Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03280

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,446,507	+		CCNA_03279	0.11	-0.7
3,446,544	+		CCNA_03279	0.16	+0.2
3,446,552	-		CCNA_03279	0.17	+0.9
3,446,552	-		CCNA_03279	0.17	+0.8
3,446,649	+		CCNA_03279	0.28	-2.1
3,446,681	-		CCNA_03279	0.32	+0.6
3,446,683	+		CCNA_03279	0.32	-0.0
3,446,727	+		CCNA_03279	0.38	+1.9
3,446,747	-		CCNA_03279	0.40	+0.6
3,446,757	-		CCNA_03279	0.41	+0.4
3,446,776	+		CCNA_03279	0.44	+0.8
3,446,846	-		CCNA_03279	0.52	+0.2
3,446,888	-		CCNA_03279	0.57	+0.2
3,446,902	-		CCNA_03279	0.59	+0.2
3,446,940	+		CCNA_03279	0.63	-1.1
3,446,973	+		CCNA_03279	0.67	-1.0
3,446,973	+		CCNA_03279	0.67	-0.2
3,447,091	-		CCNA_03279	0.81	+0.2
3,447,096	-		CCNA_03279	0.82	+0.6
3,447,148	-		CCNA_03279	0.88	+0.4
3,447,148	-		CCNA_03279	0.88	+0.7
3,447,148	-		CCNA_03279	0.88	-0.1
3,447,153	-		CCNA_03279	0.89	-1.2
3,447,185	+				-1.2
3,447,188	-				+0.4
3,447,191	+				+0.3
3,447,221	-				-0.1
3,447,278	+				+1.3
3,447,286	-				+0.1
3,447,303	-				+0.1
3,447,320	-				+1.2
3,447,321	-				-0.1
3,447,321	-				+0.2
3,447,324	+				-1.0
3,447,330	-				-0.1
3,447,330	-				-0.4
3,447,336	+				-0.6
3,447,342	-				-0.2
3,447,346	+				-0.7
3,447,356	+				-0.0
3,447,364	-				+0.1
3,447,364	-				+0.3
3,447,366	-				+1.1
3,447,401	-				+0.5
3,447,434	-				+0.4
3,447,436	+				-0.7
3,447,455	+				-0.1
3,447,474	+				-0.0
3,447,484	+				-0.6
3,447,484	+				+0.5
3,447,484	+				+0.4
3,447,484	+				+0.6
3,447,492	-				-1.3
3,447,492	-				+0.2
3,447,492	-				-0.0
3,447,492	-				+0.5
3,447,519	+				-1.3
3,447,519	+				+0.8
3,447,519	+				+1.1
3,447,519	+				-0.1
3,447,519	+				+0.3
3,447,527	-				+0.1
3,447,527	-				+0.4
3,447,527	-				+0.1
3,447,629	+				-1.1
3,447,677	-				+0.5
3,447,709	+				-1.1
3,447,736	-				+0.2
3,447,776	+				-0.2
3,447,809	+				-0.5
3,447,809	+				-0.4
3,447,817	-				+0.1
3,447,863	+		CCNA_03280	0.10	-0.4
3,447,866	-		CCNA_03280	0.11	+0.1
3,447,872	-		CCNA_03280	0.11	-0.7
3,447,896	-		CCNA_03280	0.11	+0.7
3,447,918	+		CCNA_03280	0.12	+1.4
3,447,926	+		CCNA_03280	0.12	-0.6
3,447,926	-		CCNA_03280	0.12	-0.6
3,447,931	-		CCNA_03280	0.12	-0.0
3,447,945	-		CCNA_03280	0.13	+0.2
3,447,971	+		CCNA_03280	0.14	-0.4
3,447,992	+		CCNA_03280	0.14	-0.2
3,448,014	+		CCNA_03280	0.15	-0.8
3,448,028	+		CCNA_03280	0.15	-0.2
3,448,028	+		CCNA_03280	0.15	-2.5
3,448,028	+		CCNA_03280	0.15	-0.4
3,448,036	-		CCNA_03280	0.15	+0.3
3,448,036	-		CCNA_03280	0.15	+0.4
3,448,062	+		CCNA_03280	0.16	-1.2
3,448,070	-		CCNA_03280	0.16	-0.1
3,448,095	+		CCNA_03280	0.17	-0.7
3,448,103	-		CCNA_03280	0.17	+0.6
3,448,103	-		CCNA_03280	0.17	-0.2
3,448,103	-		CCNA_03280	0.17	-1.1
3,448,103	-		CCNA_03280	0.17	-0.5
3,448,213	+		CCNA_03280	0.21	+0.6
3,448,213	+		CCNA_03280	0.21	+0.2
3,448,213	+		CCNA_03280	0.21	+0.5
3,448,221	-		CCNA_03280	0.21	+0.4
3,448,221	-		CCNA_03280	0.21	+0.6
3,448,278	+		CCNA_03280	0.23	+0.6
3,448,395	-		CCNA_03280	0.26	+0.3
3,448,402	-		CCNA_03280	0.26	+0.7
3,448,402	-		CCNA_03280	0.26	+0.3
3,448,434	+		CCNA_03280	0.27	-0.9
3,448,436	+		CCNA_03280	0.27	-0.1
3,448,442	-		CCNA_03280	0.27	+0.4
3,448,511	+		CCNA_03280	0.29	+2.7
3,448,513	+		CCNA_03280	0.29	+1.3
3,448,513	+		CCNA_03280	0.29	+0.3
3,448,521	-		CCNA_03280	0.30	-0.1
3,448,531	-		CCNA_03280	0.30	+0.2
3,448,534	+		CCNA_03280	0.30	+0.8
3,448,534	+		CCNA_03280	0.30	-0.3
3,448,542	-		CCNA_03280	0.30	-0.0
3,448,621	-		CCNA_03280	0.32	+0.3
3,448,632	+		CCNA_03280	0.33	+0.7
3,448,640	-		CCNA_03280	0.33	-0.5
3,448,643	+		CCNA_03280	0.33	+0.1
3,448,648	+		CCNA_03280	0.33	+0.0
3,448,656	-		CCNA_03280	0.34	+0.6
3,448,675	-		CCNA_03280	0.34	+0.2
3,448,675	-		CCNA_03280	0.34	+0.4
3,448,703	+		CCNA_03280	0.35	+0.2
3,448,709	+		CCNA_03280	0.35	-0.1
3,448,724	+		CCNA_03280	0.35	-0.1
3,448,745	+		CCNA_03280	0.36	-1.1
3,448,760	+		CCNA_03280	0.37	+0.7
3,448,775	-		CCNA_03280	0.37	+0.6
3,448,840	-		CCNA_03280	0.39	+0.0
3,448,850	-		CCNA_03280	0.39	+0.4
3,448,851	+		CCNA_03280	0.39	+0.4
3,448,859	-		CCNA_03280	0.39	+1.0
3,448,859	-		CCNA_03280	0.39	-0.1
3,448,866	-		CCNA_03280	0.40	+0.3
3,448,876	+		CCNA_03280	0.40	-0.5
3,448,876	+		CCNA_03280	0.40	+1.4
3,448,876	+		CCNA_03280	0.40	+0.3
3,448,892	-		CCNA_03280	0.40	-0.0
3,448,904	-		CCNA_03280	0.41	+0.7
3,448,930	-		CCNA_03280	0.41	-0.1
3,448,973	+		CCNA_03280	0.43	-0.0
3,449,003	-		CCNA_03280	0.44	+0.2
3,449,005	+		CCNA_03280	0.44	-0.0
3,449,005	+		CCNA_03280	0.44	+0.4
3,449,013	-		CCNA_03280	0.44	-0.2
3,449,028	+		CCNA_03280	0.44	-0.5
3,449,053	-		CCNA_03280	0.45	+0.1
3,449,067	-		CCNA_03280	0.45	-0.2
3,449,067	-		CCNA_03280	0.45	+0.1
3,449,109	+		CCNA_03280	0.47	-0.3
3,449,109	+		CCNA_03280	0.47	-1.1
3,449,117	-		CCNA_03280	0.47	+0.2
3,449,117	-		CCNA_03280	0.47	+0.1
3,449,117	-		CCNA_03280	0.47	-0.2
3,449,126	+		CCNA_03280	0.47	-0.3
3,449,126	+		CCNA_03280	0.47	+0.1
3,449,134	-		CCNA_03280	0.47	+0.5
3,449,158	+		CCNA_03280	0.48	-0.8
3,449,174	+		CCNA_03280	0.49	-0.5
3,449,174	+		CCNA_03280	0.49	+0.9
3,449,174	+		CCNA_03280	0.49	+0.2
3,449,180	-		CCNA_03280	0.49	+0.0
3,449,182	-		CCNA_03280	0.49	+0.7
3,449,182	-		CCNA_03280	0.49	+0.7
3,449,182	-		CCNA_03280	0.49	-0.1
3,449,182	-		CCNA_03280	0.49	+0.0
3,449,182	-		CCNA_03280	0.49	+0.5
3,449,182	-		CCNA_03280	0.49	+0.2
3,449,187	-		CCNA_03280	0.49	+0.3
3,449,213	-		CCNA_03280	0.50	+0.6
3,449,227	-		CCNA_03280	0.50	-0.4
3,449,302	+		CCNA_03280	0.52	-1.2
3,449,302	+		CCNA_03280	0.52	-0.2
3,449,316	-		CCNA_03280	0.53	+0.7
3,449,316	-		CCNA_03280	0.53	+0.2
3,449,358	+		CCNA_03280	0.54	-0.0
3,449,366	-		CCNA_03280	0.54	-0.0
3,449,366	-		CCNA_03280	0.54	+0.4
3,449,368	+		CCNA_03280	0.54	-0.9
3,449,368	+		CCNA_03280	0.54	-0.6
3,449,376	-		CCNA_03280	0.54	+0.2
3,449,458	-		CCNA_03280	0.57	-0.1
3,449,493	+		CCNA_03280	0.58	+0.2
3,449,495	-		CCNA_03280	0.58	-1.6
3,449,498	+		CCNA_03280	0.58	-0.2
3,449,506	-		CCNA_03280	0.58	-0.7
3,449,523	+		CCNA_03280	0.59	-0.6
3,449,525	+		CCNA_03280	0.59	-0.3
3,449,526	-		CCNA_03280	0.59	-0.9
3,449,626	-		CCNA_03280	0.62	-0.5
3,449,634	+		CCNA_03280	0.62	-0.7
3,449,705	+		CCNA_03280	0.64	-1.8
3,449,709	+		CCNA_03280	0.64	-0.3
3,449,714	+		CCNA_03280	0.64	-0.8
3,449,714	+		CCNA_03280	0.64	-0.2
3,449,722	-		CCNA_03280	0.64	+0.1
3,449,723	-		CCNA_03280	0.65	-0.5
3,449,739	+		CCNA_03280	0.65	-0.2
3,449,747	-		CCNA_03280	0.65	-0.1
3,449,757	+		CCNA_03280	0.66	-1.8
3,449,761	-		CCNA_03280	0.66	+0.1
3,449,797	+		CCNA_03280	0.67	+0.2
3,449,804	-		CCNA_03280	0.67	+0.2
3,449,895	-		CCNA_03280	0.70	+0.7
3,449,910	-		CCNA_03280	0.70	+0.0
3,449,959	+		CCNA_03280	0.71	+0.0
3,449,991	+		CCNA_03280	0.72	+1.3
3,450,041	-		CCNA_03280	0.74	+0.2
3,450,041	-		CCNA_03280	0.74	+0.4
3,450,041	-		CCNA_03280	0.74	+0.5
3,450,041	-		CCNA_03280	0.74	+0.4
3,450,046	-		CCNA_03280	0.74	-0.1
3,450,095	+		CCNA_03280	0.75	+0.9
3,450,101	-		CCNA_03280	0.76	+0.9
3,450,103	-		CCNA_03280	0.76	+0.6
3,450,116	-		CCNA_03280	0.76	+1.1
3,450,122	-		CCNA_03280	0.76	+0.0
3,450,131	+		CCNA_03280	0.76	-0.5
3,450,131	+		CCNA_03280	0.76	-0.1
3,450,134	+		CCNA_03280	0.76	-0.6
3,450,139	-		CCNA_03280	0.77	-0.2
3,450,170	+		CCNA_03280	0.78	-0.9
3,450,170	+		CCNA_03280	0.78	+0.2
3,450,178	-		CCNA_03280	0.78	+0.5
3,450,218	-		CCNA_03280	0.79	+0.3
3,450,241	+		CCNA_03280	0.80	-0.8
3,450,256	+		CCNA_03280	0.80	+0.5
3,450,269	+		CCNA_03280	0.80	-0.3
3,450,316	+		CCNA_03280	0.82	-0.9
3,450,330	+		CCNA_03280	0.82	-0.2
3,450,338	-		CCNA_03280	0.82	+0.4
3,450,363	+		CCNA_03280	0.83	-1.5
3,450,363	+		CCNA_03280	0.83	+0.7
3,450,371	-		CCNA_03280	0.83	-0.3
3,450,392	-		CCNA_03280	0.84	-0.5
3,450,401	+		CCNA_03280	0.84	-1.9
3,450,417	-		CCNA_03280	0.85	+0.0
3,450,505	-		CCNA_03280	0.87	+0.1
3,450,648	+				+0.9
3,450,648	+				-0.9
3,450,655	-				-0.3
3,450,683	+				+0.7
3,450,690	+				+0.1
3,450,695	+				-0.5
3,450,738	+				+0.1
3,450,784	+				+0.3
3,450,839	+				+0.7
3,450,969	+				-2.3
3,450,981	+				-0.2
3,450,988	-				-0.2
3,451,056	+				-0.1
3,451,209	-		CCNA_03281	0.25	+0.4
3,451,236	+		CCNA_03281	0.30	+0.0
3,451,292	+		CCNA_03281	0.41	-1.5
3,451,292	+		CCNA_03281	0.41	+1.1
3,451,292	+		CCNA_03281	0.41	+0.1
3,451,300	+		CCNA_03281	0.43	+0.2
3,451,347	-		CCNA_03281	0.52	+0.7
3,451,381	+		CCNA_03281	0.59	+0.1
3,451,441	+		CCNA_03281	0.71	-0.1
3,451,494	+		CCNA_03281	0.82	-0.6
3,451,529	+		CCNA_03281	0.89	-0.5
3,451,529	+		CCNA_03281	0.89	-0.3
3,451,537	-				+0.1
3,451,558	+				+0.3
3,451,591	+				+1.3
3,451,613	+				+0.2
3,451,620	-				-0.5
3,451,639	-				-0.3
3,451,639	-				-0.9
3,451,689	+				+0.2
3,451,692	-				+0.2
3,451,692	-				-0.7
3,451,692	-				+0.3
3,451,731	-				-0.5
3,451,750	+				-0.6
3,451,760	-				+0.1
3,451,762	-				+0.4
3,451,771	+				-1.2
3,451,812	-				-0.5
3,451,835	+				+0.0
3,451,870	+				-0.2
3,451,873	-				+0.8
3,451,890	-		CCNA_03282	0.10	+0.1