Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20790 and CA264_20795 are separated by 260 nucleotides CA264_20795 and CA264_20800 are separated by 12 nucleotides CA264_20800 and CA264_20805 overlap by 14 nucleotides CA264_20805 and CA264_20810 are separated by 12 nucleotides
CA264_20790: CA264_20790 - glyceraldehyde-3-phosphate dehydrogenase, at 19,276 to 20,313
_20790
CA264_20795: CA264_20795 - hypothetical protein, at 20,574 to 20,816
_20795
CA264_20800: CA264_20800 - hypothetical protein, at 20,829 to 21,056
_20800
CA264_20805: CA264_20805 - hypothetical protein, at 21,043 to 21,324
_20805
CA264_20810: CA264_20810 - transporter, at 21,337 to 22,167
_20810
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2 at 19.879 kb on - strand, within CA264_20790 at 20.021 kb on - strand at 20.036 kb on - strand, within CA264_20790 at 20.153 kb on + strand, within CA264_20790 at 20.163 kb on - strand, within CA264_20790 at 20.173 kb on + strand, within CA264_20790 at 20.299 kb on + strand at 20.299 kb on + strand at 20.299 kb on + strand at 20.313 kb on + strand at 20.313 kb on + strand at 20.313 kb on + strand at 20.314 kb on - strand at 20.360 kb on + strand at 20.361 kb on - strand at 20.361 kb on - strand at 20.365 kb on - strand at 20.365 kb on - strand at 20.367 kb on - strand at 20.367 kb on - strand at 20.432 kb on + strand at 20.432 kb on + strand at 20.438 kb on + strand at 20.438 kb on + strand at 20.464 kb on + strand at 20.464 kb on + strand at 20.465 kb on - strand at 20.465 kb on - strand at 20.465 kb on - strand at 20.546 kb on + strand at 20.547 kb on - strand at 20.566 kb on + strand at 20.573 kb on + strand at 20.573 kb on + strand at 20.573 kb on + strand at 20.574 kb on - strand at 20.574 kb on - strand at 20.615 kb on + strand, within CA264_20795 at 20.615 kb on + strand, within CA264_20795 at 20.616 kb on - strand, within CA264_20795 at 20.639 kb on + strand, within CA264_20795 at 20.641 kb on + strand, within CA264_20795 at 20.641 kb on + strand, within CA264_20795 at 20.641 kb on + strand, within CA264_20795 at 20.664 kb on + strand, within CA264_20795 at 20.668 kb on + strand, within CA264_20795 at 20.697 kb on + strand, within CA264_20795 at 20.717 kb on - strand, within CA264_20795 at 20.766 kb on + strand, within CA264_20795 at 20.766 kb on + strand, within CA264_20795 at 20.766 kb on + strand, within CA264_20795 at 20.806 kb on + strand at 20.820 kb on + strand at 20.820 kb on + strand at 20.821 kb on - strand at 20.821 kb on - strand at 20.821 kb on - strand at 20.843 kb on - strand at 20.864 kb on + strand, within CA264_20800 at 20.864 kb on + strand, within CA264_20800 at 20.865 kb on - strand, within CA264_20800 at 20.865 kb on - strand, within CA264_20800 at 20.865 kb on - strand, within CA264_20800 at 21.042 kb on + strand at 21.042 kb on + strand at 21.042 kb on + strand at 21.059 kb on + strand at 21.060 kb on - strand at 21.151 kb on - strand, within CA264_20805 at 21.234 kb on - strand, within CA264_20805 at 21.253 kb on - strand, within CA264_20805 at 21.253 kb on - strand, within CA264_20805 at 21.258 kb on - strand, within CA264_20805 at 21.269 kb on + strand, within CA264_20805 at 21.318 kb on + strand at 21.327 kb on - strand at 21.338 kb on + strand at 21.440 kb on - strand, within CA264_20810 at 21.444 kb on + strand, within CA264_20810 at 21.444 kb on + strand, within CA264_20810 at 21.444 kb on + strand, within CA264_20810 at 21.471 kb on + strand, within CA264_20810 at 21.471 kb on + strand, within CA264_20810 at 21.471 kb on + strand, within CA264_20810 at 21.471 kb on + strand, within CA264_20810 at 21.551 kb on + strand, within CA264_20810 at 21.551 kb on + strand, within CA264_20810 at 21.552 kb on - strand, within CA264_20810 at 21.552 kb on - strand, within CA264_20810 at 21.552 kb on - strand, within CA264_20810 at 21.555 kb on + strand, within CA264_20810 at 21.562 kb on + strand, within CA264_20810 at 21.562 kb on + strand, within CA264_20810 at 21.562 kb on + strand, within CA264_20810 at 21.563 kb on - strand, within CA264_20810 at 21.563 kb on - strand, within CA264_20810 at 21.563 kb on - strand, within CA264_20810 at 21.563 kb on - strand, within CA264_20810 at 21.575 kb on - strand, within CA264_20810 at 21.681 kb on + strand, within CA264_20810 at 21.682 kb on - strand, within CA264_20810 at 21.838 kb on + strand, within CA264_20810 at 21.858 kb on + strand, within CA264_20810 at 21.859 kb on - strand, within CA264_20810 at 21.864 kb on + strand, within CA264_20810 at 21.865 kb on - strand, within CA264_20810 at 21.896 kb on - strand, within CA264_20810 at 21.896 kb on - strand, within CA264_20810 at 21.896 kb on - strand, within CA264_20810 at 21.897 kb on + strand, within CA264_20810 at 21.965 kb on + strand, within CA264_20810 at 22.048 kb on - strand, within CA264_20810
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 19,879 - CA264_20790 0.58 -0.4 20,021 - +1.3 20,036 - CA264_20790 0.73 -0.6 20,153 + CA264_20790 0.84 +0.1 20,163 - CA264_20790 0.85 -0.4 20,173 + CA264_20790 0.86 +0.5 20,299 + -0.3 20,299 + -0.1 20,299 + +0.5 20,313 + +0.1 20,313 + +0.3 20,313 + +0.1 20,314 - +0.5 20,360 + +0.0 20,361 - +0.3 20,361 - -0.6 20,365 - -0.5 20,365 - +0.3 20,367 - +0.6 20,367 - +1.4 20,432 + +0.4 20,432 + -0.2 20,438 + -0.8 20,438 + -0.1 20,464 + +0.4 20,464 + -0.4 20,465 - +0.2 20,465 - -0.4 20,465 - -0.3 20,546 + +0.4 20,547 - -0.3 20,566 + +0.1 20,573 + +1.3 20,573 + -0.1 20,573 + -0.3 20,574 - -1.5 20,574 - +1.3 20,615 + CA264_20795 0.17 +0.5 20,615 + CA264_20795 0.17 +0.2 20,616 - CA264_20795 0.17 -0.1 20,639 + CA264_20795 0.27 -1.5 20,641 + CA264_20795 0.28 +0.2 20,641 + CA264_20795 0.28 +0.4 20,641 + CA264_20795 0.28 +0.4 20,664 + CA264_20795 0.37 +0.1 20,668 + CA264_20795 0.39 +0.0 20,697 + CA264_20795 0.51 -0.1 20,717 - CA264_20795 0.59 +1.1 20,766 + CA264_20795 0.79 +0.7 20,766 + CA264_20795 0.79 -0.2 20,766 + CA264_20795 0.79 -1.4 20,806 + +0.9 20,820 + +0.9 20,820 + +0.7 20,821 - -0.8 20,821 - -0.2 20,821 - +0.5 20,843 - -0.2 20,864 + CA264_20800 0.15 +0.2 20,864 + CA264_20800 0.15 +0.1 20,865 - CA264_20800 0.16 +0.3 20,865 - CA264_20800 0.16 +1.2 20,865 - CA264_20800 0.16 -0.8 21,042 + -0.3 21,042 + +2.2 21,042 + +0.1 21,059 + +0.4 21,060 - -0.1 21,151 - CA264_20805 0.38 +0.3 21,234 - CA264_20805 0.68 -0.4 21,253 - CA264_20805 0.74 +0.5 21,253 - CA264_20805 0.74 +0.9 21,258 - CA264_20805 0.76 -0.4 21,269 + CA264_20805 0.80 +0.5 21,318 + +0.2 21,327 - +0.5 21,338 + -2.1 21,440 - CA264_20810 0.12 -0.7 21,444 + CA264_20810 0.13 +0.2 21,444 + CA264_20810 0.13 +0.4 21,444 + CA264_20810 0.13 +1.4 21,471 + CA264_20810 0.16 -1.1 21,471 + CA264_20810 0.16 +0.4 21,471 + CA264_20810 0.16 -0.0 21,471 + CA264_20810 0.16 +0.0 21,551 + CA264_20810 0.26 -0.1 21,551 + CA264_20810 0.26 +0.1 21,552 - CA264_20810 0.26 -1.2 21,552 - CA264_20810 0.26 +0.7 21,552 - CA264_20810 0.26 -0.4 21,555 + CA264_20810 0.26 +0.5 21,562 + CA264_20810 0.27 +0.9 21,562 + CA264_20810 0.27 -0.4 21,562 + CA264_20810 0.27 -1.1 21,563 - CA264_20810 0.27 -0.2 21,563 - CA264_20810 0.27 -0.5 21,563 - CA264_20810 0.27 -0.1 21,563 - CA264_20810 0.27 -0.4 21,575 - CA264_20810 0.29 -1.5 21,681 + CA264_20810 0.41 +1.0 21,682 - CA264_20810 0.42 +1.2 21,838 + CA264_20810 0.60 +0.7 21,858 + CA264_20810 0.63 -1.1 21,859 - CA264_20810 0.63 +0.2 21,864 + CA264_20810 0.63 -0.6 21,865 - CA264_20810 0.64 +1.2 21,896 - CA264_20810 0.67 -0.2 21,896 - CA264_20810 0.67 +0.1 21,896 - CA264_20810 0.67 +0.9 21,897 + CA264_20810 0.67 -0.6 21,965 + CA264_20810 0.76 -0.6 22,048 - CA264_20810 0.86 +2.4
Or see this region's nucleotide sequence