Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13395 and CA264_13400 are separated by 111 nucleotides CA264_13400 and CA264_13405 are separated by 87 nucleotides
CA264_13395: CA264_13395 - aminopeptidase, at 3,124,049 to 3,124,963
_13395
CA264_13400: CA264_13400 - tol-pal system protein YbgF, at 3,125,075 to 3,126,322
_13400
CA264_13405: CA264_13405 - NAD-dependent dehydratase, at 3,126,410 to 3,127,378
_13405
Position (kb)
3125
3126
3127 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 3124.075 kb on - strand at 3124.088 kb on - strand at 3124.088 kb on - strand at 3124.152 kb on - strand, within CA264_13395 at 3124.234 kb on - strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.405 kb on - strand, within CA264_13395 at 3124.463 kb on - strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.693 kb on - strand, within CA264_13395 at 3124.884 kb on + strand at 3124.889 kb on + strand at 3125.018 kb on + strand at 3125.028 kb on - strand at 3125.030 kb on + strand at 3125.049 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.057 kb on - strand at 3125.057 kb on - strand at 3125.072 kb on + strand at 3125.072 kb on + strand at 3125.127 kb on + strand at 3125.127 kb on + strand at 3125.128 kb on - strand at 3125.175 kb on + strand at 3125.176 kb on - strand at 3125.196 kb on + strand at 3125.217 kb on + strand, within CA264_13400 at 3125.217 kb on + strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.295 kb on - strand, within CA264_13400 at 3125.392 kb on - strand, within CA264_13400 at 3125.442 kb on - strand, within CA264_13400 at 3125.456 kb on - strand, within CA264_13400 at 3125.477 kb on + strand, within CA264_13400 at 3125.478 kb on - strand, within CA264_13400 at 3125.529 kb on - strand, within CA264_13400 at 3125.679 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.812 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.912 kb on + strand, within CA264_13400 at 3125.927 kb on + strand, within CA264_13400 at 3125.928 kb on - strand, within CA264_13400 at 3125.946 kb on + strand, within CA264_13400 at 3126.011 kb on - strand, within CA264_13400 at 3126.051 kb on - strand, within CA264_13400 at 3126.063 kb on - strand, within CA264_13400 at 3126.065 kb on - strand, within CA264_13400 at 3126.065 kb on - strand, within CA264_13400 at 3126.176 kb on + strand, within CA264_13400 at 3126.237 kb on - strand at 3126.262 kb on + strand at 3126.297 kb on - strand at 3126.321 kb on - strand at 3126.329 kb on - strand at 3126.339 kb on - strand at 3126.339 kb on - strand at 3126.341 kb on + strand at 3126.342 kb on - strand at 3126.397 kb on + strand at 3126.397 kb on + strand at 3126.400 kb on + strand at 3126.400 kb on + strand at 3126.408 kb on - strand at 3126.408 kb on - strand at 3126.433 kb on + strand at 3126.434 kb on - strand at 3126.679 kb on - strand, within CA264_13405 at 3126.679 kb on - strand, within CA264_13405 at 3126.727 kb on - strand, within CA264_13405 at 3126.810 kb on - strand, within CA264_13405 at 3126.843 kb on + strand, within CA264_13405 at 3126.894 kb on + strand, within CA264_13405 at 3126.895 kb on - strand, within CA264_13405 at 3126.895 kb on - strand, within CA264_13405 at 3126.937 kb on - strand, within CA264_13405 at 3126.975 kb on + strand, within CA264_13405 at 3127.011 kb on + strand, within CA264_13405 at 3127.165 kb on - strand, within CA264_13405 at 3127.165 kb on - strand, within CA264_13405 at 3127.212 kb on + strand, within CA264_13405 at 3127.213 kb on - strand, within CA264_13405 at 3127.249 kb on + strand, within CA264_13405 at 3127.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,124,075 - -0.5 3,124,088 - -0.4 3,124,088 - -1.2 3,124,152 - CA264_13395 0.11 +0.1 3,124,234 - CA264_13395 0.20 +0.5 3,124,274 + CA264_13395 0.25 +0.3 3,124,274 + CA264_13395 0.25 +0.3 3,124,278 + CA264_13395 0.25 -0.0 3,124,278 + CA264_13395 0.25 +0.3 3,124,358 - CA264_13395 0.34 +1.0 3,124,358 - CA264_13395 0.34 +1.5 3,124,404 + CA264_13395 0.39 -0.9 3,124,404 + CA264_13395 0.39 +0.1 3,124,405 - CA264_13395 0.39 +0.2 3,124,463 - CA264_13395 0.45 -0.3 3,124,614 + CA264_13395 0.62 -0.8 3,124,614 + CA264_13395 0.62 +0.1 3,124,614 + CA264_13395 0.62 -0.1 3,124,614 + CA264_13395 0.62 +0.2 3,124,614 + CA264_13395 0.62 +0.3 3,124,615 - CA264_13395 0.62 +0.0 3,124,615 - CA264_13395 0.62 +0.2 3,124,651 + CA264_13395 0.66 +1.7 3,124,651 + CA264_13395 0.66 -0.3 3,124,693 - CA264_13395 0.70 -0.6 3,124,884 + +0.2 3,124,889 + +0.1 3,125,018 + +0.2 3,125,028 - -0.8 3,125,030 + -0.2 3,125,049 + -0.6 3,125,056 + +0.2 3,125,056 + -1.2 3,125,056 + -0.9 3,125,057 - +0.3 3,125,057 - -0.2 3,125,072 + +0.6 3,125,072 + +2.1 3,125,127 + -0.8 3,125,127 + -0.8 3,125,128 - +0.3 3,125,175 + -0.5 3,125,176 - -1.3 3,125,196 + +1.4 3,125,217 + CA264_13400 0.11 -0.2 3,125,217 + CA264_13400 0.11 +0.2 3,125,283 - CA264_13400 0.17 -0.3 3,125,283 - CA264_13400 0.17 -0.2 3,125,283 - CA264_13400 0.17 -0.6 3,125,283 - CA264_13400 0.17 +0.0 3,125,295 - CA264_13400 0.18 -0.5 3,125,392 - CA264_13400 0.25 -0.7 3,125,442 - CA264_13400 0.29 +1.7 3,125,456 - CA264_13400 0.31 +0.2 3,125,477 + CA264_13400 0.32 -0.0 3,125,478 - CA264_13400 0.32 -0.6 3,125,529 - CA264_13400 0.36 +0.7 3,125,679 - CA264_13400 0.48 +0.2 3,125,708 - CA264_13400 0.51 -0.4 3,125,708 - CA264_13400 0.51 -0.9 3,125,812 + CA264_13400 0.59 -0.8 3,125,893 + CA264_13400 0.66 +0.5 3,125,893 + CA264_13400 0.66 +0.8 3,125,897 + CA264_13400 0.66 -0.7 3,125,897 + CA264_13400 0.66 +0.0 3,125,912 + CA264_13400 0.67 -2.6 3,125,927 + CA264_13400 0.68 -0.2 3,125,928 - CA264_13400 0.68 -0.6 3,125,946 + CA264_13400 0.70 -1.3 3,126,011 - CA264_13400 0.75 +0.2 3,126,051 - CA264_13400 0.78 +0.1 3,126,063 - CA264_13400 0.79 -0.3 3,126,065 - CA264_13400 0.79 -0.1 3,126,065 - CA264_13400 0.79 -0.3 3,126,176 + CA264_13400 0.88 +0.1 3,126,237 - -0.0 3,126,262 + -0.6 3,126,297 - -0.1 3,126,321 - -1.9 3,126,329 - -0.6 3,126,339 - +0.5 3,126,339 - +0.2 3,126,341 + +1.1 3,126,342 - -0.3 3,126,397 + -0.5 3,126,397 + +2.0 3,126,400 + -0.6 3,126,400 + +0.3 3,126,408 - +0.2 3,126,408 - -0.0 3,126,433 + +0.3 3,126,434 - +0.0 3,126,679 - CA264_13405 0.28 -6.1 3,126,679 - CA264_13405 0.28 -3.2 3,126,727 - CA264_13405 0.33 -4.7 3,126,810 - CA264_13405 0.41 -1.2 3,126,843 + CA264_13405 0.45 -1.9 3,126,894 + CA264_13405 0.50 -2.4 3,126,895 - CA264_13405 0.50 -4.5 3,126,895 - CA264_13405 0.50 -1.7 3,126,937 - CA264_13405 0.54 -1.4 3,126,975 + CA264_13405 0.58 -1.9 3,127,011 + CA264_13405 0.62 -1.7 3,127,165 - CA264_13405 0.78 +0.7 3,127,165 - CA264_13405 0.78 -1.6 3,127,212 + CA264_13405 0.83 +0.2 3,127,213 - CA264_13405 0.83 -1.3 3,127,249 + CA264_13405 0.87 -1.7 3,127,297 - -3.3
Or see this region's nucleotide sequence