Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16800

Experiment: m.b. Cobalt chloride 0.3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_16795 and CA264_16800 are separated by 626 nucleotidesCA264_16800 and CA264_16805 are separated by 376 nucleotides CA264_16795: CA264_16795 - 50S ribosomal protein L21, at 3,918,501 to 3,918,809 _16795 CA264_16800: CA264_16800 - ribonucleoside-diphosphate reductase, at 3,919,436 to 3,920,395 _16800 CA264_16805: CA264_16805 - ribonucleoside-diphosphate reductase subunit alpha, at 3,920,772 to 3,923,156 _16805 Position (kb) 3919 3920 3921Strain fitness (log2 ratio) -2 -1 0 1at 3918.940 kb on + strandat 3918.940 kb on + strandat 3919.311 kb on + strandat 3919.313 kb on + strandat 3919.369 kb on - strandat 3920.407 kb on - strandat 3920.414 kb on - strandat 3920.420 kb on - strandat 3920.467 kb on - strandat 3920.474 kb on + strandat 3920.588 kb on - strandat 3920.590 kb on - strandat 3920.591 kb on + strandat 3920.626 kb on + strandat 3920.641 kb on + strandat 3920.649 kb on + strandat 3920.718 kb on - strandat 3920.718 kb on - strandat 3920.718 kb on - strandat 3920.719 kb on + strandat 3920.719 kb on + strandat 3920.720 kb on - strandat 3920.720 kb on - strandat 3920.722 kb on - strandat 3920.722 kb on - strandat 3920.728 kb on + strandat 3920.764 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM
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3,918,940 + -0.8
3,918,940 + -1.0
3,919,311 + -1.2
3,919,313 + -0.2
3,919,369 - -0.1
3,920,407 - -0.5
3,920,414 - +0.6
3,920,420 - +1.1
3,920,467 - -0.8
3,920,474 + -0.0
3,920,588 - -0.2
3,920,590 - -0.3
3,920,591 + +1.2
3,920,626 + +0.1
3,920,641 + -1.2
3,920,649 + +0.8
3,920,718 - +0.1
3,920,718 - -0.4
3,920,718 - -1.4
3,920,719 + -0.4
3,920,719 + -0.5
3,920,720 - -0.6
3,920,720 - -0.5
3,920,722 - +0.5
3,920,722 - -2.0
3,920,728 + +0.3
3,920,764 + -0.4

Or see this region's nucleotide sequence