Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1279 and Echvi_1280 are separated by 85 nucleotides Echvi_1280 and Echvi_1281 overlap by 17 nucleotides Echvi_1281 and Echvi_1282 are separated by 14 nucleotides
Echvi_1279: Echvi_1279 - Glycerol kinase, at 1,467,458 to 1,468,960
_1279
Echvi_1280: Echvi_1280 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 1,469,046 to 1,470,002
_1280
Echvi_1281: Echvi_1281 - hypothetical protein, at 1,469,986 to 1,470,183
_1281
Echvi_1282: Echvi_1282 - ABC-type sugar transport system, ATPase component, at 1,470,198 to 1,471,706
_1282
Position (kb)
1469
1470
1471 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1468.050 kb on + strand, within Echvi_1279 at 1468.050 kb on + strand, within Echvi_1279 at 1468.088 kb on + strand, within Echvi_1279 at 1468.088 kb on + strand, within Echvi_1279 at 1468.088 kb on + strand, within Echvi_1279 at 1468.088 kb on + strand, within Echvi_1279 at 1468.088 kb on + strand, within Echvi_1279 at 1468.089 kb on - strand, within Echvi_1279 at 1468.089 kb on - strand, within Echvi_1279 at 1468.089 kb on - strand, within Echvi_1279 at 1468.089 kb on - strand, within Echvi_1279 at 1468.089 kb on - strand, within Echvi_1279 at 1468.111 kb on + strand, within Echvi_1279 at 1468.330 kb on + strand, within Echvi_1279 at 1468.413 kb on + strand, within Echvi_1279 at 1468.442 kb on + strand, within Echvi_1279 at 1468.451 kb on - strand, within Echvi_1279 at 1468.467 kb on + strand, within Echvi_1279 at 1468.517 kb on + strand, within Echvi_1279 at 1468.534 kb on + strand, within Echvi_1279 at 1468.571 kb on - strand, within Echvi_1279 at 1468.726 kb on + strand, within Echvi_1279 at 1468.726 kb on + strand, within Echvi_1279 at 1468.775 kb on + strand, within Echvi_1279 at 1468.910 kb on - strand at 1468.918 kb on + strand at 1468.918 kb on + strand at 1468.919 kb on - strand at 1469.021 kb on + strand at 1469.021 kb on + strand at 1469.022 kb on - strand at 1469.028 kb on - strand at 1469.028 kb on - strand at 1469.038 kb on + strand at 1469.038 kb on + strand at 1469.263 kb on + strand, within Echvi_1280 at 1469.428 kb on + strand, within Echvi_1280 at 1469.428 kb on + strand, within Echvi_1280 at 1469.642 kb on + strand, within Echvi_1280 at 1469.688 kb on + strand, within Echvi_1280 at 1469.715 kb on + strand, within Echvi_1280 at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1469.942 kb on + strand at 1470.017 kb on + strand, within Echvi_1281 at 1470.017 kb on + strand, within Echvi_1281 at 1470.018 kb on - strand, within Echvi_1281 at 1470.037 kb on + strand, within Echvi_1281 at 1470.037 kb on + strand, within Echvi_1281 at 1470.044 kb on + strand, within Echvi_1281 at 1470.052 kb on + strand, within Echvi_1281 at 1470.052 kb on + strand, within Echvi_1281 at 1470.085 kb on + strand, within Echvi_1281 at 1470.085 kb on + strand, within Echvi_1281 at 1470.085 kb on + strand, within Echvi_1281 at 1470.106 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.108 kb on + strand, within Echvi_1281 at 1470.122 kb on - strand, within Echvi_1281 at 1470.141 kb on + strand, within Echvi_1281 at 1470.345 kb on + strand at 1470.345 kb on + strand at 1470.389 kb on + strand, within Echvi_1282 at 1470.443 kb on + strand, within Echvi_1282 at 1470.549 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.597 kb on + strand, within Echvi_1282 at 1470.598 kb on - strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.620 kb on + strand, within Echvi_1282 at 1470.621 kb on - strand, within Echvi_1282 at 1470.624 kb on + strand, within Echvi_1282 at 1470.624 kb on + strand, within Echvi_1282 at 1470.818 kb on + strand, within Echvi_1282 at 1470.819 kb on - strand, within Echvi_1282
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 1,468,050 + Echvi_1279 0.39 -0.0 1,468,050 + Echvi_1279 0.39 -0.1 1,468,088 + Echvi_1279 0.42 -0.3 1,468,088 + Echvi_1279 0.42 +1.1 1,468,088 + Echvi_1279 0.42 +0.0 1,468,088 + Echvi_1279 0.42 -0.0 1,468,088 + Echvi_1279 0.42 -1.3 1,468,089 - Echvi_1279 0.42 +0.1 1,468,089 - Echvi_1279 0.42 +1.1 1,468,089 - Echvi_1279 0.42 +0.2 1,468,089 - Echvi_1279 0.42 +1.4 1,468,089 - Echvi_1279 0.42 -0.9 1,468,111 + Echvi_1279 0.43 -0.8 1,468,330 + Echvi_1279 0.58 +0.3 1,468,413 + Echvi_1279 0.64 -0.4 1,468,442 + Echvi_1279 0.65 +0.8 1,468,451 - Echvi_1279 0.66 +1.6 1,468,467 + Echvi_1279 0.67 +0.9 1,468,517 + Echvi_1279 0.70 +0.1 1,468,534 + Echvi_1279 0.72 -0.4 1,468,571 - Echvi_1279 0.74 -0.6 1,468,726 + Echvi_1279 0.84 -2.0 1,468,726 + Echvi_1279 0.84 +0.6 1,468,775 + Echvi_1279 0.88 +0.8 1,468,910 - -0.9 1,468,918 + -0.9 1,468,918 + -2.4 1,468,919 - -1.3 1,469,021 + +0.6 1,469,021 + +0.0 1,469,022 - -1.1 1,469,028 - -0.8 1,469,028 - +0.0 1,469,038 + +0.3 1,469,038 + -1.6 1,469,263 + Echvi_1280 0.23 +0.6 1,469,428 + Echvi_1280 0.40 -2.5 1,469,428 + Echvi_1280 0.40 -2.8 1,469,642 + Echvi_1280 0.62 -0.8 1,469,688 + Echvi_1280 0.67 +0.4 1,469,715 + Echvi_1280 0.70 +0.5 1,469,942 + -0.1 1,469,942 + -1.4 1,469,942 + -0.5 1,469,942 + +0.9 1,469,942 + -0.3 1,469,942 + -0.7 1,469,942 + +0.9 1,470,017 + Echvi_1281 0.16 -0.1 1,470,017 + Echvi_1281 0.16 +1.5 1,470,018 - Echvi_1281 0.16 +2.7 1,470,037 + Echvi_1281 0.26 -0.5 1,470,037 + Echvi_1281 0.26 -1.3 1,470,044 + Echvi_1281 0.29 +0.3 1,470,052 + Echvi_1281 0.33 +1.0 1,470,052 + Echvi_1281 0.33 -0.1 1,470,085 + Echvi_1281 0.50 -0.1 1,470,085 + Echvi_1281 0.50 -0.6 1,470,085 + Echvi_1281 0.50 -1.7 1,470,106 + Echvi_1281 0.61 -1.0 1,470,108 + Echvi_1281 0.62 -0.0 1,470,108 + Echvi_1281 0.62 +1.4 1,470,108 + Echvi_1281 0.62 -1.6 1,470,108 + Echvi_1281 0.62 -0.1 1,470,122 - Echvi_1281 0.69 +1.7 1,470,141 + Echvi_1281 0.78 +0.9 1,470,345 + -1.0 1,470,345 + +0.5 1,470,389 + Echvi_1282 0.13 +0.4 1,470,443 + Echvi_1282 0.16 -1.0 1,470,549 + Echvi_1282 0.23 -0.5 1,470,597 + Echvi_1282 0.26 -0.2 1,470,597 + Echvi_1282 0.26 -0.1 1,470,597 + Echvi_1282 0.26 -0.7 1,470,597 + Echvi_1282 0.26 +0.6 1,470,598 - Echvi_1282 0.27 -0.5 1,470,620 + Echvi_1282 0.28 -1.3 1,470,620 + Echvi_1282 0.28 +0.6 1,470,620 + Echvi_1282 0.28 +0.2 1,470,620 + Echvi_1282 0.28 +0.2 1,470,621 - Echvi_1282 0.28 -0.5 1,470,624 + Echvi_1282 0.28 -0.6 1,470,624 + Echvi_1282 0.28 +0.2 1,470,818 + Echvi_1282 0.41 -1.4 1,470,819 - Echvi_1282 0.41 -0.6
Or see this region's nucleotide sequence