Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13050 and CA264_13055 are separated by 328 nucleotides CA264_13055 and CA264_13060 are separated by 388 nucleotides CA264_13060 and CA264_13065 are separated by 117 nucleotides
CA264_13050: CA264_13050 - hypothetical protein, at 3,041,709 to 3,042,986
_13050
CA264_13055: CA264_13055 - alpha-glucosidase, at 3,043,315 to 3,045,450
_13055
CA264_13060: CA264_13060 - tRNA-Ser, at 3,045,839 to 3,045,926
_13060
CA264_13065: CA264_13065 - DUF4153 domain-containing protein, at 3,046,044 to 3,047,912
_13065
Position (kb)
3043
3044
3045
3046 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3042.319 kb on + strand, within CA264_13050 at 3042.411 kb on - strand, within CA264_13050 at 3042.411 kb on - strand, within CA264_13050 at 3042.423 kb on - strand, within CA264_13050 at 3042.452 kb on + strand, within CA264_13050 at 3042.452 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.552 kb on + strand, within CA264_13050 at 3042.553 kb on - strand, within CA264_13050 at 3042.638 kb on - strand, within CA264_13050 at 3042.639 kb on + strand, within CA264_13050 at 3042.640 kb on - strand, within CA264_13050 at 3042.679 kb on - strand, within CA264_13050 at 3042.726 kb on - strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.809 kb on - strand, within CA264_13050 at 3042.812 kb on + strand, within CA264_13050 at 3042.813 kb on - strand, within CA264_13050 at 3042.813 kb on - strand, within CA264_13050 at 3042.813 kb on - strand, within CA264_13050 at 3042.839 kb on + strand, within CA264_13050 at 3042.985 kb on - strand at 3042.985 kb on - strand at 3043.155 kb on + strand at 3043.195 kb on + strand at 3043.195 kb on + strand at 3043.244 kb on - strand at 3043.244 kb on - strand at 3043.362 kb on + strand at 3043.366 kb on + strand at 3043.366 kb on + strand at 3043.366 kb on + strand at 3043.414 kb on - strand at 3043.443 kb on - strand at 3043.443 kb on - strand at 3043.487 kb on + strand at 3043.488 kb on - strand at 3043.502 kb on + strand at 3043.574 kb on - strand, within CA264_13055 at 3043.577 kb on + strand, within CA264_13055 at 3043.578 kb on - strand, within CA264_13055 at 3043.578 kb on - strand, within CA264_13055 at 3043.616 kb on - strand, within CA264_13055 at 3043.620 kb on - strand, within CA264_13055 at 3043.647 kb on - strand, within CA264_13055 at 3043.650 kb on + strand, within CA264_13055 at 3043.650 kb on + strand, within CA264_13055 at 3043.651 kb on - strand, within CA264_13055 at 3043.651 kb on - strand, within CA264_13055 at 3043.709 kb on + strand, within CA264_13055 at 3043.710 kb on - strand, within CA264_13055 at 3043.710 kb on - strand, within CA264_13055 at 3043.710 kb on - strand, within CA264_13055 at 3043.748 kb on + strand, within CA264_13055 at 3043.748 kb on + strand, within CA264_13055 at 3043.749 kb on - strand, within CA264_13055 at 3043.756 kb on + strand, within CA264_13055 at 3043.757 kb on - strand, within CA264_13055 at 3043.760 kb on + strand, within CA264_13055 at 3043.760 kb on + strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.763 kb on + strand, within CA264_13055 at 3043.764 kb on - strand, within CA264_13055 at 3043.788 kb on + strand, within CA264_13055 at 3043.814 kb on + strand, within CA264_13055 at 3043.817 kb on + strand, within CA264_13055 at 3043.818 kb on - strand, within CA264_13055 at 3043.849 kb on - strand, within CA264_13055 at 3043.850 kb on + strand, within CA264_13055 at 3043.850 kb on + strand, within CA264_13055 at 3043.851 kb on - strand, within CA264_13055 at 3043.971 kb on - strand, within CA264_13055 at 3044.019 kb on + strand, within CA264_13055 at 3044.027 kb on + strand, within CA264_13055 at 3044.053 kb on + strand, within CA264_13055 at 3044.054 kb on - strand, within CA264_13055 at 3044.054 kb on - strand, within CA264_13055 at 3044.058 kb on - strand, within CA264_13055 at 3044.117 kb on + strand, within CA264_13055 at 3044.118 kb on - strand, within CA264_13055 at 3044.118 kb on - strand, within CA264_13055 at 3044.186 kb on + strand, within CA264_13055 at 3044.186 kb on + strand, within CA264_13055 at 3044.473 kb on + strand, within CA264_13055 at 3044.492 kb on + strand, within CA264_13055 at 3044.516 kb on - strand, within CA264_13055 at 3044.620 kb on + strand, within CA264_13055 at 3044.620 kb on + strand, within CA264_13055 at 3044.621 kb on - strand, within CA264_13055 at 3044.621 kb on - strand, within CA264_13055 at 3044.621 kb on - strand, within CA264_13055 at 3044.730 kb on + strand, within CA264_13055 at 3044.730 kb on + strand, within CA264_13055 at 3044.731 kb on - strand, within CA264_13055 at 3044.731 kb on - strand, within CA264_13055 at 3044.736 kb on + strand at 3044.737 kb on - strand, within CA264_13055 at 3044.801 kb on + strand, within CA264_13055 at 3044.801 kb on + strand, within CA264_13055 at 3044.802 kb on - strand, within CA264_13055 at 3044.802 kb on - strand, within CA264_13055 at 3044.906 kb on - strand, within CA264_13055 at 3044.920 kb on - strand, within CA264_13055 at 3044.920 kb on - strand, within CA264_13055 at 3044.925 kb on + strand, within CA264_13055 at 3044.925 kb on + strand, within CA264_13055 at 3044.926 kb on - strand, within CA264_13055 at 3044.936 kb on + strand, within CA264_13055 at 3044.937 kb on - strand, within CA264_13055 at 3044.937 kb on - strand, within CA264_13055 at 3044.951 kb on + strand, within CA264_13055 at 3044.995 kb on - strand, within CA264_13055 at 3045.152 kb on + strand, within CA264_13055 at 3045.277 kb on + strand at 3045.309 kb on + strand at 3045.310 kb on - strand at 3045.312 kb on - strand at 3045.316 kb on + strand at 3045.316 kb on + strand at 3045.316 kb on + strand at 3045.317 kb on - strand at 3045.317 kb on - strand at 3045.351 kb on + strand at 3045.412 kb on - strand at 3045.479 kb on - strand at 3045.502 kb on - strand at 3045.502 kb on - strand at 3045.502 kb on - strand at 3045.504 kb on - strand at 3045.504 kb on - strand at 3045.543 kb on - strand at 3045.588 kb on - strand at 3045.641 kb on - strand at 3045.681 kb on + strand at 3045.681 kb on + strand at 3045.689 kb on + strand at 3045.828 kb on + strand at 3045.999 kb on + strand at 3046.000 kb on - strand at 3046.108 kb on + strand at 3046.131 kb on + strand at 3046.186 kb on - strand at 3046.186 kb on - strand at 3046.243 kb on - strand, within CA264_13065 at 3046.267 kb on + strand, within CA264_13065 at 3046.274 kb on + strand, within CA264_13065 at 3046.322 kb on + strand, within CA264_13065 at 3046.322 kb on + strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.325 kb on - strand, within CA264_13065 at 3046.325 kb on - strand, within CA264_13065 at 3046.350 kb on + strand, within CA264_13065 at 3046.350 kb on + strand, within CA264_13065 at 3046.351 kb on - strand, within CA264_13065 at 3046.351 kb on - strand, within CA264_13065 at 3046.444 kb on + strand, within CA264_13065 at 3046.445 kb on - strand, within CA264_13065 at 3046.445 kb on - strand, within CA264_13065
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,042,319 + CA264_13050 0.48 +0.7 3,042,411 - CA264_13050 0.55 -0.8 3,042,411 - CA264_13050 0.55 -0.0 3,042,423 - CA264_13050 0.56 -0.8 3,042,452 + CA264_13050 0.58 +0.4 3,042,452 + CA264_13050 0.58 +1.7 3,042,454 + CA264_13050 0.58 -0.0 3,042,454 + CA264_13050 0.58 +0.2 3,042,454 + CA264_13050 0.58 +0.4 3,042,552 + CA264_13050 0.66 -0.5 3,042,553 - CA264_13050 0.66 +0.3 3,042,638 - CA264_13050 0.73 +0.1 3,042,639 + CA264_13050 0.73 +0.0 3,042,640 - CA264_13050 0.73 -0.2 3,042,679 - CA264_13050 0.76 -0.6 3,042,726 - CA264_13050 0.80 -0.3 3,042,808 + CA264_13050 0.86 -0.9 3,042,808 + CA264_13050 0.86 -0.4 3,042,808 + CA264_13050 0.86 -0.2 3,042,808 + CA264_13050 0.86 -0.3 3,042,808 + CA264_13050 0.86 -0.1 3,042,809 - CA264_13050 0.86 +0.2 3,042,812 + CA264_13050 0.86 +0.1 3,042,813 - CA264_13050 0.86 +0.5 3,042,813 - CA264_13050 0.86 +0.2 3,042,813 - CA264_13050 0.86 +1.2 3,042,839 + CA264_13050 0.88 -2.1 3,042,985 - -0.5 3,042,985 - -0.1 3,043,155 + +0.0 3,043,195 + -0.7 3,043,195 + +0.7 3,043,244 - -0.1 3,043,244 - -0.0 3,043,362 + -0.2 3,043,366 + +0.3 3,043,366 + -0.9 3,043,366 + -0.5 3,043,414 - -0.6 3,043,443 - +0.5 3,043,443 - +0.9 3,043,487 + +0.4 3,043,488 - -0.3 3,043,502 + +0.2 3,043,574 - CA264_13055 0.12 -0.4 3,043,577 + CA264_13055 0.12 -0.2 3,043,578 - CA264_13055 0.12 +0.0 3,043,578 - CA264_13055 0.12 -0.5 3,043,616 - CA264_13055 0.14 -0.8 3,043,620 - CA264_13055 0.14 -0.1 3,043,647 - CA264_13055 0.16 +1.2 3,043,650 + CA264_13055 0.16 +1.9 3,043,650 + CA264_13055 0.16 +0.2 3,043,651 - CA264_13055 0.16 +1.0 3,043,651 - CA264_13055 0.16 -0.6 3,043,709 + CA264_13055 0.18 +0.2 3,043,710 - CA264_13055 0.18 +0.3 3,043,710 - CA264_13055 0.18 +0.6 3,043,710 - CA264_13055 0.18 -0.1 3,043,748 + CA264_13055 0.20 +0.9 3,043,748 + CA264_13055 0.20 -0.1 3,043,749 - CA264_13055 0.20 +0.2 3,043,756 + CA264_13055 0.21 +0.1 3,043,757 - CA264_13055 0.21 -1.4 3,043,760 + CA264_13055 0.21 -0.2 3,043,760 + CA264_13055 0.21 -0.1 3,043,761 - CA264_13055 0.21 +0.1 3,043,761 - CA264_13055 0.21 -0.3 3,043,761 - CA264_13055 0.21 +0.1 3,043,761 - CA264_13055 0.21 -0.4 3,043,761 - CA264_13055 0.21 +0.2 3,043,763 + CA264_13055 0.21 -0.2 3,043,764 - CA264_13055 0.21 -0.5 3,043,788 + CA264_13055 0.22 -0.2 3,043,814 + CA264_13055 0.23 -0.1 3,043,817 + CA264_13055 0.24 +0.3 3,043,818 - CA264_13055 0.24 -0.7 3,043,849 - CA264_13055 0.25 -0.7 3,043,850 + CA264_13055 0.25 -0.5 3,043,850 + CA264_13055 0.25 -0.5 3,043,851 - CA264_13055 0.25 +0.4 3,043,971 - CA264_13055 0.31 +0.1 3,044,019 + CA264_13055 0.33 +0.4 3,044,027 + CA264_13055 0.33 -0.1 3,044,053 + CA264_13055 0.35 -0.9 3,044,054 - CA264_13055 0.35 -1.0 3,044,054 - CA264_13055 0.35 +0.4 3,044,058 - CA264_13055 0.35 +0.8 3,044,117 + CA264_13055 0.38 -1.2 3,044,118 - CA264_13055 0.38 +0.1 3,044,118 - CA264_13055 0.38 -0.0 3,044,186 + CA264_13055 0.41 +0.2 3,044,186 + CA264_13055 0.41 -0.9 3,044,473 + CA264_13055 0.54 +0.1 3,044,492 + CA264_13055 0.55 +0.4 3,044,516 - CA264_13055 0.56 -0.8 3,044,620 + CA264_13055 0.61 +0.4 3,044,620 + CA264_13055 0.61 -0.4 3,044,621 - CA264_13055 0.61 -0.7 3,044,621 - CA264_13055 0.61 -0.2 3,044,621 - CA264_13055 0.61 -1.4 3,044,730 + CA264_13055 0.66 +0.7 3,044,730 + CA264_13055 0.66 -0.6 3,044,731 - CA264_13055 0.66 +0.3 3,044,731 - CA264_13055 0.66 -0.2 3,044,736 + +0.9 3,044,737 - CA264_13055 0.67 +0.6 3,044,801 + CA264_13055 0.70 -1.1 3,044,801 + CA264_13055 0.70 -0.2 3,044,802 - CA264_13055 0.70 -0.6 3,044,802 - CA264_13055 0.70 +0.4 3,044,906 - CA264_13055 0.74 -0.7 3,044,920 - CA264_13055 0.75 -0.1 3,044,920 - CA264_13055 0.75 -0.2 3,044,925 + CA264_13055 0.75 +0.4 3,044,925 + CA264_13055 0.75 -0.1 3,044,926 - CA264_13055 0.75 +0.4 3,044,936 + CA264_13055 0.76 +0.2 3,044,937 - CA264_13055 0.76 -0.1 3,044,937 - CA264_13055 0.76 -0.4 3,044,951 + CA264_13055 0.77 -0.4 3,044,995 - CA264_13055 0.79 -0.9 3,045,152 + CA264_13055 0.86 -0.2 3,045,277 + +0.2 3,045,309 + -0.1 3,045,310 - +0.7 3,045,312 - -2.3 3,045,316 + -0.1 3,045,316 + -0.1 3,045,316 + +0.8 3,045,317 - +0.1 3,045,317 - +0.2 3,045,351 + +1.1 3,045,412 - -0.4 3,045,479 - -0.5 3,045,502 - -0.3 3,045,502 - -1.2 3,045,502 - +0.1 3,045,504 - -0.8 3,045,504 - +1.9 3,045,543 - -3.2 3,045,588 - -2.3 3,045,641 - +0.7 3,045,681 + -1.6 3,045,681 + -0.3 3,045,689 + -0.5 3,045,828 + +0.3 3,045,999 + -0.9 3,046,000 - -0.5 3,046,108 + -1.1 3,046,131 + +0.0 3,046,186 - -0.5 3,046,186 - -1.2 3,046,243 - CA264_13065 0.11 +0.4 3,046,267 + CA264_13065 0.12 -1.4 3,046,274 + CA264_13065 0.12 +0.6 3,046,322 + CA264_13065 0.15 +0.1 3,046,322 + CA264_13065 0.15 -0.7 3,046,323 - CA264_13065 0.15 -0.0 3,046,323 - CA264_13065 0.15 +0.5 3,046,323 - CA264_13065 0.15 +0.5 3,046,323 - CA264_13065 0.15 -1.1 3,046,325 - CA264_13065 0.15 +0.1 3,046,325 - CA264_13065 0.15 +0.6 3,046,350 + CA264_13065 0.16 +0.3 3,046,350 + CA264_13065 0.16 +1.3 3,046,351 - CA264_13065 0.16 +0.1 3,046,351 - CA264_13065 0.16 -0.8 3,046,444 + CA264_13065 0.21 -0.9 3,046,445 - CA264_13065 0.21 +1.0 3,046,445 - CA264_13065 0.21 -0.4
Or see this region's nucleotide sequence