Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03228

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
3,391,275	+		CCNA_03227	0.64	-1.6
3,391,282	+		CCNA_03227	0.65	-0.2
3,391,282	+		CCNA_03227	0.65	+0.1
3,391,290	-		CCNA_03227	0.65	-1.2
3,391,290	-		CCNA_03227	0.65	+0.4
3,391,314	-		CCNA_03227	0.66	+0.6
3,391,319	-		CCNA_03227	0.66	+1.0
3,391,332	-		CCNA_03227	0.67	-0.8
3,391,355	+		CCNA_03227	0.68	+0.1
3,391,355	+		CCNA_03227	0.68	-0.8
3,391,361	-		CCNA_03227	0.68	-0.3
3,391,363	-		CCNA_03227	0.68	-0.1
3,391,363	-		CCNA_03227	0.68	+0.5
3,391,363	-		CCNA_03227	0.68	+0.3
3,391,363	-		CCNA_03227	0.68	+0.1
3,391,379	-		CCNA_03227	0.69	+0.1
3,391,424	+		CCNA_03227	0.71	-1.3
3,391,431	-		CCNA_03227	0.71	-0.5
3,391,431	-		CCNA_03227	0.71	+0.3
3,391,431	-		CCNA_03227	0.71	+0.0
3,391,431	-		CCNA_03227	0.71	-0.4
3,391,454	+		CCNA_03227	0.72	-0.8
3,391,463	-		CCNA_03227	0.72	-0.9
3,391,482	-		CCNA_03227	0.73	-1.2
3,391,487	-		CCNA_03227	0.73	-0.1
3,391,521	+		CCNA_03227	0.75	-2.0
3,391,529	+		CCNA_03227	0.75	-1.0
3,391,537	-		CCNA_03227	0.75	-0.1
3,391,560	-		CCNA_03227	0.76	-0.2
3,391,563	+		CCNA_03227	0.76	-0.8
3,391,563	+		CCNA_03227	0.76	-0.5
3,391,563	+		CCNA_03227	0.76	-0.9
3,391,563	+		CCNA_03227	0.76	+0.0
3,391,576	-		CCNA_03227	0.77	-0.4
3,391,576	-		CCNA_03227	0.77	+0.7
3,391,576	-		CCNA_03227	0.77	-1.2
3,391,635	+		CCNA_03227	0.79	-0.2
3,391,635	+		CCNA_03227	0.79	-1.4
3,391,643	-		CCNA_03227	0.80	-0.0
3,391,643	-		CCNA_03227	0.80	-0.6
3,391,650	-		CCNA_03227	0.80	+0.3
3,391,686	+		CCNA_03227	0.82	-0.4
3,391,694	-		CCNA_03227	0.82	+0.1
3,391,704	+		CCNA_03227	0.82	-0.9
3,391,721	-		CCNA_03227	0.83	-0.7
3,391,740	-		CCNA_03227	0.84	-0.1
3,391,740	-		CCNA_03227	0.84	+0.4
3,391,740	-		CCNA_03227	0.84	-0.5
3,391,759	+		CCNA_03227	0.85	+0.8
3,391,823	+		CCNA_03227	0.87	-0.1
3,391,829	+		CCNA_03227	0.88	-0.8
3,391,837	-		CCNA_03227	0.88	-0.4
3,391,854	+		CCNA_03227	0.89	-1.7
3,391,854	-		CCNA_03227	0.89	+0.3
3,391,861	+		CCNA_03227	0.89	-1.3
3,391,862	+		CCNA_03227	0.89	-1.7
3,391,869	-		CCNA_03227	0.89	+0.7
3,391,871	+		CCNA_03227	0.89	-1.8
3,391,874	-		CCNA_03227	0.89	+0.7
3,391,912	-				+0.3
3,391,915	+				-0.6
3,391,937	+				+0.1
3,391,939	+				+0.4
3,391,939	-				+0.2
3,391,979	-				-0.1
3,391,987	-				-0.0
3,392,015	+				-1.7
3,392,020	+				+0.7
3,392,024	+				-2.1
3,392,025	+				-1.9
3,392,025	+				-1.8
3,392,025	+				-0.8
3,392,036	+				-1.1
3,392,056	+				+0.1
3,392,069	-				+0.2
3,392,090	-				-0.4
3,392,090	-				-0.6
3,392,098	+				-0.8
3,392,106	-				+1.1
3,392,122	+				-0.7
3,392,130	-				-1.3
3,392,137	+				-1.3
3,392,145	-				-0.4
3,392,241	+				-0.6
3,392,249	-				-0.9
3,392,289	-				-0.7
3,392,292	-				+0.9
3,392,294	+				-1.0
3,392,314	-				-2.3
3,392,329	-				+0.3
3,392,410	-				-0.5
3,392,428	+				-0.9
3,392,436	-				-0.1
3,392,450	-				+0.5
3,392,478	-		CCNA_03228	0.11	+0.2
3,392,507	-		CCNA_03228	0.12	-0.0
3,392,527	+		CCNA_03228	0.13	-1.1
3,392,527	+		CCNA_03228	0.13	+0.4
3,392,542	+		CCNA_03228	0.14	+0.2
3,392,562	-		CCNA_03228	0.15	-0.0
3,392,575	+		CCNA_03228	0.16	-0.1
3,392,600	+		CCNA_03228	0.17	-1.0
3,392,600	+		CCNA_03228	0.17	-0.5
3,392,603	-		CCNA_03228	0.17	+0.5
3,392,608	-		CCNA_03228	0.17	+0.6
3,392,608	-		CCNA_03228	0.17	+0.2
3,392,608	-		CCNA_03228	0.17	-0.2
3,392,608	-		CCNA_03228	0.17	+0.3
3,392,609	-		CCNA_03228	0.17	+0.1
3,392,612	+		CCNA_03228	0.18	-0.7
3,392,613	+		CCNA_03228	0.18	-0.5
3,392,636	+		CCNA_03228	0.19	-0.3
3,392,680	+		CCNA_03228	0.21	-1.9
3,392,700	-		CCNA_03228	0.22	+0.0
3,392,700	-		CCNA_03228	0.22	-0.6
3,392,702	+		CCNA_03228	0.22	-1.2
3,392,703	+		CCNA_03228	0.22	-0.8
3,392,705	-		CCNA_03228	0.22	+0.2
3,392,707	+		CCNA_03228	0.22	+0.2
3,392,720	-		CCNA_03228	0.23	-0.4
3,392,734	-		CCNA_03228	0.24	+0.1
3,392,770	+		CCNA_03228	0.25	+0.7
3,392,770	+		CCNA_03228	0.25	+0.3
3,392,778	-		CCNA_03228	0.26	-1.0
3,392,780	+		CCNA_03228	0.26	+0.4
3,392,788	-		CCNA_03228	0.26	+0.4
3,392,815	+		CCNA_03228	0.28	-0.2
3,392,823	-		CCNA_03228	0.28	-0.2
3,392,830	+		CCNA_03228	0.28	+0.5
3,392,833	-		CCNA_03228	0.29	+0.0
3,392,837	+		CCNA_03228	0.29	-0.4
3,392,843	-		CCNA_03228	0.29	+0.6
3,392,855	-		CCNA_03228	0.30	+0.3
3,392,859	+		CCNA_03228	0.30	+0.4
3,392,923	-		CCNA_03228	0.33	+0.5
3,392,924	+		CCNA_03228	0.33	-0.3
3,392,975	+		CCNA_03228	0.36	-0.5
3,392,983	-		CCNA_03228	0.36	-0.1
3,392,984	-		CCNA_03228	0.36	-1.2
3,393,014	+		CCNA_03228	0.37	+1.4
3,393,020	+		CCNA_03228	0.38	-0.6
3,393,025	+		CCNA_03228	0.38	+0.2
3,393,030	+		CCNA_03228	0.38	-0.2
3,393,030	+		CCNA_03228	0.38	-1.0
3,393,030	+		CCNA_03228	0.38	-1.7
3,393,033	-		CCNA_03228	0.38	+0.5
3,393,038	-		CCNA_03228	0.39	+0.1
3,393,038	-		CCNA_03228	0.39	+0.5
3,393,038	-		CCNA_03228	0.39	-0.9
3,393,038	-		CCNA_03228	0.39	+0.4
3,393,038	-		CCNA_03228	0.39	-0.8
3,393,038	-		CCNA_03228	0.39	+0.4
3,393,038	-		CCNA_03228	0.39	+1.3
3,393,061	+		CCNA_03228	0.40	-0.6
3,393,081	-		CCNA_03228	0.41	+0.1
3,393,081	-		CCNA_03228	0.41	-1.0
3,393,086	-		CCNA_03228	0.41	+0.9
3,393,086	-		CCNA_03228	0.41	+0.7
3,393,172	+		CCNA_03228	0.45	+0.5
3,393,172	+		CCNA_03228	0.45	+1.7
3,393,180	-		CCNA_03228	0.46	+0.4
3,393,180	-		CCNA_03228	0.46	+0.0
3,393,180	-		CCNA_03228	0.46	-0.2
3,393,185	-		CCNA_03228	0.46	-0.1
3,393,196	+		CCNA_03228	0.46	-0.8
3,393,208	+		CCNA_03228	0.47	+0.9
3,393,213	+		CCNA_03228	0.47	+0.2
3,393,258	-		CCNA_03228	0.50	-0.7
3,393,301	+		CCNA_03228	0.52	+0.5
3,393,301	+		CCNA_03228	0.52	+0.5
3,393,301	+		CCNA_03228	0.52	+0.1
3,393,301	+		CCNA_03228	0.52	+0.2
3,393,301	+		CCNA_03228	0.52	-0.4
3,393,301	+		CCNA_03228	0.52	-0.8
3,393,301	+		CCNA_03228	0.52	-0.7
3,393,301	+		CCNA_03228	0.52	-0.7
3,393,309	-		CCNA_03228	0.52	+0.2
3,393,309	-		CCNA_03228	0.52	-0.1
3,393,309	-		CCNA_03228	0.52	+1.1
3,393,309	-		CCNA_03228	0.52	+1.7
3,393,309	-		CCNA_03228	0.52	+0.8
3,393,309	-		CCNA_03228	0.52	-0.6
3,393,309	-		CCNA_03228	0.52	-0.3
3,393,309	-		CCNA_03228	0.52	+0.1
3,393,309	-		CCNA_03228	0.52	-0.1
3,393,309	-		CCNA_03228	0.52	+0.5
3,393,309	-		CCNA_03228	0.52	-0.3
3,393,309	-		CCNA_03228	0.52	+0.5
3,393,309	-		CCNA_03228	0.52	+0.1
3,393,321	+		CCNA_03228	0.53	-1.1
3,393,327	-		CCNA_03228	0.53	+1.0
3,393,329	-		CCNA_03228	0.53	+1.3
3,393,329	-		CCNA_03228	0.53	+0.6
3,393,330	-		CCNA_03228	0.53	-0.2
3,393,330	-		CCNA_03228	0.53	+0.3
3,393,350	+		CCNA_03228	0.54	+0.0
3,393,350	+		CCNA_03228	0.54	-1.6
3,393,359	-		CCNA_03228	0.55	+0.7
3,393,359	-		CCNA_03228	0.55	+0.5
3,393,359	-		CCNA_03228	0.55	-0.1
3,393,363	+		CCNA_03228	0.55	-1.3
3,393,413	+		CCNA_03228	0.57	-1.9
3,393,418	+		CCNA_03228	0.57	+0.2
3,393,426	-		CCNA_03228	0.58	+0.9
3,393,430	+		CCNA_03228	0.58	-0.3
3,393,431	-		CCNA_03228	0.58	+1.0
3,393,617	-		CCNA_03228	0.67	+0.2
3,393,653	-		CCNA_03228	0.69	+0.2
3,393,656	+		CCNA_03228	0.69	+1.7
3,393,659	-		CCNA_03228	0.69	-0.6
3,393,659	-		CCNA_03228	0.69	-0.4
3,393,699	+		CCNA_03228	0.71	+0.6
3,393,699	+		CCNA_03228	0.71	-0.8
3,393,699	+		CCNA_03228	0.71	-1.2
3,393,715	+		CCNA_03228	0.72	-0.4
3,393,757	+		CCNA_03228	0.74	-0.1
3,393,806	+		CCNA_03228	0.77	-1.4
3,393,833	+		CCNA_03228	0.78	-0.5
3,393,834	-		CCNA_03228	0.78	-0.1
3,393,893	-		CCNA_03228	0.81	-0.0
3,393,905	+		CCNA_03228	0.82	+0.4
3,393,914	-		CCNA_03228	0.82	-0.8
3,393,934	+		CCNA_03228	0.83	+0.3
3,393,966	-		CCNA_03228	0.85	+0.0
3,394,035	+		CCNA_03228	0.88	-0.3
3,394,105	+				-0.8
3,394,113	-				+0.2
3,394,135	-				+1.2
3,394,159	+				-0.7
3,394,159	+				+0.5
3,394,159	+				-1.0
3,394,161	+				+0.8
3,394,167	-				-0.0
3,394,212	-				+0.0
3,394,235	-				+0.8
3,394,278	+				+0.3
3,394,280	+				+0.2
3,394,280	+				-0.9
3,394,280	+				-0.1
3,394,280	+				-0.1
3,394,280	+				+0.6
3,394,280	+				-0.0
3,394,280	+				+1.0
3,394,281	-				+0.2
3,394,288	-				-0.8
3,394,293	+				+0.0
3,394,301	-				+0.1
3,394,307	-				+0.1
3,394,307	-				+1.4
3,394,307	-				+0.5
3,394,309	+				+0.5
3,394,409	+				-0.7
3,394,437	-				-1.2
3,394,462	-				+0.1
3,394,462	-				+0.2
3,394,464	+				+0.4
3,394,478	+				+0.3
3,394,478	+				-1.7
3,394,499	+		CCNA_03229	0.11	+0.7
3,394,534	+		CCNA_03229	0.13	+0.0
3,394,534	+		CCNA_03229	0.13	+0.7
3,394,534	+		CCNA_03229	0.13	-0.4
3,394,539	+		CCNA_03229	0.14	-0.1
3,394,542	-		CCNA_03229	0.14	-0.3
3,394,542	-		CCNA_03229	0.14	+0.8
3,394,542	-		CCNA_03229	0.14	+0.2
3,394,547	-		CCNA_03229	0.14	+0.5
3,394,560	+		CCNA_03229	0.16	+0.9
3,394,593	+		CCNA_03229	0.18	-0.6
3,394,593	+		CCNA_03229	0.18	+0.6
3,394,593	+		CCNA_03229	0.18	+0.3
3,394,600	+		CCNA_03229	0.19	-0.9
3,394,600	+		CCNA_03229	0.19	-0.6
3,394,601	-		CCNA_03229	0.19	-1.3
3,394,607	-		CCNA_03229	0.19	-0.1
3,394,608	-		CCNA_03229	0.19	-0.5
3,394,625	+		CCNA_03229	0.21	-0.0
3,394,638	-		CCNA_03229	0.22	+0.1
3,394,656	+		CCNA_03229	0.23	+0.4
3,394,753	+		CCNA_03229	0.30	+0.1
3,394,764	-		CCNA_03229	0.31	-0.8
3,394,785	-		CCNA_03229	0.33	-1.2
3,394,846	-		CCNA_03229	0.38	-2.5
3,394,888	+		CCNA_03229	0.41	-0.9
3,394,918	-		CCNA_03229	0.43	+0.5
3,394,923	-		CCNA_03229	0.44	+0.5
3,394,928	-		CCNA_03229	0.44	-0.8
3,395,048	-		CCNA_03229	0.53	-0.0
3,395,050	+		CCNA_03229	0.53	-0.8
3,395,058	-		CCNA_03229	0.54	-0.5
3,395,065	+		CCNA_03229	0.55	-0.4
3,395,066	+		CCNA_03229	0.55	-0.8
3,395,066	+		CCNA_03229	0.55	+0.4
3,395,101	+		CCNA_03229	0.57	-2.1
3,395,138	-		CCNA_03229	0.60	+0.6
3,395,165	-		CCNA_03229	0.62	+0.1
3,395,172	+		CCNA_03229	0.63	+0.6
3,395,180	-		CCNA_03229	0.64	-0.0
3,395,181	+		CCNA_03229	0.64	+0.4
3,395,181	+		CCNA_03229	0.64	-0.2
3,395,189	-		CCNA_03229	0.64	+0.4
3,395,189	-		CCNA_03229	0.64	-0.2
3,395,189	-		CCNA_03229	0.64	+0.0
3,395,208	+		CCNA_03229	0.66	+0.6
3,395,260	+		CCNA_03229	0.70	-1.1