Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03256

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,426,172	+		CCNA_03254	0.77	-1.0
3,426,172	+		CCNA_03254	0.77	+0.5
3,426,178	+		CCNA_03254	0.77	+0.9
3,426,178	+		CCNA_03254	0.77	-0.5
3,426,180	-		CCNA_03254	0.77	-0.5
3,426,217	-		CCNA_03254	0.80	+0.1
3,426,222	-		CCNA_03254	0.80	+0.2
3,426,245	-		CCNA_03254	0.82	-0.2
3,426,257	+		CCNA_03254	0.83	+0.1
3,426,270	-		CCNA_03254	0.84	-0.3
3,426,305	+		CCNA_03254	0.87	-0.6
3,426,305	+		CCNA_03254	0.87	-0.1
3,426,313	-		CCNA_03254	0.87	+1.4
3,426,336	-		CCNA_03254	0.89	-0.5
3,426,365	+				-0.2
3,426,365	+				+1.3
3,426,373	-				-0.6
3,426,373	-				-1.6
3,426,415	-				-0.1
3,426,415	-				+0.4
3,426,433	+				+0.2
3,426,436	-				+0.7
3,426,441	-				+1.2
3,426,441	-				-0.5
3,426,451	-				+0.4
3,426,451	-				+0.1
3,426,467	+				+0.6
3,426,483	-				+0.1
3,426,549	-				+0.7
3,426,572	-				-1.7
3,426,584	-				-0.6
3,426,640	+				-0.0
3,426,648	-				-0.4
3,426,659	+		CCNA_03255	0.12	-0.5
3,426,662	-		CCNA_03255	0.12	+0.4
3,426,667	-		CCNA_03255	0.13	-0.0
3,426,669	-		CCNA_03255	0.14	+0.4
3,426,710	+		CCNA_03255	0.23	-0.0
3,426,712	+		CCNA_03255	0.23	+1.7
3,426,735	-		CCNA_03255	0.29	-2.4
3,426,764	-		CCNA_03255	0.35	-0.9
3,426,779	+		CCNA_03255	0.38	-0.8
3,426,779	+		CCNA_03255	0.38	-0.4
3,426,779	+		CCNA_03255	0.38	+0.0
3,426,779	+		CCNA_03255	0.38	+0.4
3,426,787	-		CCNA_03255	0.40	-0.6
3,426,801	+		CCNA_03255	0.43	-0.5
3,426,818	+		CCNA_03255	0.47	-0.4
3,426,841	+		CCNA_03255	0.52	-0.3
3,426,847	+		CCNA_03255	0.54	-0.2
3,426,854	+		CCNA_03255	0.55	-1.1
3,426,871	+		CCNA_03255	0.59	-1.1
3,426,881	-		CCNA_03255	0.61	+1.6
3,426,899	+		CCNA_03255	0.65	-0.6
3,426,899	+		CCNA_03255	0.65	+0.2
3,426,917	-		CCNA_03255	0.69	-0.0
3,426,924	-		CCNA_03255	0.71	-0.7
3,426,939	-		CCNA_03255	0.74	-0.6
3,426,954	-		CCNA_03255	0.78	-0.1
3,426,994	+		CCNA_03255	0.87	-1.0
3,427,022	+				-0.1
3,427,022	+				-0.3
3,427,022	+				+0.7
3,427,030	-				-0.5
3,427,030	-				-0.0
3,427,030	-				-0.4
3,427,030	-				+1.0
3,427,035	-				-1.9
3,427,135	-				-2.3
3,427,145	-				+0.1
3,427,156	+				+0.2
3,427,164	-				+0.4
3,427,179	-				-1.6
3,427,220	-				+1.3
3,427,241	+				+1.1
3,427,335	-		CCNA_03256	0.15	+0.6
3,427,335	-		CCNA_03256	0.15	-1.4
3,427,348	+		CCNA_03256	0.16	+1.9
3,427,378	+		CCNA_03256	0.19	-0.0
3,427,378	+		CCNA_03256	0.19	-0.1
3,427,405	+		CCNA_03256	0.21	+0.5
3,427,418	+		CCNA_03256	0.23	+0.2
3,427,486	-		CCNA_03256	0.29	+0.5
3,427,607	+		CCNA_03256	0.39	+0.7
3,427,623	+		CCNA_03256	0.41	+1.4
3,427,687	-		CCNA_03256	0.47	+1.4
3,427,689	+		CCNA_03256	0.47	+1.1
3,427,698	-		CCNA_03256	0.48	+0.4
3,427,719	+		CCNA_03256	0.49	+0.9
3,427,815	+		CCNA_03256	0.58	-0.2
3,427,843	+		CCNA_03256	0.61	+0.1
3,427,930	-		CCNA_03256	0.68	+0.5
3,427,946	+		CCNA_03256	0.70	+0.1
3,427,959	-		CCNA_03256	0.71	+0.3
3,428,004	-		CCNA_03256	0.75	+1.7
3,428,202	-				+0.2
3,428,286	-				+0.6
3,428,296	-				+0.4
3,428,356	+				+0.7
3,428,361	+				+0.4
3,428,361	+				+1.0
3,428,372	+				-0.2
3,428,470	+				+0.6
3,428,551	-		CCNA_03257	0.17	-0.4
3,428,620	-		CCNA_03257	0.30	-0.6
3,428,629	+		CCNA_03257	0.31	+0.2
3,428,635	-		CCNA_03257	0.33	+1.4
3,428,675	-		CCNA_03257	0.40	-0.6
3,428,690	+		CCNA_03257	0.43	+0.3
3,428,698	-		CCNA_03257	0.44	-0.2
3,428,786	-		CCNA_03257	0.60	-0.4
3,428,798	-		CCNA_03257	0.63	+0.7
3,428,809	+		CCNA_03257	0.65	+1.4
3,428,819	+		CCNA_03257	0.66	-0.0
3,428,827	-		CCNA_03257	0.68	-0.4
3,428,925	-		CCNA_03257	0.86	-0.5
3,428,936	+		CCNA_03257	0.88	+0.4
3,428,969	-				-0.3
3,429,003	-				-1.0
3,429,003	-				-0.8
3,429,011	+				-0.0
3,429,025	+				+0.2
3,429,047	+				+0.3
3,429,047	+				+0.3
3,429,077	+		CCNA_03258	0.12	+1.2
3,429,077	+		CCNA_03258	0.12	+0.3
3,429,081	+		CCNA_03258	0.13	+0.6
3,429,089	-		CCNA_03258	0.17	+0.0
3,429,106	-		CCNA_03258	0.24	-0.4
3,429,142	+		CCNA_03258	0.39	-1.2
3,429,206	+		CCNA_03258	0.65	+1.1