Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0632 and Echvi_0633 overlap by 8 nucleotides Echvi_0633 and Echvi_0634 overlap by 50 nucleotides Echvi_0634 and Echvi_0635 are separated by 92 nucleotides Echvi_0635 and Echvi_0636 overlap by 11 nucleotides Echvi_0636 and Echvi_0637 are separated by 24 nucleotides
Echvi_0632: Echvi_0632 - Parvulin-like peptidyl-prolyl isomerase, at 715,078 to 716,484
_0632
Echvi_0633: Echvi_0633 - hypothetical protein, at 716,477 to 717,400
_0633
Echvi_0634: Echvi_0634 - Parvulin-like peptidyl-prolyl isomerase, at 717,351 to 719,366
_0634
Echvi_0635: Echvi_0635 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 719,459 to 719,887
_0635
Echvi_0636: Echvi_0636 - anti-anti-sigma factor, at 719,877 to 720,221
_0636
Echvi_0637: Echvi_0637 - Serine phosphatase RsbU, regulator of sigma subunit, at 720,246 to 722,312
_0637
Position (kb) 717
718
719
720 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 716.552 kb on + strand at 716.552 kb on + strand at 716.563 kb on + strand at 716.578 kb on + strand, within Echvi_0633 at 716.652 kb on + strand, within Echvi_0633 at 716.653 kb on - strand, within Echvi_0633 at 716.656 kb on + strand, within Echvi_0633 at 716.656 kb on + strand, within Echvi_0633 at 716.656 kb on + strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.658 kb on + strand, within Echvi_0633 at 716.658 kb on + strand, within Echvi_0633 at 716.659 kb on - strand, within Echvi_0633 at 716.714 kb on - strand, within Echvi_0633 at 716.787 kb on + strand, within Echvi_0633 at 716.873 kb on - strand, within Echvi_0633 at 716.941 kb on + strand, within Echvi_0633 at 716.958 kb on + strand, within Echvi_0633 at 716.959 kb on - strand, within Echvi_0633 at 717.010 kb on + strand, within Echvi_0633 at 717.013 kb on - strand, within Echvi_0633 at 717.013 kb on - strand, within Echvi_0633 at 717.024 kb on + strand, within Echvi_0633 at 717.025 kb on - strand, within Echvi_0633 at 717.045 kb on + strand, within Echvi_0633 at 717.046 kb on - strand, within Echvi_0633 at 717.049 kb on + strand, within Echvi_0633 at 717.049 kb on + strand, within Echvi_0633 at 717.049 kb on + strand, within Echvi_0633 at 717.050 kb on - strand, within Echvi_0633 at 717.050 kb on - strand, within Echvi_0633 at 717.050 kb on - strand, within Echvi_0633 at 717.051 kb on + strand, within Echvi_0633 at 717.051 kb on + strand, within Echvi_0633 at 717.059 kb on + strand, within Echvi_0633 at 717.118 kb on + strand, within Echvi_0633 at 717.118 kb on + strand, within Echvi_0633 at 717.118 kb on + strand, within Echvi_0633 at 717.119 kb on - strand, within Echvi_0633 at 717.169 kb on + strand, within Echvi_0633 at 717.225 kb on + strand, within Echvi_0633 at 717.225 kb on + strand, within Echvi_0633 at 717.226 kb on - strand, within Echvi_0633 at 717.226 kb on - strand, within Echvi_0633 at 717.307 kb on + strand, within Echvi_0633 at 717.307 kb on + strand, within Echvi_0633 at 717.308 kb on - strand at 717.338 kb on + strand at 717.339 kb on - strand at 717.339 kb on - strand at 717.339 kb on - strand at 717.352 kb on + strand at 717.353 kb on - strand at 717.372 kb on - strand at 717.430 kb on - strand at 717.430 kb on - strand at 717.539 kb on + strand at 717.539 kb on + strand at 717.540 kb on - strand at 717.540 kb on - strand at 717.540 kb on - strand at 717.540 kb on - strand at 717.541 kb on + strand at 717.542 kb on - strand at 717.542 kb on - strand at 717.542 kb on - strand at 717.542 kb on - strand at 717.560 kb on + strand, within Echvi_0634 at 717.609 kb on - strand, within Echvi_0634 at 717.625 kb on - strand, within Echvi_0634 at 717.649 kb on - strand, within Echvi_0634 at 717.730 kb on - strand, within Echvi_0634 at 717.756 kb on + strand, within Echvi_0634 at 717.796 kb on + strand, within Echvi_0634 at 717.797 kb on - strand, within Echvi_0634 at 717.797 kb on - strand, within Echvi_0634 at 718.029 kb on + strand, within Echvi_0634 at 718.030 kb on - strand, within Echvi_0634 at 718.098 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.130 kb on + strand, within Echvi_0634 at 718.130 kb on + strand, within Echvi_0634 at 718.131 kb on - strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.133 kb on - strand, within Echvi_0634 at 718.137 kb on - strand, within Echvi_0634 at 718.137 kb on - strand, within Echvi_0634 at 718.151 kb on + strand, within Echvi_0634 at 718.152 kb on - strand, within Echvi_0634 at 718.152 kb on - strand, within Echvi_0634 at 718.152 kb on - strand, within Echvi_0634 at 718.205 kb on + strand, within Echvi_0634 at 718.259 kb on + strand, within Echvi_0634 at 718.259 kb on + strand, within Echvi_0634 at 718.319 kb on - strand, within Echvi_0634 at 718.366 kb on + strand, within Echvi_0634 at 718.493 kb on + strand, within Echvi_0634 at 718.507 kb on - strand, within Echvi_0634 at 718.533 kb on - strand, within Echvi_0634 at 718.533 kb on - strand, within Echvi_0634 at 718.555 kb on + strand, within Echvi_0634 at 718.555 kb on + strand, within Echvi_0634 at 718.555 kb on + strand, within Echvi_0634 at 718.556 kb on - strand, within Echvi_0634 at 718.735 kb on + strand, within Echvi_0634 at 718.736 kb on - strand, within Echvi_0634 at 718.756 kb on + strand, within Echvi_0634 at 718.757 kb on - strand, within Echvi_0634 at 718.796 kb on + strand, within Echvi_0634 at 718.797 kb on - strand, within Echvi_0634 at 718.825 kb on + strand, within Echvi_0634 at 718.826 kb on - strand, within Echvi_0634 at 718.845 kb on - strand, within Echvi_0634 at 718.946 kb on + strand, within Echvi_0634 at 718.946 kb on + strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.981 kb on + strand, within Echvi_0634 at 718.982 kb on - strand, within Echvi_0634 at 719.025 kb on - strand, within Echvi_0634 at 719.026 kb on + strand, within Echvi_0634 at 719.038 kb on - strand, within Echvi_0634 at 719.123 kb on + strand, within Echvi_0634 at 719.123 kb on + strand, within Echvi_0634 at 719.125 kb on + strand, within Echvi_0634 at 719.125 kb on + strand, within Echvi_0634 at 719.130 kb on + strand, within Echvi_0634 at 719.220 kb on - strand at 719.220 kb on - strand at 719.264 kb on - strand at 719.281 kb on - strand at 719.328 kb on + strand at 719.329 kb on - strand at 719.353 kb on + strand at 719.353 kb on + strand at 719.353 kb on + strand at 719.354 kb on - strand at 719.357 kb on + strand at 719.369 kb on + strand at 719.369 kb on + strand at 719.369 kb on + strand at 719.373 kb on + strand at 719.374 kb on - strand at 719.374 kb on - strand at 719.374 kb on - strand at 719.374 kb on - strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.440 kb on - strand at 719.440 kb on - strand at 719.440 kb on - strand at 719.453 kb on + strand at 719.873 kb on + strand at 719.873 kb on + strand at 719.912 kb on + strand, within Echvi_0636 at 719.912 kb on + strand, within Echvi_0636 at 719.958 kb on + strand at 719.959 kb on - strand, within Echvi_0636 at 719.967 kb on + strand, within Echvi_0636 at 719.967 kb on + strand, within Echvi_0636 at 719.968 kb on - strand, within Echvi_0636 at 720.028 kb on + strand, within Echvi_0636 at 720.035 kb on + strand, within Echvi_0636 at 720.036 kb on - strand, within Echvi_0636 at 720.045 kb on + strand, within Echvi_0636 at 720.046 kb on - strand, within Echvi_0636 at 720.062 kb on + strand, within Echvi_0636 at 720.063 kb on - strand, within Echvi_0636 at 720.069 kb on + strand, within Echvi_0636 at 720.069 kb on + strand, within Echvi_0636 at 720.070 kb on - strand, within Echvi_0636 at 720.124 kb on - strand, within Echvi_0636 at 720.124 kb on - strand, within Echvi_0636 at 720.149 kb on + strand, within Echvi_0636 at 720.149 kb on + strand, within Echvi_0636 at 720.185 kb on + strand, within Echvi_0636 at 720.185 kb on + strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.209 kb on + strand at 720.210 kb on - strand at 720.221 kb on + strand at 720.221 kb on + strand at 720.221 kb on + strand at 720.222 kb on - strand at 720.222 kb on - strand at 720.222 kb on - strand at 720.229 kb on + strand at 720.230 kb on - strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.283 kb on + strand at 720.284 kb on - strand at 720.284 kb on - strand at 720.336 kb on + strand at 720.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 716,552 + +0.1 716,552 + +0.7 716,563 + +0.1 716,578 + Echvi_0633 0.11 +0.7 716,652 + Echvi_0633 0.19 -0.2 716,653 - Echvi_0633 0.19 +0.2 716,656 + Echvi_0633 0.19 -0.0 716,656 + Echvi_0633 0.19 -0.5 716,656 + Echvi_0633 0.19 -0.3 716,657 - Echvi_0633 0.19 -0.8 716,657 - Echvi_0633 0.19 +0.2 716,657 - Echvi_0633 0.19 +0.4 716,657 - Echvi_0633 0.19 -0.8 716,657 - Echvi_0633 0.19 -1.9 716,658 + Echvi_0633 0.20 -0.0 716,658 + Echvi_0633 0.20 +0.6 716,659 - Echvi_0633 0.20 -1.2 716,714 - Echvi_0633 0.26 -0.1 716,787 + Echvi_0633 0.34 -0.5 716,873 - Echvi_0633 0.43 +0.4 716,941 + Echvi_0633 0.50 -0.5 716,958 + Echvi_0633 0.52 +0.1 716,959 - Echvi_0633 0.52 -0.7 717,010 + Echvi_0633 0.58 +0.4 717,013 - Echvi_0633 0.58 -0.9 717,013 - Echvi_0633 0.58 -1.2 717,024 + Echvi_0633 0.59 +0.1 717,025 - Echvi_0633 0.59 -0.9 717,045 + Echvi_0633 0.61 -0.5 717,046 - Echvi_0633 0.62 -0.5 717,049 + Echvi_0633 0.62 -0.5 717,049 + Echvi_0633 0.62 +0.3 717,049 + Echvi_0633 0.62 -0.2 717,050 - Echvi_0633 0.62 -1.4 717,050 - Echvi_0633 0.62 -0.1 717,050 - Echvi_0633 0.62 -1.0 717,051 + Echvi_0633 0.62 +0.3 717,051 + Echvi_0633 0.62 -1.2 717,059 + Echvi_0633 0.63 -1.1 717,118 + Echvi_0633 0.69 +0.7 717,118 + Echvi_0633 0.69 -0.4 717,118 + Echvi_0633 0.69 +0.2 717,119 - Echvi_0633 0.69 -0.2 717,169 + Echvi_0633 0.75 +0.2 717,225 + Echvi_0633 0.81 -0.4 717,225 + Echvi_0633 0.81 +0.5 717,226 - Echvi_0633 0.81 +0.3 717,226 - Echvi_0633 0.81 +0.1 717,307 + Echvi_0633 0.90 +0.6 717,307 + Echvi_0633 0.90 -0.2 717,308 - -1.1 717,338 + +0.2 717,339 - -0.7 717,339 - -1.0 717,339 - +0.7 717,352 + +0.8 717,353 - +0.4 717,372 - +1.0 717,430 - -1.9 717,430 - +0.6 717,539 + -0.2 717,539 + -1.3 717,540 - -1.0 717,540 - -1.1 717,540 - +1.4 717,540 - +0.8 717,541 + +1.5 717,542 - -1.2 717,542 - -0.5 717,542 - -2.1 717,542 - -1.1 717,560 + Echvi_0634 0.10 -0.5 717,609 - Echvi_0634 0.13 +0.1 717,625 - Echvi_0634 0.14 -0.6 717,649 - Echvi_0634 0.15 +0.7 717,730 - Echvi_0634 0.19 -0.5 717,756 + Echvi_0634 0.20 -2.3 717,796 + Echvi_0634 0.22 -0.2 717,797 - Echvi_0634 0.22 +0.3 717,797 - Echvi_0634 0.22 +0.1 718,029 + Echvi_0634 0.34 +0.2 718,030 - Echvi_0634 0.34 +0.7 718,098 - Echvi_0634 0.37 +1.2 718,107 - Echvi_0634 0.38 -0.6 718,107 - Echvi_0634 0.38 -0.8 718,107 - Echvi_0634 0.38 -2.0 718,107 - Echvi_0634 0.38 -0.2 718,107 - Echvi_0634 0.38 -1.6 718,107 - Echvi_0634 0.38 -0.6 718,130 + Echvi_0634 0.39 -1.0 718,130 + Echvi_0634 0.39 -1.2 718,131 - Echvi_0634 0.39 -0.8 718,132 + Echvi_0634 0.39 -1.0 718,132 + Echvi_0634 0.39 +0.2 718,132 + Echvi_0634 0.39 -0.0 718,132 + Echvi_0634 0.39 -0.9 718,133 - Echvi_0634 0.39 +0.8 718,137 - Echvi_0634 0.39 -0.2 718,137 - Echvi_0634 0.39 -1.3 718,151 + Echvi_0634 0.40 +0.4 718,152 - Echvi_0634 0.40 -1.0 718,152 - Echvi_0634 0.40 -0.2 718,152 - Echvi_0634 0.40 +0.4 718,205 + Echvi_0634 0.42 +0.1 718,259 + Echvi_0634 0.45 -2.6 718,259 + Echvi_0634 0.45 +0.0 718,319 - Echvi_0634 0.48 -1.5 718,366 + Echvi_0634 0.50 -0.3 718,493 + Echvi_0634 0.57 -0.7 718,507 - Echvi_0634 0.57 -1.6 718,533 - Echvi_0634 0.59 +0.1 718,533 - Echvi_0634 0.59 -2.2 718,555 + Echvi_0634 0.60 -0.7 718,555 + Echvi_0634 0.60 +0.0 718,555 + Echvi_0634 0.60 -1.1 718,556 - Echvi_0634 0.60 -0.2 718,735 + Echvi_0634 0.69 -1.4 718,736 - Echvi_0634 0.69 +0.5 718,756 + Echvi_0634 0.70 -0.9 718,757 - Echvi_0634 0.70 -1.4 718,796 + Echvi_0634 0.72 -0.3 718,797 - Echvi_0634 0.72 -0.8 718,825 + Echvi_0634 0.73 -0.9 718,826 - Echvi_0634 0.73 -0.1 718,845 - Echvi_0634 0.74 -0.5 718,946 + Echvi_0634 0.79 -0.2 718,946 + Echvi_0634 0.79 -0.9 718,947 - Echvi_0634 0.79 -1.5 718,947 - Echvi_0634 0.79 -0.8 718,947 - Echvi_0634 0.79 -0.2 718,947 - Echvi_0634 0.79 +0.3 718,947 - Echvi_0634 0.79 +0.1 718,981 + Echvi_0634 0.81 -1.3 718,982 - Echvi_0634 0.81 +0.4 719,025 - Echvi_0634 0.83 -0.1 719,026 + Echvi_0634 0.83 -1.2 719,038 - Echvi_0634 0.84 -0.3 719,123 + Echvi_0634 0.88 -2.7 719,123 + Echvi_0634 0.88 -0.9 719,125 + Echvi_0634 0.88 -1.6 719,125 + Echvi_0634 0.88 -1.6 719,130 + Echvi_0634 0.88 +0.3 719,220 - -1.3 719,220 - +0.1 719,264 - +0.1 719,281 - -0.4 719,328 + -2.7 719,329 - -0.2 719,353 + +0.0 719,353 + -0.4 719,353 + -0.6 719,354 - -0.7 719,357 + -1.1 719,369 + -0.5 719,369 + -0.2 719,369 + -0.8 719,373 + +0.5 719,374 - -0.5 719,374 - -0.0 719,374 - +1.1 719,374 - +0.2 719,439 + -0.2 719,439 + -0.8 719,439 + -0.5 719,439 + -0.3 719,439 + -1.5 719,439 + +0.1 719,439 + +1.1 719,439 + -0.8 719,440 - +0.1 719,440 - -0.4 719,440 - -0.0 719,453 + -1.4 719,873 + +0.2 719,873 + +0.6 719,912 + Echvi_0636 0.10 -0.2 719,912 + Echvi_0636 0.10 -0.1 719,958 + +1.1 719,959 - Echvi_0636 0.24 -1.8 719,967 + Echvi_0636 0.26 -2.6 719,967 + Echvi_0636 0.26 -1.6 719,968 - Echvi_0636 0.26 -2.7 720,028 + Echvi_0636 0.44 -1.0 720,035 + Echvi_0636 0.46 -1.8 720,036 - Echvi_0636 0.46 -0.6 720,045 + Echvi_0636 0.49 -2.0 720,046 - Echvi_0636 0.49 -0.6 720,062 + Echvi_0636 0.54 -1.1 720,063 - Echvi_0636 0.54 -1.9 720,069 + Echvi_0636 0.56 -1.8 720,069 + Echvi_0636 0.56 -0.5 720,070 - Echvi_0636 0.56 -1.9 720,124 - Echvi_0636 0.72 +0.1 720,124 - Echvi_0636 0.72 -0.6 720,149 + Echvi_0636 0.79 -0.3 720,149 + Echvi_0636 0.79 -2.2 720,185 + Echvi_0636 0.89 -1.3 720,185 + Echvi_0636 0.89 -2.0 720,186 - Echvi_0636 0.90 -0.6 720,186 - Echvi_0636 0.90 -2.1 720,186 - Echvi_0636 0.90 -2.4 720,186 - Echvi_0636 0.90 -1.2 720,209 + -1.0 720,210 - -0.3 720,221 + +0.0 720,221 + -3.5 720,221 + -1.2 720,222 - +1.8 720,222 - +0.1 720,222 - -1.2 720,229 + -0.5 720,230 - -2.2 720,231 + -0.4 720,231 + -0.9 720,231 + -1.8 720,231 + -0.1 720,231 + -0.7 720,231 + -1.4 720,283 + -0.5 720,284 - -1.0 720,284 - -0.3 720,336 + -1.6 720,337 - -1.5
Or see this region's nucleotide sequence