Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03729

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,896,174	+		CCNA_03727	0.52	-0.3
3,896,202	+		CCNA_03727	0.55	+1.1
3,896,210	-		CCNA_03727	0.56	-0.6
3,896,212	-		CCNA_03727	0.56	+0.0
3,896,225	-		CCNA_03727	0.58	-0.3
3,896,225	-		CCNA_03727	0.58	+0.0
3,896,225	-		CCNA_03727	0.58	+0.4
3,896,233	-		CCNA_03727	0.58	-1.3
3,896,235	-		CCNA_03727	0.59	-0.2
3,896,261	+		CCNA_03727	0.61	+0.5
3,896,261	+		CCNA_03727	0.61	+0.2
3,896,261	+		CCNA_03727	0.61	-0.8
3,896,261	+		CCNA_03727	0.61	-0.0
3,896,261	+		CCNA_03727	0.61	-0.1
3,896,261	+		CCNA_03727	0.61	+0.3
3,896,261	+		CCNA_03727	0.61	-0.0
3,896,261	+		CCNA_03727	0.61	-0.8
3,896,261	+		CCNA_03727	0.61	+0.3
3,896,261	+		CCNA_03727	0.61	+0.1
3,896,269	-		CCNA_03727	0.62	-0.4
3,896,269	-		CCNA_03727	0.62	-0.0
3,896,269	-		CCNA_03727	0.62	+2.1
3,896,269	-		CCNA_03727	0.62	-2.1
3,896,297	+		CCNA_03727	0.65	+0.6
3,896,297	+		CCNA_03727	0.65	-0.6
3,896,297	+		CCNA_03727	0.65	-1.1
3,896,297	+		CCNA_03727	0.65	+0.4
3,896,305	-		CCNA_03727	0.66	-0.4
3,896,305	-		CCNA_03727	0.66	-0.7
3,896,305	-		CCNA_03727	0.66	-0.6
3,896,305	-		CCNA_03727	0.66	+0.4
3,896,327	-		CCNA_03727	0.68	-1.3
3,896,340	+		CCNA_03727	0.69	+1.0
3,896,340	+		CCNA_03727	0.69	+0.4
3,896,348	-		CCNA_03727	0.70	+0.1
3,896,378	+		CCNA_03727	0.73	-0.4
3,896,378	+		CCNA_03727	0.73	-0.0
3,896,378	+		CCNA_03727	0.73	-1.3
3,896,385	+		CCNA_03727	0.74	-0.5
3,896,386	-		CCNA_03727	0.74	-0.2
3,896,416	-		CCNA_03727	0.77	-1.1
3,896,437	-		CCNA_03727	0.79	+0.4
3,896,438	+		CCNA_03727	0.79	-0.3
3,896,443	+		CCNA_03727	0.80	+0.9
3,896,446	-		CCNA_03727	0.80	-1.3
3,896,446	-		CCNA_03727	0.80	+0.4
3,896,481	+		CCNA_03727	0.84	-0.9
3,896,563	+				+0.1
3,896,570	-				+0.0
3,896,577	+				+0.2
3,896,582	+				+0.6
3,896,590	-				+0.7
3,896,590	-				+0.5
3,896,590	-				-0.8
3,896,590	-				-0.3
3,896,590	-				+0.4
3,896,590	-				-1.4
3,896,590	-				+0.7
3,896,667	-				-0.4
3,896,772	+				+0.5
3,896,792	+		CCNA_03728	0.13	+0.5
3,896,792	+		CCNA_03728	0.13	+0.6
3,896,800	-		CCNA_03728	0.16	-0.8
3,896,800	-		CCNA_03728	0.16	+0.2
3,896,845	+		CCNA_03728	0.34	-0.2
3,896,853	-		CCNA_03728	0.37	-1.0
3,896,870	-		CCNA_03728	0.44	-0.2
3,896,872	+		CCNA_03728	0.45	-0.5
3,896,914	+		CCNA_03728	0.62	+0.5
3,896,950	-		CCNA_03728	0.77	+0.3
3,897,011	-				+0.7
3,897,017	-				-0.1
3,897,017	-				+0.3
3,897,021	+				-2.8
3,897,033	+				+0.2
3,897,033	+				-0.1
3,897,033	+				-0.3
3,897,033	+				+0.5
3,897,033	+				+0.4
3,897,033	+				+0.5
3,897,041	-				+0.8
3,897,041	-				+0.2
3,897,041	-				+0.0
3,897,041	-				-2.9
3,897,041	-				+0.2
3,897,041	-				-1.1
3,897,115	+				-0.1
3,897,142	+				+0.0
3,897,157	-				+1.5
3,897,171	-				-0.1
3,897,797	-				-0.2
3,897,807	-				-0.3
3,897,820	-				+1.1
3,897,820	-				-0.5
3,897,943	+				-0.3
3,897,945	+				-0.0
3,897,945	+				-0.7
3,897,953	-				-0.2
3,897,962	+		CCNA_03730	0.10	+0.2
3,898,003	+		CCNA_03730	0.15	+0.7
3,898,034	-		CCNA_03730	0.19	-0.1
3,898,091	+		CCNA_03730	0.25	-0.4
3,898,269	-		CCNA_03730	0.45	-0.2
3,898,278	+		CCNA_03730	0.46	+1.7
3,898,309	+		CCNA_03730	0.50	-1.0
3,898,317	-		CCNA_03730	0.51	-0.0
3,898,330	+		CCNA_03730	0.52	+0.4
3,898,330	+		CCNA_03730	0.52	+1.0
3,898,330	+		CCNA_03730	0.52	+0.5
3,898,330	+		CCNA_03730	0.52	+0.2
3,898,330	+		CCNA_03730	0.52	-1.6
3,898,330	+		CCNA_03730	0.52	-0.1
3,898,330	+		CCNA_03730	0.52	-0.9
3,898,330	+		CCNA_03730	0.52	-0.4
3,898,333	-		CCNA_03730	0.52	+0.2
3,898,338	-		CCNA_03730	0.53	+0.8
3,898,338	-		CCNA_03730	0.53	+1.5
3,898,338	-		CCNA_03730	0.53	-0.4
3,898,338	-		CCNA_03730	0.53	+0.1
3,898,338	-		CCNA_03730	0.53	-0.4
3,898,341	+		CCNA_03730	0.53	-0.3
3,898,367	+		CCNA_03730	0.56	-0.4
3,898,375	-		CCNA_03730	0.57	+0.3
3,898,385	-		CCNA_03730	0.58	-0.7
3,898,402	-		CCNA_03730	0.60	-0.4
3,898,420	-		CCNA_03730	0.62	+0.0
3,898,437	+		CCNA_03730	0.64	-0.5
3,898,445	-		CCNA_03730	0.65	+0.6
3,898,445	-		CCNA_03730	0.65	+1.9
3,898,499	-		CCNA_03730	0.71	-1.9
3,898,499	-		CCNA_03730	0.71	-0.0
3,898,549	+		CCNA_03730	0.77	+0.2
3,898,557	-		CCNA_03730	0.78	+0.0
3,898,566	-		CCNA_03730	0.79	-0.3
3,898,648	-		CCNA_03730	0.88	-0.4
3,898,657	+		CCNA_03730	0.89	+0.1
3,898,661	-		CCNA_03730	0.90	+0.1
3,898,665	-				-0.3
3,898,719	-				+1.2
3,898,772	+				-1.5
3,898,775	-				-0.0
3,898,780	-				+0.2
3,898,780	-				+0.3