Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17285 and CA264_17290 are separated by 0 nucleotides CA264_17290 and CA264_17295 are separated by 74 nucleotides
CA264_17285: CA264_17285 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 4,019,954 to 4,021,816
_17285
CA264_17290: CA264_17290 - methyltransferase, at 4,021,817 to 4,022,704
_17290
CA264_17295: CA264_17295 - hypothetical protein, at 4,022,779 to 4,024,389
_17295
Position (kb)
4021
4022
4023 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4021.173 kb on + strand, within CA264_17285 at 4021.800 kb on + strand at 4021.806 kb on + strand at 4021.806 kb on + strand at 4021.814 kb on + strand at 4021.814 kb on + strand at 4021.823 kb on + strand at 4021.823 kb on + strand at 4021.824 kb on - strand at 4021.884 kb on + strand at 4021.980 kb on + strand, within CA264_17290 at 4021.988 kb on + strand, within CA264_17290 at 4021.991 kb on + strand, within CA264_17290 at 4021.991 kb on + strand, within CA264_17290 at 4021.991 kb on + strand, within CA264_17290 at 4021.991 kb on + strand, within CA264_17290 at 4021.992 kb on - strand, within CA264_17290 at 4022.006 kb on + strand, within CA264_17290 at 4022.071 kb on + strand, within CA264_17290 at 4022.130 kb on + strand, within CA264_17290 at 4022.130 kb on + strand, within CA264_17290 at 4022.131 kb on - strand, within CA264_17290 at 4022.200 kb on - strand, within CA264_17290 at 4022.273 kb on - strand, within CA264_17290 at 4022.274 kb on + strand, within CA264_17290 at 4022.275 kb on - strand, within CA264_17290 at 4022.275 kb on - strand, within CA264_17290 at 4022.329 kb on + strand, within CA264_17290 at 4022.330 kb on - strand, within CA264_17290 at 4022.391 kb on + strand, within CA264_17290 at 4022.392 kb on - strand, within CA264_17290 at 4022.392 kb on - strand, within CA264_17290 at 4022.429 kb on + strand, within CA264_17290 at 4022.429 kb on + strand, within CA264_17290 at 4022.471 kb on + strand, within CA264_17290 at 4022.515 kb on + strand, within CA264_17290 at 4022.536 kb on - strand, within CA264_17290 at 4022.574 kb on + strand, within CA264_17290 at 4022.645 kb on + strand at 4022.686 kb on + strand at 4022.702 kb on + strand at 4022.705 kb on + strand at 4022.705 kb on + strand at 4022.733 kb on + strand at 4022.733 kb on + strand at 4022.766 kb on - strand at 4022.787 kb on - strand at 4022.790 kb on - strand at 4022.891 kb on + strand at 4022.929 kb on - strand at 4022.973 kb on + strand, within CA264_17295 at 4022.973 kb on + strand, within CA264_17295 at 4022.974 kb on - strand, within CA264_17295 at 4022.974 kb on - strand, within CA264_17295 at 4022.974 kb on - strand, within CA264_17295 at 4023.007 kb on - strand, within CA264_17295 at 4023.088 kb on + strand, within CA264_17295 at 4023.298 kb on + strand, within CA264_17295 at 4023.371 kb on - strand, within CA264_17295 at 4023.381 kb on - strand, within CA264_17295 at 4023.384 kb on + strand, within CA264_17295 at 4023.400 kb on + strand, within CA264_17295 at 4023.400 kb on + strand, within CA264_17295 at 4023.401 kb on - strand, within CA264_17295 at 4023.401 kb on - strand, within CA264_17295 at 4023.401 kb on - strand, within CA264_17295 at 4023.403 kb on + strand, within CA264_17295 at 4023.403 kb on + strand, within CA264_17295 at 4023.404 kb on - strand, within CA264_17295 at 4023.447 kb on + strand, within CA264_17295 at 4023.512 kb on + strand, within CA264_17295 at 4023.513 kb on - strand, within CA264_17295 at 4023.534 kb on + strand, within CA264_17295 at 4023.623 kb on + strand, within CA264_17295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,021,173 + CA264_17285 0.65 +1.5 4,021,800 + -0.6 4,021,806 + -0.5 4,021,806 + -0.7 4,021,814 + +0.4 4,021,814 + -1.1 4,021,823 + +0.1 4,021,823 + +0.1 4,021,824 - +1.1 4,021,884 + -0.4 4,021,980 + CA264_17290 0.18 -0.5 4,021,988 + CA264_17290 0.19 -0.8 4,021,991 + CA264_17290 0.20 -0.8 4,021,991 + CA264_17290 0.20 -0.8 4,021,991 + CA264_17290 0.20 -0.5 4,021,991 + CA264_17290 0.20 -0.3 4,021,992 - CA264_17290 0.20 -0.6 4,022,006 + CA264_17290 0.21 -0.7 4,022,071 + CA264_17290 0.29 +0.1 4,022,130 + CA264_17290 0.35 -0.6 4,022,130 + CA264_17290 0.35 -0.2 4,022,131 - CA264_17290 0.35 -1.8 4,022,200 - CA264_17290 0.43 -0.5 4,022,273 - CA264_17290 0.51 -3.5 4,022,274 + CA264_17290 0.51 -0.4 4,022,275 - CA264_17290 0.52 -0.0 4,022,275 - CA264_17290 0.52 +0.5 4,022,329 + CA264_17290 0.58 -0.2 4,022,330 - CA264_17290 0.58 -0.2 4,022,391 + CA264_17290 0.65 -0.1 4,022,392 - CA264_17290 0.65 -1.0 4,022,392 - CA264_17290 0.65 +0.2 4,022,429 + CA264_17290 0.69 -0.8 4,022,429 + CA264_17290 0.69 -0.6 4,022,471 + CA264_17290 0.74 -0.5 4,022,515 + CA264_17290 0.79 -1.2 4,022,536 - CA264_17290 0.81 +0.9 4,022,574 + CA264_17290 0.85 +0.7 4,022,645 + +0.5 4,022,686 + -0.7 4,022,702 + -0.5 4,022,705 + +0.8 4,022,705 + +0.4 4,022,733 + +0.1 4,022,733 + +0.3 4,022,766 - -0.3 4,022,787 - -0.0 4,022,790 - -0.6 4,022,891 + -1.7 4,022,929 - +0.2 4,022,973 + CA264_17295 0.12 -1.1 4,022,973 + CA264_17295 0.12 -0.8 4,022,974 - CA264_17295 0.12 -3.3 4,022,974 - CA264_17295 0.12 -4.1 4,022,974 - CA264_17295 0.12 -5.1 4,023,007 - CA264_17295 0.14 -1.7 4,023,088 + CA264_17295 0.19 -3.0 4,023,298 + CA264_17295 0.32 -2.2 4,023,371 - CA264_17295 0.37 -2.3 4,023,381 - CA264_17295 0.37 -2.1 4,023,384 + CA264_17295 0.38 -3.5 4,023,400 + CA264_17295 0.39 -3.6 4,023,400 + CA264_17295 0.39 -2.9 4,023,401 - CA264_17295 0.39 -2.0 4,023,401 - CA264_17295 0.39 -1.9 4,023,401 - CA264_17295 0.39 -0.3 4,023,403 + CA264_17295 0.39 -1.1 4,023,403 + CA264_17295 0.39 -3.0 4,023,404 - CA264_17295 0.39 -1.0 4,023,447 + CA264_17295 0.41 -3.9 4,023,512 + CA264_17295 0.45 -2.9 4,023,513 - CA264_17295 0.46 +0.5 4,023,534 + CA264_17295 0.47 -0.5 4,023,623 + CA264_17295 0.52 -1.8
Or see this region's nucleotide sequence