Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03761

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,929,969	+		CCNA_03759	0.66	-0.7
3,929,969	+		CCNA_03759	0.66	+0.1
3,929,977	-		CCNA_03759	0.67	+1.1
3,929,977	-		CCNA_03759	0.67	-1.5
3,929,982	-		CCNA_03759	0.68	-0.0
3,929,993	+		CCNA_03759	0.69	-0.0
3,929,993	+		CCNA_03759	0.69	-2.2
3,930,006	-		CCNA_03759	0.70	+0.3
3,930,006	-		CCNA_03759	0.70	+0.5
3,930,044	-		CCNA_03759	0.74	+0.1
3,930,059	+		CCNA_03759	0.75	-0.2
3,930,093	+		CCNA_03759	0.79	-1.4
3,930,093	+		CCNA_03759	0.79	+0.2
3,930,106	-		CCNA_03759	0.80	-0.2
3,930,106	-		CCNA_03759	0.80	-0.3
3,930,155	+		CCNA_03759	0.85	+0.1
3,930,163	-		CCNA_03759	0.85	+0.1
3,930,168	-		CCNA_03759	0.86	+0.6
3,930,190	+		CCNA_03759	0.88	-0.1
3,930,191	+		CCNA_03759	0.88	-0.3
3,930,196	+		CCNA_03759	0.89	-0.1
3,930,196	+		CCNA_03759	0.89	+0.3
3,930,196	+		CCNA_03759	0.89	-0.7
3,930,204	-		CCNA_03759	0.89	+0.0
3,930,213	+				-0.1
3,930,228	+				+0.2
3,930,236	-				-0.4
3,930,236	-				-0.3
3,930,251	+				-0.5
3,930,257	-				+0.1
3,930,259	-				+0.9
3,930,296	-				+0.3
3,930,298	+				-1.0
3,930,298	+				-0.3
3,930,298	+				+0.5
3,930,306	-				-0.0
3,930,306	-				+0.2
3,930,306	-				-0.0
3,930,344	+				+0.6
3,930,377	+				+0.2
3,930,433	+				+0.4
3,930,434	+				+0.4
3,930,442	-				-0.4
3,930,509	+		CCNA_03760	0.12	-0.5
3,930,509	+		CCNA_03760	0.12	+0.5
3,930,510	+		CCNA_03760	0.12	+1.0
3,930,517	-		CCNA_03760	0.13	+0.2
3,930,524	-		CCNA_03760	0.15	-0.7
3,930,537	-		CCNA_03760	0.17	+0.2
3,930,560	+		CCNA_03760	0.22	-0.2
3,930,560	+		CCNA_03760	0.22	-0.8
3,930,560	+		CCNA_03760	0.22	-0.1
3,930,560	+		CCNA_03760	0.22	+0.1
3,930,568	-		CCNA_03760	0.24	-0.3
3,930,634	-		CCNA_03760	0.37	-0.5
3,930,635	-		CCNA_03760	0.37	-0.6
3,930,647	+		CCNA_03760	0.39	-0.1
3,930,683	-		CCNA_03760	0.47	+2.1
3,930,699	+		CCNA_03760	0.50	+0.4
3,930,707	-		CCNA_03760	0.51	+0.6
3,930,708	-		CCNA_03760	0.51	-0.4
3,930,708	-		CCNA_03760	0.51	-0.1
3,930,717	+		CCNA_03760	0.53	+0.1
3,930,725	-		CCNA_03760	0.55	+0.6
3,930,744	-		CCNA_03760	0.59	+0.6
3,930,769	+		CCNA_03760	0.64	-0.7
3,930,782	-		CCNA_03760	0.66	+0.3
3,930,810	+		CCNA_03760	0.72	-0.1
3,930,818	-		CCNA_03760	0.73	-0.2
3,930,846	+		CCNA_03760	0.79	-0.3
3,930,864	+		CCNA_03760	0.83	+0.1
3,930,944	+				-0.2
3,930,977	+				-0.5
3,930,982	+				-0.5
3,931,012	+		CCNA_03761	0.15	-0.1
3,931,040	-		CCNA_03761	0.22	+0.3
3,931,049	+		CCNA_03761	0.24	-0.6
3,931,119	+		CCNA_03761	0.41	-0.3
3,931,127	-		CCNA_03761	0.43	-0.3
3,931,136	+		CCNA_03761	0.45	-0.2
3,931,139	-		CCNA_03761	0.46	+0.3
3,931,187	+		CCNA_03761	0.57	+0.3
3,931,195	-		CCNA_03761	0.59	+0.3
3,931,207	+		CCNA_03761	0.62	-1.4
3,931,232	+		CCNA_03761	0.68	-0.3
3,931,240	-		CCNA_03761	0.70	+0.6
3,931,240	-		CCNA_03761	0.70	+0.8
3,931,264	-		CCNA_03761	0.75	-0.2
3,931,285	+		CCNA_03761	0.80	+1.5
3,931,347	-				-0.6
3,931,347	-				+0.1
3,931,347	-				+0.0
3,931,361	+				-0.6
3,931,361	+				-0.3
3,931,361	+				+0.2
3,931,369	-				+0.6
3,931,369	-				-0.3
3,931,377	-				-0.2
3,931,432	+				-0.1
3,931,472	+				-0.2
3,931,480	-				+0.2
3,931,520	-				-1.3
3,931,532	-				-0.4
3,931,535	-				-0.3
3,931,572	+				+1.0
3,931,593	+		CCNA_03762	0.11	+0.2
3,931,593	+		CCNA_03762	0.11	+0.2
3,931,650	-		CCNA_03762	0.69	+0.2
3,931,673	-				-0.6
3,931,675	-				-0.4
3,931,681	-				+1.6
3,931,696	-				-0.1
3,931,711	+				+0.4
3,931,719	-				-0.8
3,931,729	-				-0.2
3,931,812	+				+0.7
3,931,903	-		CCNA_03763	0.15	+0.0
3,931,918	+		CCNA_03763	0.17	-0.0
3,931,921	-		CCNA_03763	0.17	-0.1
3,931,932	+		CCNA_03763	0.19	+0.6
3,931,989	-		CCNA_03763	0.25	+0.4
3,932,058	+		CCNA_03763	0.32	-0.5
3,932,066	-		CCNA_03763	0.33	+0.4
3,932,107	-		CCNA_03763	0.38	-0.3
3,932,117	-		CCNA_03763	0.39	+0.5
3,932,140	+		CCNA_03763	0.41	-0.3
3,932,140	+		CCNA_03763	0.41	-0.4
3,932,148	-		CCNA_03763	0.42	-0.1
3,932,167	+		CCNA_03763	0.44	+0.0
3,932,167	+		CCNA_03763	0.44	-0.4
3,932,179	+		CCNA_03763	0.46	+0.4
3,932,185	+		CCNA_03763	0.46	-1.7