Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1248 and Echvi_1249 are separated by 158 nucleotides Echvi_1249 and Echvi_1250 are separated by 21 nucleotides Echvi_1250 and Echvi_1251 are separated by 182 nucleotides
Echvi_1248: Echvi_1248 - A/G-specific adenine glycosylase, at 1,434,868 to 1,435,941
_1248
Echvi_1249: Echvi_1249 - Bacterial nucleoid DNA-binding protein, at 1,436,100 to 1,436,408
_1249
Echvi_1250: Echvi_1250 - hypothetical protein, at 1,436,430 to 1,437,248
_1250
Echvi_1251: Echvi_1251 - ribonuclease, Rne/Rng family, at 1,437,431 to 1,439,002
_1251
Position (kb)
1436
1437
1438 Strain fitness (log2 ratio)
-2
-1
0
1 at 1435.470 kb on + strand, within Echvi_1248 at 1435.509 kb on + strand, within Echvi_1248 at 1435.585 kb on - strand, within Echvi_1248 at 1435.585 kb on - strand, within Echvi_1248 at 1435.586 kb on + strand, within Echvi_1248 at 1435.586 kb on + strand, within Echvi_1248 at 1435.586 kb on + strand, within Echvi_1248 at 1435.602 kb on + strand, within Echvi_1248 at 1435.603 kb on - strand, within Echvi_1248 at 1435.622 kb on + strand, within Echvi_1248 at 1435.623 kb on - strand, within Echvi_1248 at 1435.697 kb on + strand, within Echvi_1248 at 1435.698 kb on - strand, within Echvi_1248 at 1435.700 kb on + strand, within Echvi_1248 at 1435.700 kb on + strand, within Echvi_1248 at 1435.701 kb on - strand, within Echvi_1248 at 1435.701 kb on - strand, within Echvi_1248 at 1435.701 kb on - strand, within Echvi_1248 at 1435.759 kb on + strand, within Echvi_1248 at 1435.759 kb on + strand, within Echvi_1248 at 1435.759 kb on + strand, within Echvi_1248 at 1435.760 kb on - strand, within Echvi_1248 at 1435.760 kb on - strand, within Echvi_1248 at 1435.760 kb on - strand, within Echvi_1248 at 1435.760 kb on - strand, within Echvi_1248 at 1435.770 kb on - strand, within Echvi_1248 at 1435.853 kb on + strand at 1435.902 kb on - strand at 1436.085 kb on + strand at 1436.384 kb on + strand at 1436.487 kb on + strand at 1436.715 kb on + strand, within Echvi_1250 at 1436.789 kb on + strand, within Echvi_1250 at 1436.931 kb on + strand, within Echvi_1250 at 1436.932 kb on - strand, within Echvi_1250 at 1437.015 kb on + strand, within Echvi_1250 at 1437.020 kb on + strand, within Echvi_1250 at 1437.093 kb on + strand, within Echvi_1250 at 1437.227 kb on + strand at 1437.365 kb on + strand at 1437.365 kb on + strand at 1437.365 kb on + strand at 1437.368 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 1,435,470 + Echvi_1248 0.56 -0.9 1,435,509 + Echvi_1248 0.60 -0.5 1,435,585 - Echvi_1248 0.67 -1.3 1,435,585 - Echvi_1248 0.67 -1.5 1,435,586 + Echvi_1248 0.67 -1.4 1,435,586 + Echvi_1248 0.67 -0.0 1,435,586 + Echvi_1248 0.67 -2.2 1,435,602 + Echvi_1248 0.68 -0.1 1,435,603 - Echvi_1248 0.68 -0.6 1,435,622 + Echvi_1248 0.70 -1.3 1,435,623 - Echvi_1248 0.70 +0.4 1,435,697 + Echvi_1248 0.77 +0.4 1,435,698 - Echvi_1248 0.77 -0.4 1,435,700 + Echvi_1248 0.77 -2.2 1,435,700 + Echvi_1248 0.77 -0.2 1,435,701 - Echvi_1248 0.78 -0.0 1,435,701 - Echvi_1248 0.78 -0.4 1,435,701 - Echvi_1248 0.78 -1.0 1,435,759 + Echvi_1248 0.83 -0.3 1,435,759 + Echvi_1248 0.83 -0.0 1,435,759 + Echvi_1248 0.83 -0.1 1,435,760 - Echvi_1248 0.83 -0.6 1,435,760 - Echvi_1248 0.83 -0.1 1,435,760 - Echvi_1248 0.83 +0.2 1,435,760 - Echvi_1248 0.83 +0.2 1,435,770 - Echvi_1248 0.84 -0.5 1,435,853 + +0.9 1,435,902 - +0.9 1,436,085 + -0.3 1,436,384 + -0.8 1,436,487 + -0.5 1,436,715 + Echvi_1250 0.35 -0.3 1,436,789 + Echvi_1250 0.44 -1.9 1,436,931 + Echvi_1250 0.61 -2.3 1,436,932 - Echvi_1250 0.61 -0.3 1,437,015 + Echvi_1250 0.71 +0.0 1,437,020 + Echvi_1250 0.72 -1.3 1,437,093 + Echvi_1250 0.81 -1.9 1,437,227 + +0.2 1,437,365 + +0.5 1,437,365 + +1.2 1,437,365 + -0.7 1,437,368 + -0.7
Or see this region's nucleotide sequence