Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16850 and CA264_16855 are separated by 69 nucleotides CA264_16855 and CA264_16860 are separated by 190 nucleotides CA264_16860 and CA264_16865 are separated by 67 nucleotides CA264_16865 and CA264_16870 are separated by 250 nucleotides CA264_16870 and CA264_16875 overlap by 4 nucleotides
CA264_16850: CA264_16850 - hypothetical protein, at 3,932,685 to 3,933,071
_16850
CA264_16855: CA264_16855 - hypothetical protein, at 3,933,141 to 3,933,380
_16855
CA264_16860: CA264_16860 - hypothetical protein, at 3,933,571 to 3,933,750
_16860
CA264_16865: CA264_16865 - hypothetical protein, at 3,933,818 to 3,934,045
_16865
CA264_16870: CA264_16870 - N-acetyltransferase, at 3,934,296 to 3,934,631
_16870
CA264_16875: CA264_16875 - hypothetical protein, at 3,934,628 to 3,934,933
_16875
Position (kb)
3933
3934 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3932.576 kb on - strand at 3932.604 kb on + strand at 3932.605 kb on - strand at 3932.652 kb on - strand at 3932.653 kb on + strand at 3932.653 kb on + strand at 3932.654 kb on - strand at 3932.654 kb on - strand at 3932.654 kb on - strand at 3932.696 kb on - strand at 3932.696 kb on - strand at 3932.703 kb on - strand at 3932.744 kb on - strand, within CA264_16850 at 3932.775 kb on + strand, within CA264_16850 at 3932.779 kb on + strand, within CA264_16850 at 3932.779 kb on + strand, within CA264_16850 at 3932.783 kb on + strand, within CA264_16850 at 3932.784 kb on - strand, within CA264_16850 at 3932.810 kb on + strand, within CA264_16850 at 3932.811 kb on - strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.812 kb on + strand, within CA264_16850 at 3932.813 kb on - strand, within CA264_16850 at 3932.819 kb on - strand, within CA264_16850 at 3932.819 kb on - strand, within CA264_16850 at 3932.875 kb on + strand, within CA264_16850 at 3932.928 kb on - strand, within CA264_16850 at 3932.945 kb on + strand, within CA264_16850 at 3932.946 kb on - strand, within CA264_16850 at 3933.004 kb on + strand, within CA264_16850 at 3933.022 kb on - strand, within CA264_16850 at 3933.070 kb on - strand at 3933.078 kb on - strand at 3933.130 kb on - strand at 3933.144 kb on + strand at 3933.261 kb on + strand, within CA264_16855 at 3933.261 kb on + strand, within CA264_16855 at 3933.293 kb on - strand, within CA264_16855 at 3933.398 kb on + strand at 3933.398 kb on + strand at 3933.398 kb on + strand at 3933.420 kb on + strand at 3933.421 kb on - strand at 3933.422 kb on + strand at 3933.422 kb on + strand at 3933.425 kb on + strand at 3933.425 kb on + strand at 3933.426 kb on - strand at 3933.426 kb on - strand at 3933.427 kb on + strand at 3933.427 kb on + strand at 3933.427 kb on + strand at 3933.428 kb on - strand at 3933.428 kb on - strand at 3933.538 kb on - strand at 3933.538 kb on - strand at 3933.613 kb on + strand, within CA264_16860 at 3933.614 kb on - strand, within CA264_16860 at 3933.614 kb on - strand, within CA264_16860 at 3933.615 kb on + strand, within CA264_16860 at 3933.656 kb on + strand, within CA264_16860 at 3933.656 kb on + strand, within CA264_16860 at 3933.657 kb on - strand, within CA264_16860 at 3933.657 kb on - strand, within CA264_16860 at 3933.712 kb on + strand, within CA264_16860 at 3933.713 kb on - strand, within CA264_16860 at 3933.728 kb on + strand, within CA264_16860 at 3933.731 kb on + strand, within CA264_16860 at 3933.770 kb on + strand at 3933.771 kb on - strand at 3933.771 kb on - strand at 3933.860 kb on + strand, within CA264_16865 at 3933.862 kb on + strand, within CA264_16865 at 3933.863 kb on - strand, within CA264_16865 at 3934.166 kb on - strand at 3934.187 kb on + strand at 3934.188 kb on - strand at 3934.188 kb on - strand at 3934.258 kb on - strand at 3934.282 kb on - strand at 3934.286 kb on - strand at 3934.287 kb on + strand at 3934.287 kb on + strand at 3934.335 kb on + strand, within CA264_16870 at 3934.335 kb on + strand, within CA264_16870 at 3934.336 kb on - strand, within CA264_16870 at 3934.381 kb on + strand, within CA264_16870 at 3934.382 kb on - strand, within CA264_16870 at 3934.543 kb on - strand, within CA264_16870 at 3934.593 kb on - strand, within CA264_16870 at 3934.613 kb on + strand at 3934.731 kb on + strand, within CA264_16875 at 3934.731 kb on + strand, within CA264_16875 at 3934.731 kb on + strand, within CA264_16875 at 3934.732 kb on - strand, within CA264_16875
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,932,576 - +1.0 3,932,604 + -0.5 3,932,605 - -0.4 3,932,652 - -0.5 3,932,653 + -0.0 3,932,653 + -0.6 3,932,654 - +0.1 3,932,654 - +0.8 3,932,654 - -0.3 3,932,696 - +1.1 3,932,696 - +0.6 3,932,703 - -0.5 3,932,744 - CA264_16850 0.15 +0.0 3,932,775 + CA264_16850 0.23 -0.1 3,932,779 + CA264_16850 0.24 -0.5 3,932,779 + CA264_16850 0.24 -0.6 3,932,783 + CA264_16850 0.25 +1.0 3,932,784 - CA264_16850 0.26 -0.4 3,932,810 + CA264_16850 0.32 -0.9 3,932,811 - CA264_16850 0.33 +0.0 3,932,812 + CA264_16850 0.33 -0.2 3,932,812 + CA264_16850 0.33 +0.5 3,932,812 + CA264_16850 0.33 -0.1 3,932,812 + CA264_16850 0.33 -0.3 3,932,813 - CA264_16850 0.33 -0.6 3,932,819 - CA264_16850 0.35 -0.2 3,932,819 - CA264_16850 0.35 -0.2 3,932,875 + CA264_16850 0.49 +0.2 3,932,928 - CA264_16850 0.63 -0.4 3,932,945 + CA264_16850 0.67 +0.9 3,932,946 - CA264_16850 0.67 +0.1 3,933,004 + CA264_16850 0.82 -2.2 3,933,022 - CA264_16850 0.87 +0.4 3,933,070 - -0.9 3,933,078 - -0.4 3,933,130 - +0.3 3,933,144 + -0.6 3,933,261 + CA264_16855 0.50 +0.1 3,933,261 + CA264_16855 0.50 -0.1 3,933,293 - CA264_16855 0.63 -0.1 3,933,398 + -0.0 3,933,398 + -0.7 3,933,398 + -1.2 3,933,420 + +0.8 3,933,421 - +0.2 3,933,422 + +1.3 3,933,422 + +0.1 3,933,425 + -0.2 3,933,425 + +0.3 3,933,426 - +0.7 3,933,426 - +0.8 3,933,427 + +0.2 3,933,427 + +0.5 3,933,427 + +0.2 3,933,428 - -0.2 3,933,428 - +0.2 3,933,538 - -0.1 3,933,538 - +1.0 3,933,613 + CA264_16860 0.23 -0.3 3,933,614 - CA264_16860 0.24 +0.6 3,933,614 - CA264_16860 0.24 +0.3 3,933,615 + CA264_16860 0.24 -1.1 3,933,656 + CA264_16860 0.47 -0.4 3,933,656 + CA264_16860 0.47 -0.2 3,933,657 - CA264_16860 0.48 +0.3 3,933,657 - CA264_16860 0.48 +0.6 3,933,712 + CA264_16860 0.78 -1.0 3,933,713 - CA264_16860 0.79 +0.9 3,933,728 + CA264_16860 0.87 -1.0 3,933,731 + CA264_16860 0.89 +0.2 3,933,770 + -1.3 3,933,771 - -0.7 3,933,771 - -0.2 3,933,860 + CA264_16865 0.18 -0.4 3,933,862 + CA264_16865 0.19 -1.5 3,933,863 - CA264_16865 0.20 -0.1 3,934,166 - -0.2 3,934,187 + +0.0 3,934,188 - -1.1 3,934,188 - -0.8 3,934,258 - -0.4 3,934,282 - -0.5 3,934,286 - +2.2 3,934,287 + +1.1 3,934,287 + -0.4 3,934,335 + CA264_16870 0.12 +2.2 3,934,335 + CA264_16870 0.12 +0.1 3,934,336 - CA264_16870 0.12 -0.4 3,934,381 + CA264_16870 0.25 -0.0 3,934,382 - CA264_16870 0.26 -0.5 3,934,543 - CA264_16870 0.74 -0.2 3,934,593 - CA264_16870 0.88 -0.4 3,934,613 + -0.6 3,934,731 + CA264_16875 0.34 -1.0 3,934,731 + CA264_16875 0.34 +0.0 3,934,731 + CA264_16875 0.34 +0.9 3,934,732 - CA264_16875 0.34 -0.0
Or see this region's nucleotide sequence