Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19540 and CA264_19545 are separated by 103 nucleotides CA264_19545 and CA264_19550 are separated by 106 nucleotides CA264_19550 and CA264_19555 are separated by 70 nucleotides
CA264_19540: CA264_19540 - hypothetical protein, at 4,514,287 to 4,515,126
_19540
CA264_19545: CA264_19545 - oxidoreductase, at 4,515,230 to 4,516,123
_19545
CA264_19550: CA264_19550 - diaminopimelate epimerase, at 4,516,230 to 4,517,015
_19550
CA264_19555: CA264_19555 - GNAT family N-acetyltransferase, at 4,517,086 to 4,517,601
_19555
Position (kb)
4515
4516
4517 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4514.244 kb on + strand at 4514.284 kb on + strand at 4514.288 kb on + strand at 4514.315 kb on + strand at 4514.345 kb on + strand at 4514.451 kb on + strand, within CA264_19540 at 4514.533 kb on - strand, within CA264_19540 at 4514.534 kb on + strand, within CA264_19540 at 4514.535 kb on - strand, within CA264_19540 at 4514.593 kb on + strand, within CA264_19540 at 4514.645 kb on - strand, within CA264_19540 at 4514.648 kb on + strand, within CA264_19540 at 4514.648 kb on + strand, within CA264_19540 at 4514.649 kb on - strand, within CA264_19540 at 4514.652 kb on + strand, within CA264_19540 at 4514.652 kb on + strand, within CA264_19540 at 4514.653 kb on - strand, within CA264_19540 at 4514.653 kb on - strand, within CA264_19540 at 4514.681 kb on + strand, within CA264_19540 at 4514.701 kb on + strand, within CA264_19540 at 4514.816 kb on + strand, within CA264_19540 at 4514.816 kb on + strand, within CA264_19540 at 4514.816 kb on + strand, within CA264_19540 at 4514.817 kb on - strand, within CA264_19540 at 4514.873 kb on - strand, within CA264_19540 at 4514.925 kb on + strand, within CA264_19540 at 4514.956 kb on - strand, within CA264_19540 at 4514.964 kb on + strand, within CA264_19540 at 4514.964 kb on + strand, within CA264_19540 at 4514.964 kb on + strand, within CA264_19540 at 4514.965 kb on - strand, within CA264_19540 at 4514.976 kb on + strand, within CA264_19540 at 4514.977 kb on - strand, within CA264_19540 at 4515.001 kb on - strand, within CA264_19540 at 4515.001 kb on - strand, within CA264_19540 at 4515.003 kb on + strand, within CA264_19540 at 4515.004 kb on - strand, within CA264_19540 at 4515.012 kb on + strand, within CA264_19540 at 4515.013 kb on - strand, within CA264_19540 at 4515.056 kb on + strand at 4515.057 kb on - strand at 4515.075 kb on + strand at 4515.147 kb on + strand at 4515.148 kb on - strand at 4515.155 kb on + strand at 4515.165 kb on + strand at 4515.165 kb on + strand at 4515.172 kb on - strand at 4515.204 kb on + strand at 4515.213 kb on - strand at 4515.231 kb on + strand at 4515.231 kb on + strand at 4515.248 kb on - strand at 4515.301 kb on - strand at 4515.399 kb on - strand, within CA264_19545 at 4515.505 kb on - strand, within CA264_19545 at 4515.534 kb on + strand, within CA264_19545 at 4515.551 kb on + strand, within CA264_19545 at 4515.568 kb on - strand, within CA264_19545 at 4515.671 kb on + strand, within CA264_19545 at 4515.715 kb on + strand, within CA264_19545 at 4515.774 kb on + strand, within CA264_19545 at 4515.778 kb on + strand, within CA264_19545 at 4515.779 kb on - strand, within CA264_19545 at 4515.824 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.873 kb on + strand, within CA264_19545 at 4516.032 kb on + strand, within CA264_19545 at 4516.033 kb on - strand, within CA264_19545 at 4516.035 kb on + strand at 4516.036 kb on - strand at 4516.119 kb on + strand at 4516.119 kb on + strand at 4516.120 kb on - strand at 4516.123 kb on + strand at 4516.124 kb on - strand at 4516.124 kb on - strand at 4516.148 kb on - strand at 4516.148 kb on - strand at 4516.191 kb on - strand at 4516.214 kb on + strand at 4516.215 kb on - strand at 4516.227 kb on + strand at 4516.228 kb on - strand at 4516.228 kb on - strand at 4516.228 kb on - strand at 4516.228 kb on - strand at 4517.014 kb on - strand at 4517.107 kb on - strand at 4517.110 kb on + strand at 4517.111 kb on - strand at 4517.111 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,514,244 + -0.1 4,514,284 + -0.2 4,514,288 + -0.1 4,514,315 + -0.4 4,514,345 + +1.0 4,514,451 + CA264_19540 0.20 -0.8 4,514,533 - CA264_19540 0.29 -0.5 4,514,534 + CA264_19540 0.29 +1.0 4,514,535 - CA264_19540 0.30 +0.0 4,514,593 + CA264_19540 0.36 -2.2 4,514,645 - CA264_19540 0.43 -0.3 4,514,648 + CA264_19540 0.43 -0.3 4,514,648 + CA264_19540 0.43 +0.4 4,514,649 - CA264_19540 0.43 -0.9 4,514,652 + CA264_19540 0.43 -0.2 4,514,652 + CA264_19540 0.43 -0.7 4,514,653 - CA264_19540 0.44 -0.2 4,514,653 - CA264_19540 0.44 +1.1 4,514,681 + CA264_19540 0.47 +0.1 4,514,701 + CA264_19540 0.49 +0.5 4,514,816 + CA264_19540 0.63 +0.5 4,514,816 + CA264_19540 0.63 -0.1 4,514,816 + CA264_19540 0.63 -0.1 4,514,817 - CA264_19540 0.63 -0.3 4,514,873 - CA264_19540 0.70 -0.2 4,514,925 + CA264_19540 0.76 -0.2 4,514,956 - CA264_19540 0.80 +0.6 4,514,964 + CA264_19540 0.81 +0.1 4,514,964 + CA264_19540 0.81 +0.9 4,514,964 + CA264_19540 0.81 -0.5 4,514,965 - CA264_19540 0.81 +0.5 4,514,976 + CA264_19540 0.82 +0.5 4,514,977 - CA264_19540 0.82 -0.1 4,515,001 - CA264_19540 0.85 -0.2 4,515,001 - CA264_19540 0.85 -1.2 4,515,003 + CA264_19540 0.85 -0.4 4,515,004 - CA264_19540 0.85 -0.7 4,515,012 + CA264_19540 0.86 -0.0 4,515,013 - CA264_19540 0.86 -0.4 4,515,056 + -0.1 4,515,057 - -0.6 4,515,075 + -0.0 4,515,147 + -0.8 4,515,148 - -0.4 4,515,155 + +1.1 4,515,165 + -0.2 4,515,165 + +0.2 4,515,172 - -0.7 4,515,204 + +0.2 4,515,213 - -0.6 4,515,231 + -0.0 4,515,231 + -0.9 4,515,248 - -0.5 4,515,301 - +1.2 4,515,399 - CA264_19545 0.19 +1.9 4,515,505 - CA264_19545 0.31 +0.1 4,515,534 + CA264_19545 0.34 +0.5 4,515,551 + CA264_19545 0.36 +1.2 4,515,568 - CA264_19545 0.38 +0.4 4,515,671 + CA264_19545 0.49 +0.4 4,515,715 + CA264_19545 0.54 -0.6 4,515,774 + CA264_19545 0.61 +1.1 4,515,778 + CA264_19545 0.61 +0.7 4,515,779 - CA264_19545 0.61 +0.4 4,515,824 - CA264_19545 0.66 +0.3 4,515,868 - CA264_19545 0.71 +1.5 4,515,868 - CA264_19545 0.71 +0.4 4,515,868 - CA264_19545 0.71 +1.5 4,515,868 - CA264_19545 0.71 +1.0 4,515,868 - CA264_19545 0.71 +0.4 4,515,873 + CA264_19545 0.72 +1.1 4,516,032 + CA264_19545 0.90 +1.0 4,516,033 - CA264_19545 0.90 +0.6 4,516,035 + +0.4 4,516,036 - +0.4 4,516,119 + +0.5 4,516,119 + +1.5 4,516,120 - -0.3 4,516,123 + -0.4 4,516,124 - +0.6 4,516,124 - -0.1 4,516,148 - -1.0 4,516,148 - +0.1 4,516,191 - -2.0 4,516,214 + -0.5 4,516,215 - +1.5 4,516,227 + -0.4 4,516,228 - -0.8 4,516,228 - -0.8 4,516,228 - +0.3 4,516,228 - -1.1 4,517,014 - -0.5 4,517,107 - -0.0 4,517,110 + -0.2 4,517,111 - -0.5 4,517,111 - -0.6
Or see this region's nucleotide sequence