Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13855 and CA264_13860 overlap by 12 nucleotides CA264_13860 and CA264_13865 are separated by 34 nucleotides CA264_13865 and CA264_13870 are separated by 243 nucleotides CA264_13870 and CA264_13875 are separated by 75 nucleotides
CA264_13855: CA264_13855 - UV damage endonuclease UvsE, at 3,236,897 to 3,237,796
_13855
CA264_13860: CA264_13860 - hypothetical protein, at 3,237,785 to 3,238,282
_13860
CA264_13865: CA264_13865 - hypothetical protein, at 3,238,317 to 3,238,565
_13865
CA264_13870: CA264_13870 - hypothetical protein, at 3,238,809 to 3,239,201
_13870
CA264_13875: CA264_13875 - hypothetical protein, at 3,239,277 to 3,240,101
_13875
Position (kb)
3238
3239 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3237.381 kb on - strand, within CA264_13855 at 3237.443 kb on + strand, within CA264_13855 at 3237.446 kb on - strand, within CA264_13855 at 3237.655 kb on + strand, within CA264_13855 at 3237.655 kb on + strand, within CA264_13855 at 3237.658 kb on - strand, within CA264_13855 at 3237.658 kb on - strand, within CA264_13855 at 3237.715 kb on + strand at 3237.715 kb on + strand at 3237.887 kb on - strand, within CA264_13860 at 3237.890 kb on + strand, within CA264_13860 at 3237.891 kb on - strand, within CA264_13860 at 3237.891 kb on - strand, within CA264_13860 at 3238.212 kb on - strand, within CA264_13860 at 3238.260 kb on + strand at 3238.292 kb on + strand at 3238.313 kb on + strand at 3238.399 kb on + strand, within CA264_13865 at 3238.402 kb on + strand, within CA264_13865 at 3238.547 kb on + strand at 3238.554 kb on + strand at 3238.579 kb on + strand at 3238.579 kb on + strand at 3238.580 kb on - strand at 3238.751 kb on + strand at 3238.752 kb on - strand at 3238.752 kb on - strand at 3238.777 kb on + strand at 3238.778 kb on - strand at 3238.810 kb on + strand at 3239.007 kb on - strand, within CA264_13870 at 3239.072 kb on + strand, within CA264_13870 at 3239.074 kb on + strand, within CA264_13870 at 3239.075 kb on - strand, within CA264_13870 at 3239.087 kb on - strand, within CA264_13870 at 3239.126 kb on + strand, within CA264_13870 at 3239.127 kb on - strand, within CA264_13870 at 3239.127 kb on - strand, within CA264_13870 at 3239.153 kb on + strand, within CA264_13870 at 3239.236 kb on + strand at 3239.259 kb on + strand at 3239.377 kb on + strand, within CA264_13875 at 3239.393 kb on - strand, within CA264_13875 at 3239.393 kb on - strand, within CA264_13875 at 3239.473 kb on - strand, within CA264_13875 at 3239.509 kb on + strand, within CA264_13875 at 3239.510 kb on - strand, within CA264_13875 at 3239.522 kb on + strand, within CA264_13875
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,237,381 - CA264_13855 0.54 +0.7 3,237,443 + CA264_13855 0.61 +0.1 3,237,446 - CA264_13855 0.61 -0.8 3,237,655 + CA264_13855 0.84 +0.3 3,237,655 + CA264_13855 0.84 -0.6 3,237,658 - CA264_13855 0.85 -0.0 3,237,658 - CA264_13855 0.85 +0.2 3,237,715 + -0.1 3,237,715 + +0.5 3,237,887 - CA264_13860 0.20 +0.7 3,237,890 + CA264_13860 0.21 +0.4 3,237,891 - CA264_13860 0.21 +2.1 3,237,891 - CA264_13860 0.21 -0.3 3,238,212 - CA264_13860 0.86 -1.2 3,238,260 + -0.2 3,238,292 + -0.1 3,238,313 + -0.1 3,238,399 + CA264_13865 0.33 -1.4 3,238,402 + CA264_13865 0.34 -1.1 3,238,547 + -0.6 3,238,554 + +1.0 3,238,579 + -0.0 3,238,579 + -0.7 3,238,580 - -0.3 3,238,751 + +0.3 3,238,752 - +0.2 3,238,752 - -0.3 3,238,777 + +0.8 3,238,778 - +0.1 3,238,810 + -0.2 3,239,007 - CA264_13870 0.50 +0.2 3,239,072 + CA264_13870 0.67 -0.6 3,239,074 + CA264_13870 0.67 +0.1 3,239,075 - CA264_13870 0.68 -0.2 3,239,087 - CA264_13870 0.71 +1.1 3,239,126 + CA264_13870 0.81 +0.6 3,239,127 - CA264_13870 0.81 +0.3 3,239,127 - CA264_13870 0.81 +0.5 3,239,153 + CA264_13870 0.88 -0.4 3,239,236 + -0.5 3,239,259 + -0.7 3,239,377 + CA264_13875 0.12 -0.0 3,239,393 - CA264_13875 0.14 +0.1 3,239,393 - CA264_13875 0.14 -0.1 3,239,473 - CA264_13875 0.24 +0.0 3,239,509 + CA264_13875 0.28 -0.4 3,239,510 - CA264_13875 0.28 -1.8 3,239,522 + CA264_13875 0.30 +2.2
Or see this region's nucleotide sequence