Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1296 and Echvi_1297 are separated by 78 nucleotides Echvi_1297 and Echvi_1298 are separated by 71 nucleotides
Echvi_1296: Echvi_1296 - glutamyl-tRNA synthetase, bacterial family, at 1,491,892 to 1,493,433
_1296
Echvi_1297: Echvi_1297 - hypothetical protein, at 1,493,512 to 1,493,715
_1297
Echvi_1298: Echvi_1298 - hypothetical protein, at 1,493,787 to 1,494,470
_1298
Position (kb)
1493
1494 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1493.431 kb on + strand at 1493.432 kb on - strand at 1493.436 kb on + strand at 1493.471 kb on + strand at 1493.471 kb on + strand at 1493.471 kb on + strand at 1493.471 kb on + strand at 1493.471 kb on + strand at 1493.472 kb on - strand at 1493.475 kb on + strand at 1493.476 kb on - strand at 1493.492 kb on - strand at 1493.600 kb on + strand, within Echvi_1297 at 1493.601 kb on - strand, within Echvi_1297 at 1493.601 kb on - strand, within Echvi_1297 at 1493.622 kb on + strand, within Echvi_1297 at 1493.622 kb on + strand, within Echvi_1297 at 1493.623 kb on - strand, within Echvi_1297 at 1493.668 kb on - strand, within Echvi_1297 at 1493.754 kb on - strand at 1493.765 kb on + strand at 1493.774 kb on + strand at 1493.774 kb on + strand at 1493.778 kb on + strand at 1493.778 kb on + strand at 1493.833 kb on + strand at 1493.916 kb on + strand, within Echvi_1298 at 1493.950 kb on + strand, within Echvi_1298 at 1493.950 kb on + strand, within Echvi_1298 at 1493.976 kb on + strand, within Echvi_1298 at 1493.976 kb on + strand, within Echvi_1298 at 1493.977 kb on - strand, within Echvi_1298 at 1493.977 kb on - strand, within Echvi_1298 at 1493.997 kb on + strand, within Echvi_1298 at 1493.997 kb on + strand, within Echvi_1298 at 1493.997 kb on + strand, within Echvi_1298 at 1494.036 kb on + strand, within Echvi_1298 at 1494.037 kb on - strand, within Echvi_1298 at 1494.051 kb on + strand, within Echvi_1298 at 1494.102 kb on + strand, within Echvi_1298 at 1494.102 kb on + strand, within Echvi_1298 at 1494.132 kb on + strand, within Echvi_1298 at 1494.231 kb on - strand, within Echvi_1298 at 1494.252 kb on - strand, within Echvi_1298 at 1494.256 kb on - strand, within Echvi_1298 at 1494.288 kb on - strand, within Echvi_1298 at 1494.291 kb on + strand, within Echvi_1298 at 1494.291 kb on + strand, within Echvi_1298 at 1494.292 kb on - strand, within Echvi_1298 at 1494.314 kb on + strand, within Echvi_1298 at 1494.315 kb on - strand, within Echvi_1298 at 1494.315 kb on - strand, within Echvi_1298 at 1494.332 kb on + strand, within Echvi_1298 at 1494.355 kb on + strand, within Echvi_1298 at 1494.355 kb on + strand, within Echvi_1298 at 1494.356 kb on - strand, within Echvi_1298 at 1494.366 kb on + strand, within Echvi_1298 at 1494.366 kb on + strand, within Echvi_1298 at 1494.367 kb on - strand, within Echvi_1298 at 1494.441 kb on + strand at 1494.454 kb on + strand at 1494.455 kb on - strand at 1494.468 kb on + strand at 1494.495 kb on + strand at 1494.499 kb on + strand at 1494.499 kb on + strand at 1494.499 kb on + strand at 1494.499 kb on + strand at 1494.500 kb on - strand at 1494.500 kb on - strand at 1494.500 kb on - strand at 1494.554 kb on + strand at 1494.584 kb on + strand at 1494.585 kb on - strand at 1494.663 kb on + strand at 1494.663 kb on + strand at 1494.664 kb on - strand at 1494.677 kb on + strand at 1494.678 kb on - strand at 1494.701 kb on + strand at 1494.702 kb on - strand at 1494.702 kb on - strand at 1494.705 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 1,493,431 + -1.1 1,493,432 - +0.6 1,493,436 + +0.3 1,493,471 + -0.3 1,493,471 + -0.4 1,493,471 + +1.3 1,493,471 + +0.2 1,493,471 + -0.9 1,493,472 - -1.3 1,493,475 + +0.5 1,493,476 - -0.7 1,493,492 - +0.4 1,493,600 + Echvi_1297 0.43 -0.6 1,493,601 - Echvi_1297 0.44 -2.2 1,493,601 - Echvi_1297 0.44 -1.4 1,493,622 + Echvi_1297 0.54 -2.4 1,493,622 + Echvi_1297 0.54 -0.9 1,493,623 - Echvi_1297 0.54 -0.4 1,493,668 - Echvi_1297 0.76 -1.3 1,493,754 - -0.2 1,493,765 + +0.6 1,493,774 + -0.5 1,493,774 + +0.5 1,493,778 + +2.0 1,493,778 + -0.8 1,493,833 + -0.4 1,493,916 + Echvi_1298 0.19 +0.5 1,493,950 + Echvi_1298 0.24 +0.1 1,493,950 + Echvi_1298 0.24 +1.5 1,493,976 + Echvi_1298 0.28 -0.1 1,493,976 + Echvi_1298 0.28 +0.4 1,493,977 - Echvi_1298 0.28 -0.7 1,493,977 - Echvi_1298 0.28 -1.8 1,493,997 + Echvi_1298 0.31 +0.3 1,493,997 + Echvi_1298 0.31 -0.2 1,493,997 + Echvi_1298 0.31 +0.9 1,494,036 + Echvi_1298 0.36 +0.0 1,494,037 - Echvi_1298 0.37 -0.9 1,494,051 + Echvi_1298 0.39 +1.0 1,494,102 + Echvi_1298 0.46 -1.2 1,494,102 + Echvi_1298 0.46 -1.6 1,494,132 + Echvi_1298 0.50 -0.1 1,494,231 - Echvi_1298 0.65 -1.2 1,494,252 - Echvi_1298 0.68 -1.6 1,494,256 - Echvi_1298 0.69 -0.0 1,494,288 - Echvi_1298 0.73 +0.2 1,494,291 + Echvi_1298 0.74 -1.8 1,494,291 + Echvi_1298 0.74 -0.1 1,494,292 - Echvi_1298 0.74 -3.0 1,494,314 + Echvi_1298 0.77 +2.7 1,494,315 - Echvi_1298 0.77 -0.9 1,494,315 - Echvi_1298 0.77 +0.9 1,494,332 + Echvi_1298 0.80 +0.8 1,494,355 + Echvi_1298 0.83 -1.1 1,494,355 + Echvi_1298 0.83 -0.2 1,494,356 - Echvi_1298 0.83 -0.6 1,494,366 + Echvi_1298 0.85 -0.3 1,494,366 + Echvi_1298 0.85 +0.7 1,494,367 - Echvi_1298 0.85 -0.1 1,494,441 + -0.5 1,494,454 + -1.4 1,494,455 - -0.9 1,494,468 + +2.1 1,494,495 + -0.4 1,494,499 + +0.7 1,494,499 + -0.3 1,494,499 + -0.8 1,494,499 + +1.5 1,494,500 - -1.6 1,494,500 - -0.2 1,494,500 - +0.3 1,494,554 + +0.3 1,494,584 + +1.3 1,494,585 - +0.1 1,494,663 + +0.6 1,494,663 + -0.2 1,494,664 - +0.5 1,494,677 + +0.2 1,494,678 - -0.9 1,494,701 + +1.2 1,494,702 - -0.6 1,494,702 - -0.0 1,494,705 + +0.3
Or see this region's nucleotide sequence