Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0284 and Echvi_0285 are separated by 6 nucleotides Echvi_0285 and Echvi_0286 are separated by 17 nucleotides Echvi_0286 and Echvi_0287 are separated by 29 nucleotides Echvi_0287 and Echvi_0288 are separated by 134 nucleotides
Echvi_0284: Echvi_0284 - nicotinate (nicotinamide) nucleotide adenylyltransferase, at 296,150 to 296,716
_0284
Echvi_0285: Echvi_0285 - guanylate kinase, at 296,723 to 297,295
_0285
Echvi_0286: Echvi_0286 - hypothetical protein, at 297,313 to 297,585
_0286
Echvi_0287: Echvi_0287 - RNA polymerase sigma factor, sigma-70 family, at 297,615 to 298,205
_0287
Echvi_0288: Echvi_0288 - Lauroyl/myristoyl acyltransferase, at 298,340 to 299,176
_0288
Position (kb) 297
298
299 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 296.725 kb on - strand at 296.725 kb on - strand at 296.725 kb on - strand at 297.457 kb on - strand, within Echvi_0286 at 297.635 kb on - strand at 297.775 kb on - strand, within Echvi_0287 at 297.775 kb on - strand, within Echvi_0287 at 297.823 kb on - strand, within Echvi_0287 at 297.835 kb on - strand, within Echvi_0287 at 297.873 kb on - strand, within Echvi_0287 at 297.876 kb on - strand, within Echvi_0287 at 297.876 kb on - strand, within Echvi_0287 at 298.055 kb on - strand, within Echvi_0287 at 298.055 kb on - strand, within Echvi_0287 at 298.140 kb on - strand, within Echvi_0287 at 298.236 kb on - strand at 298.321 kb on - strand at 298.321 kb on - strand at 298.385 kb on + strand at 298.386 kb on - strand at 298.387 kb on + strand at 298.387 kb on + strand at 298.387 kb on + strand at 298.555 kb on + strand, within Echvi_0288 at 298.617 kb on + strand, within Echvi_0288 at 298.660 kb on + strand, within Echvi_0288 at 298.660 kb on + strand, within Echvi_0288 at 298.660 kb on + strand, within Echvi_0288 at 298.736 kb on + strand, within Echvi_0288 at 298.737 kb on - strand, within Echvi_0288 at 298.867 kb on - strand, within Echvi_0288 at 298.990 kb on + strand, within Echvi_0288 at 299.028 kb on - strand, within Echvi_0288 at 299.028 kb on - strand, within Echvi_0288 at 299.029 kb on + strand, within Echvi_0288 at 299.081 kb on - strand, within Echvi_0288 at 299.087 kb on - strand, within Echvi_0288 at 299.087 kb on - strand, within Echvi_0288 at 299.110 kb on - strand at 299.141 kb on + strand at 299.141 kb on + strand at 299.177 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 296,725 - -0.9 296,725 - +0.7 296,725 - -0.3 297,457 - Echvi_0286 0.53 -0.8 297,635 - -1.3 297,775 - Echvi_0287 0.27 -1.1 297,775 - Echvi_0287 0.27 +0.1 297,823 - Echvi_0287 0.35 -0.9 297,835 - Echvi_0287 0.37 -2.5 297,873 - Echvi_0287 0.44 -2.5 297,876 - Echvi_0287 0.44 -3.3 297,876 - Echvi_0287 0.44 -3.2 298,055 - Echvi_0287 0.74 -1.7 298,055 - Echvi_0287 0.74 -1.6 298,140 - Echvi_0287 0.89 -3.0 298,236 - +0.4 298,321 - -1.3 298,321 - -0.4 298,385 + +0.4 298,386 - +0.5 298,387 + -0.3 298,387 + +0.4 298,387 + -0.5 298,555 + Echvi_0288 0.26 -1.2 298,617 + Echvi_0288 0.33 -0.6 298,660 + Echvi_0288 0.38 -1.4 298,660 + Echvi_0288 0.38 +0.5 298,660 + Echvi_0288 0.38 -0.9 298,736 + Echvi_0288 0.47 +0.0 298,737 - Echvi_0288 0.47 +2.7 298,867 - Echvi_0288 0.63 -0.6 298,990 + Echvi_0288 0.78 +0.5 299,028 - Echvi_0288 0.82 -2.0 299,028 - Echvi_0288 0.82 -0.7 299,029 + Echvi_0288 0.82 -0.2 299,081 - Echvi_0288 0.89 +1.7 299,087 - Echvi_0288 0.89 +1.4 299,087 - Echvi_0288 0.89 -1.9 299,110 - -0.2 299,141 + +0.3 299,141 + -1.5 299,177 + -0.5
Or see this region's nucleotide sequence