Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0722 and Echvi_0723 are separated by 59 nucleotides Echvi_0723 and Echvi_0724 are separated by 30 nucleotides Echvi_0724 and Echvi_0725 overlap by 4 nucleotides
Echvi_0722: Echvi_0722 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 812,825 to 814,201
_0722
Echvi_0723: Echvi_0723 - hypothetical protein, at 814,261 to 814,734
_0723
Echvi_0724: Echvi_0724 - hypothetical protein, at 814,765 to 815,304
_0724
Echvi_0725: Echvi_0725 - hypothetical protein, at 815,301 to 815,741
_0725
Position (kb) 814
815 Strain fitness (log2 ratio) -2
-1
0
1
2 at 813.302 kb on + strand, within Echvi_0722 at 813.302 kb on + strand, within Echvi_0722 at 813.302 kb on + strand, within Echvi_0722 at 813.302 kb on + strand, within Echvi_0722 at 813.303 kb on - strand, within Echvi_0722 at 813.307 kb on + strand, within Echvi_0722 at 813.308 kb on - strand, within Echvi_0722 at 813.308 kb on - strand, within Echvi_0722 at 813.308 kb on - strand, within Echvi_0722 at 813.372 kb on - strand, within Echvi_0722 at 813.548 kb on + strand, within Echvi_0722 at 813.562 kb on + strand, within Echvi_0722 at 813.600 kb on + strand, within Echvi_0722 at 813.601 kb on - strand, within Echvi_0722 at 813.654 kb on + strand, within Echvi_0722 at 813.740 kb on + strand, within Echvi_0722 at 813.740 kb on + strand, within Echvi_0722 at 813.741 kb on - strand, within Echvi_0722 at 813.741 kb on - strand, within Echvi_0722 at 813.741 kb on - strand, within Echvi_0722 at 813.741 kb on - strand, within Echvi_0722 at 813.741 kb on - strand, within Echvi_0722 at 813.788 kb on + strand, within Echvi_0722 at 813.871 kb on - strand, within Echvi_0722 at 813.874 kb on + strand, within Echvi_0722 at 813.875 kb on - strand, within Echvi_0722 at 813.875 kb on - strand, within Echvi_0722 at 813.875 kb on - strand, within Echvi_0722 at 813.941 kb on - strand, within Echvi_0722 at 813.950 kb on - strand, within Echvi_0722 at 813.981 kb on + strand, within Echvi_0722 at 813.982 kb on - strand, within Echvi_0722 at 813.982 kb on - strand, within Echvi_0722 at 813.982 kb on - strand, within Echvi_0722 at 814.108 kb on - strand at 814.121 kb on + strand at 814.122 kb on - strand at 814.122 kb on - strand at 814.122 kb on - strand at 814.122 kb on - strand at 814.126 kb on + strand at 814.126 kb on + strand at 814.126 kb on + strand at 814.320 kb on + strand, within Echvi_0723 at 814.321 kb on - strand, within Echvi_0723 at 814.388 kb on + strand, within Echvi_0723 at 814.389 kb on - strand, within Echvi_0723 at 814.436 kb on + strand, within Echvi_0723 at 814.437 kb on - strand, within Echvi_0723 at 814.509 kb on + strand, within Echvi_0723 at 814.652 kb on + strand, within Echvi_0723 at 814.663 kb on + strand, within Echvi_0723 at 814.672 kb on - strand, within Echvi_0723 at 814.715 kb on - strand at 814.735 kb on - strand at 814.755 kb on - strand at 814.755 kb on - strand at 814.771 kb on - strand at 814.771 kb on - strand at 814.890 kb on + strand, within Echvi_0724 at 814.992 kb on - strand, within Echvi_0724 at 814.992 kb on - strand, within Echvi_0724 at 814.998 kb on + strand, within Echvi_0724 at 815.027 kb on + strand, within Echvi_0724 at 815.183 kb on + strand, within Echvi_0724 at 815.183 kb on + strand, within Echvi_0724 at 815.184 kb on - strand, within Echvi_0724 at 815.184 kb on - strand, within Echvi_0724 at 815.285 kb on - strand at 815.333 kb on + strand at 815.334 kb on - strand at 815.406 kb on - strand, within Echvi_0725 at 815.701 kb on + strand at 815.704 kb on + strand at 815.704 kb on + strand at 815.704 kb on + strand at 815.705 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 813,302 + Echvi_0722 0.35 -0.8 813,302 + Echvi_0722 0.35 +1.2 813,302 + Echvi_0722 0.35 +0.9 813,302 + Echvi_0722 0.35 -0.5 813,303 - Echvi_0722 0.35 -0.5 813,307 + Echvi_0722 0.35 -0.1 813,308 - Echvi_0722 0.35 -0.8 813,308 - Echvi_0722 0.35 +0.6 813,308 - Echvi_0722 0.35 -0.9 813,372 - Echvi_0722 0.40 +0.0 813,548 + Echvi_0722 0.53 -0.6 813,562 + Echvi_0722 0.54 -0.9 813,600 + Echvi_0722 0.56 -0.6 813,601 - Echvi_0722 0.56 +0.2 813,654 + Echvi_0722 0.60 -0.3 813,740 + Echvi_0722 0.66 +0.3 813,740 + Echvi_0722 0.66 -0.1 813,741 - Echvi_0722 0.67 -0.6 813,741 - Echvi_0722 0.67 -0.3 813,741 - Echvi_0722 0.67 -2.3 813,741 - Echvi_0722 0.67 +0.1 813,741 - Echvi_0722 0.67 +1.0 813,788 + Echvi_0722 0.70 +1.3 813,871 - Echvi_0722 0.76 +0.4 813,874 + Echvi_0722 0.76 +0.6 813,875 - Echvi_0722 0.76 +0.8 813,875 - Echvi_0722 0.76 -2.1 813,875 - Echvi_0722 0.76 -1.3 813,941 - Echvi_0722 0.81 -0.0 813,950 - Echvi_0722 0.82 -0.7 813,981 + Echvi_0722 0.84 -1.6 813,982 - Echvi_0722 0.84 +1.6 813,982 - Echvi_0722 0.84 -1.1 813,982 - Echvi_0722 0.84 +0.6 814,108 - +0.5 814,121 + -0.2 814,122 - +1.0 814,122 - +0.5 814,122 - +0.7 814,122 - +0.3 814,126 + +0.5 814,126 + +1.6 814,126 + -1.2 814,320 + Echvi_0723 0.12 -0.3 814,321 - Echvi_0723 0.13 +0.1 814,388 + Echvi_0723 0.27 -0.1 814,389 - Echvi_0723 0.27 -0.9 814,436 + Echvi_0723 0.37 +0.6 814,437 - Echvi_0723 0.37 -1.0 814,509 + Echvi_0723 0.52 -1.0 814,652 + Echvi_0723 0.82 -0.1 814,663 + Echvi_0723 0.85 -1.1 814,672 - Echvi_0723 0.87 -1.0 814,715 - -1.1 814,735 - -0.6 814,755 - +0.2 814,755 - +0.1 814,771 - -0.1 814,771 - -0.2 814,890 + Echvi_0724 0.23 +1.3 814,992 - Echvi_0724 0.42 -0.0 814,992 - Echvi_0724 0.42 -0.2 814,998 + Echvi_0724 0.43 +0.4 815,027 + Echvi_0724 0.49 +0.6 815,183 + Echvi_0724 0.77 +2.3 815,183 + Echvi_0724 0.77 +0.9 815,184 - Echvi_0724 0.78 -0.7 815,184 - Echvi_0724 0.78 +0.5 815,285 - +0.8 815,333 + -0.6 815,334 - -0.6 815,406 - Echvi_0725 0.24 +0.6 815,701 + +0.2 815,704 + +0.5 815,704 + +1.4 815,704 + +0.8 815,705 - -0.4
Or see this region's nucleotide sequence