_1826 at 2142.397 kb on + strand, within Echvi_1826 at 2142.398 kb on - strand, within Echvi_1826 at 2142.400 kb on - strand, within Echvi_1826 at 2142.453 kb on + strand at 2142.454 kb on - strand, within Echvi_1826 at 2142.543 kb on + strand, within Echvi_1826 at 2142.544 kb on - strand, within Echvi_1826 at 2142.544 kb on - strand, within Echvi_1826 at 2142.544 kb on - strand, within Echvi_1826 at 2142.544 kb on - strand, within Echvi_1826 at 2142.546 kb on - strand, within Echvi_1826 at 2142.546 kb on - strand, within Echvi_1826 at 2142.546 kb on - strand, within Echvi_1826 at 2142.627 kb on - strand, within Echvi_1826 at 2142.670 kb on - strand, within Echvi_1826 at 2142.678 kb on + strand, within Echvi_1826 at 2142.678 kb on + strand, within Echvi_1826 at 2142.678 kb on + strand, within Echvi_1826 at 2142.678 kb on + strand, within Echvi_1826 at 2142.781 kb on + strand, within Echvi_1826 at 2142.782 kb on - strand, within Echvi_1826 at 2142.799 kb on + strand, within Echvi_1826 at 2142.837 kb on + strand, within Echvi_1826 at 2142.837 kb on + strand, within Echvi_1826 at 2142.978 kb on - strand, within Echvi_1826 at 2142.978 kb on - strand, within Echvi_1826 at 2143.073 kb on + strand, within Echvi_1826 at 2143.117 kb on + strand at 2143.155 kb on + strand at 2143.160 kb on + strand at 2143.160 kb on + strand at 2143.160 kb on + strand at 2143.161 kb on - strand at 2143.161 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 2,141,293 - +0.2 2,141,321 - +1.8 2,141,337 + -0.2 2,141,340 + -1.5 2,141,366 + -0.9 2,141,367 - -0.4 2,141,367 - -2.2 2,141,395 + Echvi_1824 0.10 -1.2 2,141,395 + Echvi_1824 0.10 +0.1 2,141,395 + Echvi_1824 0.10 -0.9 2,141,395 + Echvi_1824 0.10 -0.3 2,141,396 - Echvi_1824 0.11 -0.2 2,141,396 - Echvi_1824 0.11 +0.2 2,141,398 - Echvi_1824 0.11 -0.5 2,141,407 - Echvi_1824 0.13 -1.1 2,141,407 - Echvi_1824 0.13 -1.1 2,141,407 - Echvi_1824 0.13 -0.0 2,141,463 - Echvi_1824 0.26 -0.2 2,141,465 + Echvi_1824 0.26 -0.9 2,141,512 + Echvi_1824 0.37 +0.5 2,141,512 + Echvi_1824 0.37 -0.5 2,141,513 - Echvi_1824 0.37 -1.2 2,141,513 - Echvi_1824 0.37 +0.2 2,141,515 - Echvi_1824 0.38 -2.1 2,141,515 - Echvi_1824 0.38 +0.0 2,141,586 + Echvi_1824 0.54 +0.3 2,141,587 - Echvi_1824 0.54 +0.6 2,141,620 + Echvi_1824 0.62 -0.4 2,141,620 + Echvi_1824 0.62 +0.1 2,141,621 - Echvi_1824 0.62 -0.7 2,141,621 - Echvi_1824 0.62 -0.3 2,141,621 - Echvi_1824 0.62 -0.2 2,141,621 - Echvi_1824 0.62 -0.8 2,141,621 - Echvi_1824 0.62 -0.9 2,141,621 - Echvi_1824 0.62 -0.0 2,141,621 - Echvi_1824 0.62 -0.9 2,141,621 - Echvi_1824 0.62 -0.5 2,141,621 - Echvi_1824 0.62 -0.0 2,141,622 + Echvi_1824 0.62 -0.7 2,141,622 + Echvi_1824 0.62 +0.6 2,141,623 - Echvi_1824 0.62 +0.6 2,141,631 + Echvi_1824 0.64 +2.0 2,141,631 + Echvi_1824 0.64 -1.6 2,141,631 + Echvi_1824 0.64 -0.3 2,141,632 - Echvi_1824 0.64 -1.3 2,141,632 - Echvi_1824 0.64 +0.6 2,141,640 + Echvi_1824 0.66 -0.7 2,141,641 - Echvi_1824 0.66 -0.1 2,141,669 + Echvi_1824 0.73 +0.6 2,141,786 - +1.3 2,141,813 - -0.8 2,141,817 - -0.8 2,141,868 + +0.7 2,141,880 + +0.5 2,141,880 + -1.3 2,141,943 - Echvi_1825 0.26 -0.5 2,142,158 - +1.1 2,142,169 - -0.1 2,142,348 + Echvi_1826 0.18 -0.6 2,142,360 - Echvi_1826 0.19 -0.7 2,142,360 - Echvi_1826 0.19 +0.4 2,142,397 + Echvi_1826 0.22 +0.7 2,142,398 - Echvi_1826 0.22 +0.0 2,142,400 - Echvi_1826 0.23 +0.4 2,142,453 + +3.7 2,142,454 - Echvi_1826 0.28 -0.0 2,142,543 + Echvi_1826 0.36 +0.5 2,142,544 - Echvi_1826 0.37 +0.9 2,142,544 - Echvi_1826 0.37 -0.6 2,142,544 - Echvi_1826 0.37 +0.0 2,142,544 - Echvi_1826 0.37 +0.7 2,142,546 - Echvi_1826 0.37 +2.4 2,142,546 - Echvi_1826 0.37 +0.2 2,142,546 - Echvi_1826 0.37 +0.2 2,142,627 - Echvi_1826 0.45 +0.3 2,142,670 - Echvi_1826 0.49 -1.0 2,142,678 + Echvi_1826 0.50 -0.3 2,142,678 + Echvi_1826 0.50 -1.2 2,142,678 + Echvi_1826 0.50 -0.8 2,142,678 + Echvi_1826 0.50 -1.9 2,142,781 + Echvi_1826 0.59 -2.0 2,142,782 - Echvi_1826 0.60 +0.0 2,142,799 + Echvi_1826 0.61 -0.5 2,142,837 + Echvi_1826 0.65 -0.8 2,142,837 + Echvi_1826 0.65 -0.4 2,142,978 - Echvi_1826 0.79 +0.1 2,142,978 - Echvi_1826 0.79 +1.2 2,143,073 + Echvi_1826 0.88 -0.1 2,143,117 + -0.5 2,143,155 + -1.3 2,143,160 + -1.7 2,143,160 + +0.4 2,143,160 + +1.3 2,143,161 - -0.1 2,143,161 - -0.7
Or see this region's nucleotide sequence