Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14590 and CA264_14595 are separated by 549 nucleotides CA264_14595 and CA264_14600 are separated by 170 nucleotides
CA264_14590: CA264_14590 - phosphoribosylformylglycinamidine synthase I, at 3,429,501 to 3,430,193
_14590
CA264_14595: CA264_14595 - sodium-independent anion transporter, at 3,430,743 to 3,432,284
_14595
CA264_14600: CA264_14600 - serine hydrolase, at 3,432,455 to 3,433,606
_14600
Position (kb)
3430
3431
3432
3433 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3429.846 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.847 kb on - strand, within CA264_14590 at 3429.847 kb on - strand, within CA264_14590 at 3429.906 kb on + strand, within CA264_14590 at 3429.906 kb on + strand, within CA264_14590 at 3430.000 kb on - strand, within CA264_14590 at 3430.170 kb on - strand at 3430.181 kb on - strand at 3430.201 kb on + strand at 3430.220 kb on + strand at 3430.248 kb on - strand at 3430.289 kb on + strand at 3430.290 kb on - strand at 3430.372 kb on + strand at 3430.373 kb on - strand at 3430.434 kb on + strand at 3430.443 kb on + strand at 3430.444 kb on - strand at 3430.448 kb on - strand at 3430.464 kb on + strand at 3430.465 kb on - strand at 3430.465 kb on - strand at 3430.466 kb on + strand at 3430.466 kb on + strand at 3430.467 kb on - strand at 3430.496 kb on + strand at 3430.507 kb on - strand at 3430.518 kb on + strand at 3430.518 kb on + strand at 3430.519 kb on - strand at 3430.519 kb on - strand at 3430.521 kb on - strand at 3430.536 kb on - strand at 3430.641 kb on + strand at 3430.643 kb on + strand at 3430.644 kb on - strand at 3430.644 kb on - strand at 3430.723 kb on + strand at 3430.728 kb on + strand at 3430.737 kb on - strand at 3430.737 kb on - strand at 3430.791 kb on - strand at 3430.791 kb on - strand at 3430.795 kb on + strand at 3430.902 kb on - strand, within CA264_14595 at 3430.913 kb on - strand, within CA264_14595 at 3430.917 kb on - strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.113 kb on - strand, within CA264_14595 at 3431.113 kb on - strand, within CA264_14595 at 3431.113 kb on - strand, within CA264_14595 at 3431.179 kb on + strand, within CA264_14595 at 3431.246 kb on + strand, within CA264_14595 at 3431.246 kb on + strand, within CA264_14595 at 3431.246 kb on + strand, within CA264_14595 at 3431.246 kb on + strand, within CA264_14595 at 3431.247 kb on - strand, within CA264_14595 at 3431.247 kb on - strand, within CA264_14595 at 3431.264 kb on - strand, within CA264_14595 at 3431.340 kb on - strand, within CA264_14595 at 3431.684 kb on + strand, within CA264_14595 at 3431.702 kb on - strand, within CA264_14595 at 3431.702 kb on - strand, within CA264_14595 at 3431.757 kb on - strand, within CA264_14595 at 3431.903 kb on + strand, within CA264_14595 at 3431.961 kb on + strand, within CA264_14595 at 3431.961 kb on + strand, within CA264_14595 at 3431.962 kb on - strand, within CA264_14595 at 3431.980 kb on + strand, within CA264_14595 at 3431.981 kb on - strand, within CA264_14595 at 3431.988 kb on + strand, within CA264_14595 at 3431.988 kb on + strand, within CA264_14595 at 3431.989 kb on - strand, within CA264_14595 at 3432.181 kb on + strand at 3432.194 kb on + strand at 3432.195 kb on - strand at 3432.200 kb on - strand at 3432.236 kb on + strand at 3432.236 kb on + strand at 3432.237 kb on - strand at 3432.237 kb on - strand at 3432.272 kb on + strand at 3432.272 kb on + strand at 3432.272 kb on + strand at 3432.287 kb on + strand at 3432.288 kb on - strand at 3432.291 kb on + strand at 3432.291 kb on + strand at 3432.292 kb on - strand at 3432.292 kb on - strand at 3432.298 kb on - strand at 3432.303 kb on - strand at 3432.430 kb on + strand at 3432.435 kb on + strand at 3432.435 kb on + strand at 3432.435 kb on + strand at 3432.436 kb on - strand at 3432.440 kb on + strand at 3432.456 kb on + strand at 3432.456 kb on + strand at 3432.457 kb on - strand at 3432.469 kb on + strand at 3432.469 kb on + strand at 3432.469 kb on + strand at 3432.469 kb on + strand at 3432.470 kb on - strand at 3432.494 kb on + strand at 3432.577 kb on + strand, within CA264_14600 at 3432.577 kb on + strand, within CA264_14600 at 3432.580 kb on + strand, within CA264_14600 at 3432.580 kb on + strand, within CA264_14600 at 3432.580 kb on + strand, within CA264_14600 at 3432.580 kb on + strand, within CA264_14600 at 3432.582 kb on + strand, within CA264_14600 at 3432.582 kb on + strand, within CA264_14600 at 3432.584 kb on - strand, within CA264_14600 at 3432.595 kb on + strand, within CA264_14600 at 3432.596 kb on - strand, within CA264_14600 at 3432.606 kb on + strand, within CA264_14600 at 3432.607 kb on - strand, within CA264_14600 at 3432.657 kb on + strand, within CA264_14600 at 3432.723 kb on + strand, within CA264_14600 at 3432.724 kb on - strand, within CA264_14600 at 3432.771 kb on + strand, within CA264_14600 at 3432.773 kb on + strand, within CA264_14600 at 3432.773 kb on + strand, within CA264_14600 at 3432.836 kb on - strand, within CA264_14600 at 3432.909 kb on + strand, within CA264_14600 at 3433.047 kb on + strand, within CA264_14600 at 3433.084 kb on - strand, within CA264_14600 at 3433.136 kb on + strand, within CA264_14600 at 3433.136 kb on + strand, within CA264_14600 at 3433.137 kb on - strand, within CA264_14600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,429,846 + CA264_14590 0.50 +1.6 3,429,846 + CA264_14590 0.50 +0.3 3,429,846 + CA264_14590 0.50 -0.9 3,429,847 - CA264_14590 0.50 +0.3 3,429,847 - CA264_14590 0.50 -0.4 3,429,906 + CA264_14590 0.58 +0.0 3,429,906 + CA264_14590 0.58 -0.7 3,430,000 - CA264_14590 0.72 -0.3 3,430,170 - -0.2 3,430,181 - -0.5 3,430,201 + -1.0 3,430,220 + -1.6 3,430,248 - -0.4 3,430,289 + -1.2 3,430,290 - -0.5 3,430,372 + -1.1 3,430,373 - -0.6 3,430,434 + -0.4 3,430,443 + -1.1 3,430,444 - -0.4 3,430,448 - -0.2 3,430,464 + -0.7 3,430,465 - +0.3 3,430,465 - -0.4 3,430,466 + -0.6 3,430,466 + -0.1 3,430,467 - -0.4 3,430,496 + -1.6 3,430,507 - +0.8 3,430,518 + +0.2 3,430,518 + -0.7 3,430,519 - -1.4 3,430,519 - +0.1 3,430,521 - +0.1 3,430,536 - -0.4 3,430,641 + +0.1 3,430,643 + -1.0 3,430,644 - -0.6 3,430,644 - -0.7 3,430,723 + -0.2 3,430,728 + -1.3 3,430,737 - +0.3 3,430,737 - -0.3 3,430,791 - +0.1 3,430,791 - +0.3 3,430,795 + -0.6 3,430,902 - CA264_14595 0.10 -2.0 3,430,913 - CA264_14595 0.11 +2.0 3,430,917 - CA264_14595 0.11 +0.3 3,431,112 + CA264_14595 0.24 -0.3 3,431,112 + CA264_14595 0.24 +0.6 3,431,112 + CA264_14595 0.24 -0.1 3,431,112 + CA264_14595 0.24 +0.1 3,431,113 - CA264_14595 0.24 -0.5 3,431,113 - CA264_14595 0.24 +0.3 3,431,113 - CA264_14595 0.24 -0.3 3,431,179 + CA264_14595 0.28 -0.2 3,431,246 + CA264_14595 0.33 +0.8 3,431,246 + CA264_14595 0.33 -0.3 3,431,246 + CA264_14595 0.33 +0.7 3,431,246 + CA264_14595 0.33 +1.6 3,431,247 - CA264_14595 0.33 -0.9 3,431,247 - CA264_14595 0.33 +0.2 3,431,264 - CA264_14595 0.34 +0.4 3,431,340 - CA264_14595 0.39 -0.4 3,431,684 + CA264_14595 0.61 +0.1 3,431,702 - CA264_14595 0.62 -0.5 3,431,702 - CA264_14595 0.62 -0.2 3,431,757 - CA264_14595 0.66 -1.1 3,431,903 + CA264_14595 0.75 -0.1 3,431,961 + CA264_14595 0.79 +0.2 3,431,961 + CA264_14595 0.79 +0.1 3,431,962 - CA264_14595 0.79 +1.2 3,431,980 + CA264_14595 0.80 -0.1 3,431,981 - CA264_14595 0.80 -1.1 3,431,988 + CA264_14595 0.81 +0.3 3,431,988 + CA264_14595 0.81 -0.5 3,431,989 - CA264_14595 0.81 -0.2 3,432,181 + -0.6 3,432,194 + -0.7 3,432,195 - +0.2 3,432,200 - +0.6 3,432,236 + +0.2 3,432,236 + +0.0 3,432,237 - -0.5 3,432,237 - -0.1 3,432,272 + -1.1 3,432,272 + +0.1 3,432,272 + -0.2 3,432,287 + -0.6 3,432,288 - +0.5 3,432,291 + +0.2 3,432,291 + -1.4 3,432,292 - -0.9 3,432,292 - -0.8 3,432,298 - +1.1 3,432,303 - +0.6 3,432,430 + -0.5 3,432,435 + +2.1 3,432,435 + +1.5 3,432,435 + +1.2 3,432,436 - +0.2 3,432,440 + -0.2 3,432,456 + -0.4 3,432,456 + +0.1 3,432,457 - -0.1 3,432,469 + -0.2 3,432,469 + -1.7 3,432,469 + +0.9 3,432,469 + +0.3 3,432,470 - -0.2 3,432,494 + +1.5 3,432,577 + CA264_14600 0.11 -0.5 3,432,577 + CA264_14600 0.11 +1.5 3,432,580 + CA264_14600 0.11 -0.5 3,432,580 + CA264_14600 0.11 +0.7 3,432,580 + CA264_14600 0.11 +0.1 3,432,580 + CA264_14600 0.11 -0.7 3,432,582 + CA264_14600 0.11 -0.2 3,432,582 + CA264_14600 0.11 +0.1 3,432,584 - CA264_14600 0.11 -0.4 3,432,595 + CA264_14600 0.12 -0.5 3,432,596 - CA264_14600 0.12 +0.4 3,432,606 + CA264_14600 0.13 +0.5 3,432,607 - CA264_14600 0.13 +0.7 3,432,657 + CA264_14600 0.18 +0.5 3,432,723 + CA264_14600 0.23 -0.2 3,432,724 - CA264_14600 0.23 +0.4 3,432,771 + CA264_14600 0.27 +0.0 3,432,773 + CA264_14600 0.28 -0.1 3,432,773 + CA264_14600 0.28 +0.2 3,432,836 - CA264_14600 0.33 -0.4 3,432,909 + CA264_14600 0.39 +0.1 3,433,047 + CA264_14600 0.51 -0.4 3,433,084 - CA264_14600 0.55 +0.2 3,433,136 + CA264_14600 0.59 -0.2 3,433,136 + CA264_14600 0.59 +0.1 3,433,137 - CA264_14600 0.59 +0.3
Or see this region's nucleotide sequence