Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19730

Experiment: m.b. Cobalt chloride 0.3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_19725 and CA264_19730 are separated by 110 nucleotidesCA264_19730 and CA264_19735 are separated by 164 nucleotidesCA264_19735 and CA264_19740 overlap by 8 nucleotidesCA264_19740 and CA264_19745 are separated by 20 nucleotides CA264_19725: CA264_19725 - peptidylprolyl isomerase, at 4,552,190 to 4,553,545 _19725 CA264_19730: CA264_19730 - peptidylprolyl isomerase, at 4,553,656 to 4,555,956 _19730 CA264_19735: CA264_19735 - ATP-binding protein, at 4,556,121 to 4,556,531 _19735 CA264_19740: CA264_19740 - anti-sigma F factor antagonist, at 4,556,524 to 4,556,862 _19740 CA264_19745: CA264_19745 - serine/threonine protein phosphatase, at 4,556,883 to 4,559,048 _19745 Position (kb) 4553 4554 4555 4556Strain fitness (log2 ratio) -2 -1 0 1at 4553.498 kb on + strandat 4553.571 kb on + strandat 4553.576 kb on - strandat 4553.616 kb on - strandat 4553.618 kb on + strandat 4553.666 kb on - strandat 4553.678 kb on - strandat 4553.858 kb on + strandat 4553.859 kb on - strandat 4553.879 kb on - strandat 4553.991 kb on - strand, within CA264_19730at 4554.069 kb on - strand, within CA264_19730at 4554.288 kb on + strand, within CA264_19730at 4554.288 kb on + strand, within CA264_19730at 4554.288 kb on + strand, within CA264_19730at 4554.309 kb on + strand, within CA264_19730at 4554.408 kb on + strand, within CA264_19730at 4554.408 kb on + strand, within CA264_19730at 4554.408 kb on + strand, within CA264_19730at 4554.409 kb on - strand, within CA264_19730at 4554.409 kb on - strand, within CA264_19730at 4554.409 kb on - strand, within CA264_19730at 4554.410 kb on + strand, within CA264_19730at 4554.410 kb on + strand, within CA264_19730at 4554.410 kb on + strand, within CA264_19730at 4554.410 kb on + strand, within CA264_19730at 4554.410 kb on + strand, within CA264_19730at 4554.411 kb on - strand, within CA264_19730at 4554.539 kb on + strand, within CA264_19730at 4554.546 kb on + strand, within CA264_19730at 4554.547 kb on - strand, within CA264_19730at 4554.548 kb on + strand, within CA264_19730at 4554.548 kb on + strand, within CA264_19730at 4554.548 kb on + strand, within CA264_19730at 4554.549 kb on - strand, within CA264_19730at 4554.575 kb on + strand, within CA264_19730at 4554.667 kb on + strand, within CA264_19730at 4554.667 kb on + strand, within CA264_19730at 4554.668 kb on - strand, within CA264_19730at 4554.671 kb on + strand, within CA264_19730at 4554.671 kb on + strand, within CA264_19730at 4554.671 kb on + strand, within CA264_19730at 4554.671 kb on + strand, within CA264_19730at 4554.671 kb on + strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.672 kb on - strand, within CA264_19730at 4554.677 kb on + strand, within CA264_19730at 4554.678 kb on - strand, within CA264_19730at 4554.678 kb on - strand, within CA264_19730at 4554.695 kb on + strand, within CA264_19730at 4554.695 kb on + strand, within CA264_19730at 4554.695 kb on + strand, within CA264_19730at 4554.695 kb on + strand, within CA264_19730at 4554.696 kb on - strand, within CA264_19730at 4554.696 kb on - strand, within CA264_19730at 4554.752 kb on + strand, within CA264_19730at 4554.825 kb on + strand, within CA264_19730at 4554.961 kb on + strand, within CA264_19730at 4554.962 kb on - strand, within CA264_19730at 4554.962 kb on - strand, within CA264_19730at 4554.962 kb on - strand, within CA264_19730at 4555.164 kb on - strand, within CA264_19730at 4555.367 kb on + strand, within CA264_19730at 4555.593 kb on - strand, within CA264_19730at 4555.637 kb on + strand, within CA264_19730at 4555.638 kb on - strand, within CA264_19730at 4555.745 kb on + strandat 4555.746 kb on - strandat 4555.746 kb on - strandat 4555.758 kb on - strandat 4555.781 kb on + strandat 4555.781 kb on + strandat 4555.782 kb on - strandat 4555.782 kb on - strandat 4555.814 kb on + strandat 4555.814 kb on + strandat 4555.815 kb on - strandat 4555.836 kb on + strandat 4555.837 kb on - strandat 4555.837 kb on - strandat 4555.837 kb on - strandat 4555.842 kb on + strandat 4555.842 kb on + strandat 4555.842 kb on + strandat 4555.842 kb on + strandat 4555.843 kb on - strandat 4555.861 kb on - strandat 4555.933 kb on + strandat 4555.933 kb on + strandat 4555.939 kb on + strandat 4555.940 kb on - strandat 4555.940 kb on - strandat 4555.956 kb on + strandat 4556.006 kb on - strandat 4556.035 kb on + strandat 4556.036 kb on - strandat 4556.036 kb on - strandat 4556.109 kb on + strandat 4556.110 kb on - strandat 4556.110 kb on - strandat 4556.122 kb on + strandat 4556.122 kb on + strandat 4556.123 kb on - strandat 4556.525 kb on + strandat 4556.679 kb on + strand, within CA264_19740at 4556.709 kb on - strand, within CA264_19740at 4556.744 kb on + strand, within CA264_19740at 4556.868 kb on + strandat 4556.869 kb on - strandat 4556.938 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM
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4,553,498 + -1.6
4,553,571 + -1.3
4,553,576 - -0.0
4,553,616 - +0.6
4,553,618 + +0.5
4,553,666 - -0.0
4,553,678 - +0.1
4,553,858 + +0.1
4,553,859 - +0.9
4,553,879 - +0.3
4,553,991 - CA264_19730 0.15 +0.7
4,554,069 - CA264_19730 0.18 -0.3
4,554,288 + CA264_19730 0.27 -1.0
4,554,288 + CA264_19730 0.27 -0.3
4,554,288 + CA264_19730 0.27 +0.1
4,554,309 + CA264_19730 0.28 -1.0
4,554,408 + CA264_19730 0.33 -0.9
4,554,408 + CA264_19730 0.33 +0.2
4,554,408 + CA264_19730 0.33 +1.2
4,554,409 - CA264_19730 0.33 -0.3
4,554,409 - CA264_19730 0.33 -0.5
4,554,409 - CA264_19730 0.33 -0.8
4,554,410 + CA264_19730 0.33 +1.7
4,554,410 + CA264_19730 0.33 -0.2
4,554,410 + CA264_19730 0.33 +0.7
4,554,410 + CA264_19730 0.33 -0.1
4,554,410 + CA264_19730 0.33 +0.4
4,554,411 - CA264_19730 0.33 -0.4
4,554,539 + CA264_19730 0.38 -0.6
4,554,546 + CA264_19730 0.39 -0.0
4,554,547 - CA264_19730 0.39 +1.5
4,554,548 + CA264_19730 0.39 -0.6
4,554,548 + CA264_19730 0.39 +0.0
4,554,548 + CA264_19730 0.39 -0.5
4,554,549 - CA264_19730 0.39 -0.0
4,554,575 + CA264_19730 0.40 -0.6
4,554,667 + CA264_19730 0.44 -1.0
4,554,667 + CA264_19730 0.44 -0.5
4,554,668 - CA264_19730 0.44 +0.3
4,554,671 + CA264_19730 0.44 +0.5
4,554,671 + CA264_19730 0.44 +0.5
4,554,671 + CA264_19730 0.44 -0.8
4,554,671 + CA264_19730 0.44 -0.2
4,554,671 + CA264_19730 0.44 -0.8
4,554,672 - CA264_19730 0.44 -1.2
4,554,672 - CA264_19730 0.44 -0.3
4,554,672 - CA264_19730 0.44 +0.0
4,554,672 - CA264_19730 0.44 +0.5
4,554,672 - CA264_19730 0.44 -0.4
4,554,672 - CA264_19730 0.44 +0.4
4,554,672 - CA264_19730 0.44 +0.4
4,554,672 - CA264_19730 0.44 -1.8
4,554,677 + CA264_19730 0.44 -0.2
4,554,678 - CA264_19730 0.44 -0.0
4,554,678 - CA264_19730 0.44 +0.2
4,554,695 + CA264_19730 0.45 +0.4
4,554,695 + CA264_19730 0.45 -0.3
4,554,695 + CA264_19730 0.45 -1.4
4,554,695 + CA264_19730 0.45 -0.0
4,554,696 - CA264_19730 0.45 -0.4
4,554,696 - CA264_19730 0.45 -0.0
4,554,752 + CA264_19730 0.48 +0.7
4,554,825 + CA264_19730 0.51 -0.4
4,554,961 + CA264_19730 0.57 -2.6
4,554,962 - CA264_19730 0.57 +0.6
4,554,962 - CA264_19730 0.57 -0.1
4,554,962 - CA264_19730 0.57 -0.7
4,555,164 - CA264_19730 0.66 -0.0
4,555,367 + CA264_19730 0.74 +0.2
4,555,593 - CA264_19730 0.84 +0.4
4,555,637 + CA264_19730 0.86 -1.7
4,555,638 - CA264_19730 0.86 +0.4
4,555,745 + -1.6
4,555,746 - +0.9
4,555,746 - +0.4
4,555,758 - +0.7
4,555,781 + +0.5
4,555,781 + +0.3
4,555,782 - -0.3
4,555,782 - -0.2
4,555,814 + -0.3
4,555,814 + +0.2
4,555,815 - -0.5
4,555,836 + -0.7
4,555,837 - -0.2
4,555,837 - +0.4
4,555,837 - -1.1
4,555,842 + +0.2
4,555,842 + -0.2
4,555,842 + +0.3
4,555,842 + -0.2
4,555,843 - -0.4
4,555,861 - +0.2
4,555,933 + +0.4
4,555,933 + -0.2
4,555,939 + +0.4
4,555,940 - +0.2
4,555,940 - -0.0
4,555,956 + -0.3
4,556,006 - -0.2
4,556,035 + -0.0
4,556,036 - +1.2
4,556,036 - +1.3
4,556,109 + +0.2
4,556,110 - -0.4
4,556,110 - -0.9
4,556,122 + -0.9
4,556,122 + -0.4
4,556,123 - -1.7
4,556,525 + -0.3
4,556,679 + CA264_19740 0.46 +0.2
4,556,709 - CA264_19740 0.55 -0.7
4,556,744 + CA264_19740 0.65 -0.3
4,556,868 + +0.4
4,556,869 - +0.1
4,556,938 + -0.5

Or see this region's nucleotide sequence