Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0979 and Echvi_0980 are separated by 72 nucleotides Echvi_0980 and Echvi_0981 overlap by 4 nucleotides Echvi_0981 and Echvi_0982 are separated by 53 nucleotides
Echvi_0979: Echvi_0979 - siroheme synthase, N-terminal domain, at 1,136,652 to 1,137,224
_0979
Echvi_0980: Echvi_0980 - uroporphyrin-III C-methyltransferase, at 1,137,297 to 1,138,061
_0980
Echvi_0981: Echvi_0981 - Sulfite reductase, beta subunit (hemoprotein), at 1,138,058 to 1,140,160
_0981
Echvi_0982: Echvi_0982 - sulfate adenylyltransferase, large subunit, at 1,140,214 to 1,141,473
_0982
Position (kb)
1138
1139
1140
1141 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1137.169 kb on - strand at 1137.239 kb on - strand at 1137.239 kb on - strand at 1137.239 kb on - strand at 1137.281 kb on - strand at 1137.281 kb on - strand at 1137.288 kb on + strand at 1137.288 kb on + strand at 1137.289 kb on - strand at 1137.298 kb on + strand at 1137.298 kb on + strand at 1137.299 kb on - strand at 1137.331 kb on - strand at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.399 kb on + strand, within Echvi_0980 at 1137.400 kb on - strand, within Echvi_0980 at 1137.404 kb on + strand, within Echvi_0980 at 1137.404 kb on + strand, within Echvi_0980 at 1137.411 kb on + strand, within Echvi_0980 at 1137.412 kb on - strand, within Echvi_0980 at 1137.412 kb on - strand, within Echvi_0980 at 1137.412 kb on - strand, within Echvi_0980 at 1137.420 kb on + strand, within Echvi_0980 at 1137.420 kb on + strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.421 kb on - strand, within Echvi_0980 at 1137.422 kb on + strand, within Echvi_0980 at 1137.422 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.581 kb on + strand, within Echvi_0980 at 1137.673 kb on + strand, within Echvi_0980 at 1137.711 kb on + strand, within Echvi_0980 at 1137.712 kb on - strand, within Echvi_0980 at 1137.712 kb on - strand, within Echvi_0980 at 1137.824 kb on - strand, within Echvi_0980 at 1137.824 kb on - strand, within Echvi_0980 at 1137.845 kb on + strand, within Echvi_0980 at 1137.892 kb on - strand, within Echvi_0980 at 1137.892 kb on - strand, within Echvi_0980 at 1137.932 kb on + strand, within Echvi_0980 at 1137.950 kb on - strand, within Echvi_0980 at 1137.954 kb on + strand, within Echvi_0980 at 1137.954 kb on + strand, within Echvi_0980 at 1137.954 kb on + strand, within Echvi_0980 at 1137.955 kb on - strand, within Echvi_0980 at 1137.990 kb on + strand at 1137.991 kb on - strand at 1138.029 kb on + strand at 1138.057 kb on - strand at 1138.057 kb on - strand at 1138.067 kb on + strand at 1138.068 kb on - strand at 1138.068 kb on - strand at 1138.125 kb on + strand at 1138.125 kb on + strand at 1138.966 kb on + strand, within Echvi_0981 at 1138.966 kb on + strand, within Echvi_0981 at 1139.158 kb on + strand, within Echvi_0981 at 1139.788 kb on + strand, within Echvi_0981 at 1139.792 kb on - strand, within Echvi_0981 at 1140.065 kb on + strand at 1140.065 kb on + strand at 1140.137 kb on + strand at 1140.161 kb on - strand at 1140.177 kb on - strand at 1140.216 kb on - strand at 1140.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 1,137,169 - -0.2 1,137,239 - +0.6 1,137,239 - +1.7 1,137,239 - +1.1 1,137,281 - +0.4 1,137,281 - +1.9 1,137,288 + -1.4 1,137,288 + -0.4 1,137,289 - +1.9 1,137,298 + -2.3 1,137,298 + -2.5 1,137,299 - +1.4 1,137,331 - +1.9 1,137,399 + Echvi_0980 0.13 -0.7 1,137,399 + Echvi_0980 0.13 +0.9 1,137,399 + Echvi_0980 0.13 +0.4 1,137,399 + Echvi_0980 0.13 -1.7 1,137,399 + Echvi_0980 0.13 -0.1 1,137,400 - Echvi_0980 0.13 +0.6 1,137,404 + Echvi_0980 0.14 -0.1 1,137,404 + Echvi_0980 0.14 -1.1 1,137,411 + Echvi_0980 0.15 -1.5 1,137,412 - Echvi_0980 0.15 +1.3 1,137,412 - Echvi_0980 0.15 +0.2 1,137,412 - Echvi_0980 0.15 -0.3 1,137,420 + Echvi_0980 0.16 -1.9 1,137,420 + Echvi_0980 0.16 -0.9 1,137,421 - Echvi_0980 0.16 +1.3 1,137,421 - Echvi_0980 0.16 -0.0 1,137,421 - Echvi_0980 0.16 +0.9 1,137,421 - Echvi_0980 0.16 +0.8 1,137,421 - Echvi_0980 0.16 +0.8 1,137,421 - Echvi_0980 0.16 +0.2 1,137,421 - Echvi_0980 0.16 -0.5 1,137,421 - Echvi_0980 0.16 +0.1 1,137,421 - Echvi_0980 0.16 -0.3 1,137,421 - Echvi_0980 0.16 +0.2 1,137,421 - Echvi_0980 0.16 +0.3 1,137,422 + Echvi_0980 0.16 -2.8 1,137,422 + Echvi_0980 0.16 +0.0 1,137,581 + Echvi_0980 0.37 +0.9 1,137,581 + Echvi_0980 0.37 -2.0 1,137,581 + Echvi_0980 0.37 +0.1 1,137,581 + Echvi_0980 0.37 -1.4 1,137,673 + Echvi_0980 0.49 -1.6 1,137,711 + Echvi_0980 0.54 -1.7 1,137,712 - Echvi_0980 0.54 +1.0 1,137,712 - Echvi_0980 0.54 +0.1 1,137,824 - Echvi_0980 0.69 -0.0 1,137,824 - Echvi_0980 0.69 -0.3 1,137,845 + Echvi_0980 0.72 -0.7 1,137,892 - Echvi_0980 0.78 +0.5 1,137,892 - Echvi_0980 0.78 +0.4 1,137,932 + Echvi_0980 0.83 -1.2 1,137,950 - Echvi_0980 0.85 -1.1 1,137,954 + Echvi_0980 0.86 -0.7 1,137,954 + Echvi_0980 0.86 +1.3 1,137,954 + Echvi_0980 0.86 -1.0 1,137,955 - Echvi_0980 0.86 -0.3 1,137,990 + -0.9 1,137,991 - -0.5 1,138,029 + +0.2 1,138,057 - +0.2 1,138,057 - +1.1 1,138,067 + -0.6 1,138,068 - +0.5 1,138,068 - -0.5 1,138,125 + +0.7 1,138,125 + -0.3 1,138,966 + Echvi_0981 0.43 +0.7 1,138,966 + Echvi_0981 0.43 -1.3 1,139,158 + Echvi_0981 0.52 +0.1 1,139,788 + Echvi_0981 0.82 -0.7 1,139,792 - Echvi_0981 0.82 +1.1 1,140,065 + +1.7 1,140,065 + +2.7 1,140,137 + +0.3 1,140,161 - -1.5 1,140,177 - +1.1 1,140,216 - +0.2 1,140,216 - +0.4
Or see this region's nucleotide sequence