Experiment: m.b. Cobalt chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0200 and Echvi_0201 are separated by 432 nucleotides Echvi_0201 and Echvi_0202 are separated by 110 nucleotides
Echvi_0200: Echvi_0200 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 215,464 to 217,878
_0200
Echvi_0201: Echvi_0201 - alanine dehydrogenase, at 218,311 to 219,429
_0201
Echvi_0202: Echvi_0202 - histidine ammonia-lyase, at 219,540 to 221,066
_0202
Position (kb) 218
219
220 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 217.879 kb on - strand at 217.879 kb on - strand at 217.879 kb on - strand at 217.951 kb on + strand at 218.237 kb on + strand at 218.238 kb on - strand at 218.270 kb on + strand at 218.272 kb on + strand at 218.272 kb on + strand at 218.272 kb on + strand at 218.272 kb on + strand at 218.283 kb on + strand at 218.283 kb on + strand at 218.283 kb on + strand at 218.287 kb on + strand at 218.287 kb on + strand at 218.287 kb on + strand at 218.287 kb on + strand at 218.290 kb on + strand at 218.408 kb on + strand at 218.409 kb on - strand at 218.409 kb on - strand at 218.409 kb on - strand at 218.410 kb on + strand at 218.459 kb on - strand, within Echvi_0201 at 218.504 kb on - strand, within Echvi_0201 at 218.555 kb on - strand, within Echvi_0201 at 218.565 kb on - strand, within Echvi_0201 at 218.590 kb on + strand, within Echvi_0201 at 218.659 kb on + strand, within Echvi_0201 at 218.697 kb on - strand, within Echvi_0201 at 218.707 kb on - strand, within Echvi_0201 at 218.707 kb on - strand, within Echvi_0201 at 218.718 kb on - strand, within Echvi_0201 at 218.847 kb on - strand, within Echvi_0201 at 218.847 kb on - strand, within Echvi_0201 at 218.847 kb on - strand, within Echvi_0201 at 218.954 kb on + strand, within Echvi_0201 at 218.954 kb on + strand, within Echvi_0201 at 218.978 kb on - strand, within Echvi_0201 at 219.191 kb on + strand, within Echvi_0201 at 219.196 kb on + strand, within Echvi_0201 at 219.333 kb on - strand at 219.345 kb on - strand at 219.347 kb on + strand at 219.453 kb on - strand at 219.453 kb on - strand at 219.520 kb on + strand at 219.567 kb on - strand at 219.647 kb on - strand at 219.648 kb on + strand at 219.648 kb on + strand at 219.729 kb on + strand, within Echvi_0202 at 219.729 kb on + strand, within Echvi_0202 at 219.730 kb on - strand, within Echvi_0202 at 219.730 kb on - strand, within Echvi_0202 at 219.730 kb on - strand, within Echvi_0202 at 219.891 kb on - strand, within Echvi_0202 at 219.892 kb on + strand, within Echvi_0202 at 219.893 kb on - strand, within Echvi_0202 at 219.993 kb on + strand, within Echvi_0202 at 219.994 kb on - strand, within Echvi_0202 at 219.994 kb on - strand, within Echvi_0202 at 219.994 kb on - strand, within Echvi_0202 at 219.995 kb on + strand, within Echvi_0202 at 220.163 kb on + strand, within Echvi_0202 at 220.284 kb on - strand, within Echvi_0202 at 220.288 kb on - strand, within Echvi_0202 at 220.320 kb on - strand, within Echvi_0202 at 220.320 kb on - strand, within Echvi_0202 at 220.338 kb on + strand, within Echvi_0202 at 220.416 kb on - strand, within Echvi_0202
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.8 mM remove 217,879 - +0.2 217,879 - -2.0 217,879 - +0.2 217,951 + +0.4 218,237 + +0.9 218,238 - +0.7 218,270 + +0.8 218,272 + -0.1 218,272 + -1.1 218,272 + -0.8 218,272 + +0.5 218,283 + +0.1 218,283 + +0.1 218,283 + +0.8 218,287 + +0.4 218,287 + -0.3 218,287 + -0.8 218,287 + -0.9 218,290 + -0.1 218,408 + +0.7 218,409 - +0.7 218,409 - -2.0 218,409 - -0.8 218,410 + -1.0 218,459 - Echvi_0201 0.13 -0.1 218,504 - Echvi_0201 0.17 +3.2 218,555 - Echvi_0201 0.22 -1.4 218,565 - Echvi_0201 0.23 -1.7 218,590 + Echvi_0201 0.25 +0.9 218,659 + Echvi_0201 0.31 -0.4 218,697 - Echvi_0201 0.34 -1.0 218,707 - Echvi_0201 0.35 +0.3 218,707 - Echvi_0201 0.35 -0.2 218,718 - Echvi_0201 0.36 -1.1 218,847 - Echvi_0201 0.48 -0.7 218,847 - Echvi_0201 0.48 -0.8 218,847 - Echvi_0201 0.48 +0.0 218,954 + Echvi_0201 0.57 +0.6 218,954 + Echvi_0201 0.57 -0.8 218,978 - Echvi_0201 0.60 -0.9 219,191 + Echvi_0201 0.79 +0.7 219,196 + Echvi_0201 0.79 -0.1 219,333 - +0.2 219,345 - -1.1 219,347 + -1.1 219,453 - +0.2 219,453 - -0.2 219,520 + -0.4 219,567 - +1.3 219,647 - +0.1 219,648 + -0.7 219,648 + -0.9 219,729 + Echvi_0202 0.12 +0.4 219,729 + Echvi_0202 0.12 +0.7 219,730 - Echvi_0202 0.12 -0.8 219,730 - Echvi_0202 0.12 -1.3 219,730 - Echvi_0202 0.12 -0.7 219,891 - Echvi_0202 0.23 +1.0 219,892 + Echvi_0202 0.23 -0.4 219,893 - Echvi_0202 0.23 +0.2 219,993 + Echvi_0202 0.30 +0.1 219,994 - Echvi_0202 0.30 +1.1 219,994 - Echvi_0202 0.30 +0.9 219,994 - Echvi_0202 0.30 +0.8 219,995 + Echvi_0202 0.30 +0.1 220,163 + Echvi_0202 0.41 -0.6 220,284 - Echvi_0202 0.49 +1.7 220,288 - Echvi_0202 0.49 +0.9 220,320 - Echvi_0202 0.51 +0.0 220,320 - Echvi_0202 0.51 -0.1 220,338 + Echvi_0202 0.52 +0.0 220,416 - Echvi_0202 0.57 -0.3
Or see this region's nucleotide sequence