Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19745 and CA264_19750 are separated by 193 nucleotides CA264_19750 and CA264_19755 are separated by 262 nucleotides CA264_19755 and CA264_19760 are separated by 119 nucleotides
CA264_19745: CA264_19745 - serine/threonine protein phosphatase, at 4,556,883 to 4,559,048
_19745
CA264_19750: CA264_19750 - IMP dehydrogenase, at 4,559,242 to 4,560,711
_19750
CA264_19755: CA264_19755 - rhodanese, at 4,560,974 to 4,561,291
_19755
CA264_19760: CA264_19760 - hypothetical protein, at 4,561,411 to 4,562,124
_19760
Position (kb)
4559
4560
4561 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4558.285 kb on + strand, within CA264_19745 at 4558.285 kb on + strand, within CA264_19745 at 4558.285 kb on + strand, within CA264_19745 at 4558.285 kb on + strand, within CA264_19745 at 4558.285 kb on + strand, within CA264_19745 at 4558.293 kb on - strand, within CA264_19745 at 4558.301 kb on + strand, within CA264_19745 at 4558.423 kb on + strand, within CA264_19745 at 4558.423 kb on + strand, within CA264_19745 at 4558.424 kb on - strand, within CA264_19745 at 4558.424 kb on - strand, within CA264_19745 at 4558.424 kb on - strand, within CA264_19745 at 4558.433 kb on - strand, within CA264_19745 at 4558.436 kb on + strand, within CA264_19745 at 4558.522 kb on + strand, within CA264_19745 at 4558.546 kb on + strand, within CA264_19745 at 4558.546 kb on + strand, within CA264_19745 at 4558.547 kb on - strand, within CA264_19745 at 4558.784 kb on + strand, within CA264_19745 at 4558.949 kb on + strand at 4558.950 kb on - strand at 4558.989 kb on - strand at 4559.010 kb on + strand at 4559.084 kb on - strand at 4559.088 kb on + strand at 4559.089 kb on - strand at 4559.092 kb on + strand at 4559.095 kb on - strand at 4559.112 kb on + strand at 4559.113 kb on - strand at 4559.113 kb on - strand at 4559.211 kb on + strand at 4559.211 kb on + strand at 4559.212 kb on - strand at 4559.216 kb on - strand at 4559.223 kb on + strand at 4559.224 kb on - strand at 4559.232 kb on - strand at 4559.232 kb on - strand at 4559.233 kb on + strand at 4559.233 kb on + strand at 4559.278 kb on + strand at 4559.278 kb on + strand at 4559.279 kb on - strand at 4559.406 kb on - strand, within CA264_19750 at 4559.556 kb on + strand, within CA264_19750 at 4559.574 kb on - strand, within CA264_19750 at 4559.776 kb on + strand, within CA264_19750 at 4559.794 kb on - strand, within CA264_19750 at 4559.794 kb on - strand, within CA264_19750 at 4559.794 kb on - strand, within CA264_19750 at 4560.168 kb on + strand, within CA264_19750 at 4560.333 kb on + strand, within CA264_19750 at 4560.441 kb on + strand, within CA264_19750 at 4560.442 kb on - strand, within CA264_19750 at 4560.452 kb on - strand, within CA264_19750 at 4560.452 kb on - strand, within CA264_19750 at 4560.597 kb on + strand at 4560.642 kb on - strand at 4560.733 kb on + strand at 4560.733 kb on + strand at 4560.760 kb on + strand at 4560.769 kb on - strand at 4560.831 kb on - strand at 4560.897 kb on - strand at 4560.941 kb on + strand at 4560.953 kb on + strand at 4560.976 kb on - strand at 4560.978 kb on + strand at 4561.313 kb on - strand at 4561.315 kb on - strand at 4561.321 kb on - strand at 4561.339 kb on - strand at 4561.392 kb on - strand at 4561.431 kb on - strand at 4561.541 kb on - strand, within CA264_19760 at 4561.687 kb on + strand, within CA264_19760 at 4561.691 kb on - strand, within CA264_19760
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,558,285 + CA264_19745 0.65 +1.3 4,558,285 + CA264_19745 0.65 -0.6 4,558,285 + CA264_19745 0.65 -0.3 4,558,285 + CA264_19745 0.65 -0.2 4,558,285 + CA264_19745 0.65 -0.9 4,558,293 - CA264_19745 0.65 +1.1 4,558,301 + CA264_19745 0.65 +0.1 4,558,423 + CA264_19745 0.71 -0.4 4,558,423 + CA264_19745 0.71 +0.2 4,558,424 - CA264_19745 0.71 -0.1 4,558,424 - CA264_19745 0.71 -0.1 4,558,424 - CA264_19745 0.71 -0.9 4,558,433 - CA264_19745 0.72 +0.4 4,558,436 + CA264_19745 0.72 +0.1 4,558,522 + CA264_19745 0.76 -1.0 4,558,546 + CA264_19745 0.77 -0.4 4,558,546 + CA264_19745 0.77 -0.6 4,558,547 - CA264_19745 0.77 +1.7 4,558,784 + CA264_19745 0.88 +0.4 4,558,949 + -0.4 4,558,950 - +0.8 4,558,989 - +0.8 4,559,010 + +0.1 4,559,084 - +0.5 4,559,088 + +0.2 4,559,089 - +0.5 4,559,092 + -0.0 4,559,095 - +0.4 4,559,112 + +0.0 4,559,113 - +2.0 4,559,113 - -0.1 4,559,211 + +0.4 4,559,211 + +0.3 4,559,212 - +0.1 4,559,216 - +0.6 4,559,223 + -0.1 4,559,224 - +0.7 4,559,232 - -0.3 4,559,232 - +0.4 4,559,233 + -0.5 4,559,233 + -0.3 4,559,278 + +0.5 4,559,278 + +0.3 4,559,279 - +0.6 4,559,406 - CA264_19750 0.11 +2.0 4,559,556 + CA264_19750 0.21 -1.5 4,559,574 - CA264_19750 0.23 +0.3 4,559,776 + CA264_19750 0.36 +1.5 4,559,794 - CA264_19750 0.38 +1.5 4,559,794 - CA264_19750 0.38 -0.6 4,559,794 - CA264_19750 0.38 +0.0 4,560,168 + CA264_19750 0.63 +0.0 4,560,333 + CA264_19750 0.74 +1.0 4,560,441 + CA264_19750 0.82 +0.2 4,560,442 - CA264_19750 0.82 +0.7 4,560,452 - CA264_19750 0.82 -0.4 4,560,452 - CA264_19750 0.82 -0.5 4,560,597 + +0.5 4,560,642 - +1.4 4,560,733 + +0.1 4,560,733 + -1.3 4,560,760 + -0.1 4,560,769 - +0.4 4,560,831 - +1.7 4,560,897 - +0.0 4,560,941 + +0.1 4,560,953 + +3.3 4,560,976 - -1.0 4,560,978 + +0.3 4,561,313 - -0.1 4,561,315 - -0.3 4,561,321 - -0.0 4,561,339 - -0.4 4,561,392 - +0.2 4,561,431 - +0.7 4,561,541 - CA264_19760 0.18 -0.8 4,561,687 + CA264_19760 0.39 -0.8 4,561,691 - CA264_19760 0.39 -0.7
Or see this region's nucleotide sequence