Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12590 and CA264_12595 are separated by 69 nucleotides CA264_12595 and CA264_12600 are separated by 1 nucleotides CA264_12600 and CA264_12605 are separated by 163 nucleotides
CA264_12590: CA264_12590 - hypothetical protein, at 2,938,300 to 2,939,556
_12590
CA264_12595: CA264_12595 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 2,939,626 to 2,940,153
_12595
CA264_12600: CA264_12600 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 2,940,155 to 2,941,285
_12600
CA264_12605: CA264_12605 - stress protection protein MarC, at 2,941,449 to 2,942,069
_12605
Position (kb)
2940
2941
2942 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2939.164 kb on - strand, within CA264_12590 at 2939.200 kb on - strand, within CA264_12590 at 2939.243 kb on + strand, within CA264_12590 at 2939.243 kb on + strand, within CA264_12590 at 2939.243 kb on + strand, within CA264_12590 at 2939.244 kb on - strand, within CA264_12590 at 2939.244 kb on - strand, within CA264_12590 at 2939.244 kb on - strand, within CA264_12590 at 2939.252 kb on - strand, within CA264_12590 at 2939.257 kb on - strand, within CA264_12590 at 2939.303 kb on + strand, within CA264_12590 at 2939.331 kb on + strand, within CA264_12590 at 2939.332 kb on - strand, within CA264_12590 at 2939.332 kb on - strand, within CA264_12590 at 2939.332 kb on - strand, within CA264_12590 at 2939.392 kb on - strand, within CA264_12590 at 2939.431 kb on + strand at 2939.487 kb on + strand at 2939.487 kb on + strand at 2939.487 kb on + strand at 2939.530 kb on + strand at 2939.531 kb on - strand at 2939.571 kb on - strand at 2939.589 kb on + strand at 2939.594 kb on + strand at 2939.617 kb on + strand at 2939.618 kb on - strand at 2939.633 kb on - strand at 2939.653 kb on + strand at 2939.758 kb on + strand, within CA264_12595 at 2939.759 kb on - strand, within CA264_12595 at 2939.759 kb on - strand, within CA264_12595 at 2939.869 kb on - strand, within CA264_12595 at 2940.156 kb on + strand at 2940.156 kb on + strand at 2940.156 kb on + strand at 2940.288 kb on + strand, within CA264_12600 at 2940.289 kb on - strand, within CA264_12600 at 2940.346 kb on - strand, within CA264_12600 at 2940.442 kb on - strand, within CA264_12600 at 2940.451 kb on + strand, within CA264_12600 at 2940.451 kb on + strand, within CA264_12600 at 2940.451 kb on + strand, within CA264_12600 at 2940.451 kb on + strand, within CA264_12600 at 2940.452 kb on - strand, within CA264_12600 at 2940.454 kb on - strand, within CA264_12600 at 2940.484 kb on + strand, within CA264_12600 at 2940.509 kb on + strand, within CA264_12600 at 2940.589 kb on + strand, within CA264_12600 at 2940.599 kb on + strand, within CA264_12600 at 2940.621 kb on + strand, within CA264_12600 at 2940.687 kb on - strand, within CA264_12600 at 2940.896 kb on + strand, within CA264_12600 at 2940.897 kb on - strand, within CA264_12600 at 2940.897 kb on - strand, within CA264_12600 at 2940.955 kb on - strand, within CA264_12600 at 2941.107 kb on + strand, within CA264_12600 at 2941.108 kb on - strand, within CA264_12600 at 2941.141 kb on - strand, within CA264_12600 at 2941.271 kb on + strand at 2941.271 kb on + strand at 2941.359 kb on + strand at 2941.360 kb on - strand at 2941.360 kb on - strand at 2941.362 kb on + strand at 2941.410 kb on - strand at 2941.414 kb on - strand at 2941.440 kb on + strand at 2941.458 kb on - strand at 2941.458 kb on - strand at 2941.582 kb on + strand, within CA264_12605 at 2941.582 kb on + strand, within CA264_12605 at 2941.584 kb on + strand, within CA264_12605 at 2941.585 kb on - strand, within CA264_12605 at 2941.585 kb on - strand, within CA264_12605 at 2941.626 kb on + strand, within CA264_12605 at 2941.627 kb on - strand, within CA264_12605 at 2941.838 kb on + strand, within CA264_12605 at 2941.840 kb on + strand, within CA264_12605 at 2941.841 kb on - strand, within CA264_12605 at 2941.900 kb on + strand, within CA264_12605 at 2941.900 kb on + strand, within CA264_12605 at 2941.901 kb on - strand, within CA264_12605 at 2941.920 kb on + strand, within CA264_12605 at 2941.949 kb on + strand, within CA264_12605 at 2942.003 kb on + strand, within CA264_12605 at 2942.129 kb on + strand at 2942.130 kb on - strand at 2942.132 kb on + strand at 2942.132 kb on + strand at 2942.133 kb on - strand at 2942.133 kb on - strand at 2942.144 kb on + strand at 2942.144 kb on + strand at 2942.149 kb on + strand at 2942.150 kb on - strand at 2942.152 kb on + strand at 2942.262 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 2,939,164 - CA264_12590 0.69 -0.1 2,939,200 - CA264_12590 0.72 -0.3 2,939,243 + CA264_12590 0.75 +0.2 2,939,243 + CA264_12590 0.75 -1.5 2,939,243 + CA264_12590 0.75 -0.4 2,939,244 - CA264_12590 0.75 -0.4 2,939,244 - CA264_12590 0.75 +0.2 2,939,244 - CA264_12590 0.75 +0.1 2,939,252 - CA264_12590 0.76 -0.2 2,939,257 - CA264_12590 0.76 -0.5 2,939,303 + CA264_12590 0.80 -0.5 2,939,331 + CA264_12590 0.82 +0.3 2,939,332 - CA264_12590 0.82 -0.4 2,939,332 - CA264_12590 0.82 -0.8 2,939,332 - CA264_12590 0.82 +1.8 2,939,392 - CA264_12590 0.87 -1.6 2,939,431 + -0.6 2,939,487 + -0.4 2,939,487 + +0.2 2,939,487 + +0.2 2,939,530 + -0.6 2,939,531 - +0.1 2,939,571 - -0.4 2,939,589 + -0.4 2,939,594 + +0.4 2,939,617 + +1.0 2,939,618 - -1.2 2,939,633 - +0.6 2,939,653 + +1.2 2,939,758 + CA264_12595 0.25 -1.2 2,939,759 - CA264_12595 0.25 -0.3 2,939,759 - CA264_12595 0.25 +0.4 2,939,869 - CA264_12595 0.46 +0.1 2,940,156 + +1.6 2,940,156 + +0.4 2,940,156 + +1.5 2,940,288 + CA264_12600 0.12 -1.9 2,940,289 - CA264_12600 0.12 -0.5 2,940,346 - CA264_12600 0.17 +0.4 2,940,442 - CA264_12600 0.25 +0.7 2,940,451 + CA264_12600 0.26 +0.4 2,940,451 + CA264_12600 0.26 -1.1 2,940,451 + CA264_12600 0.26 +0.1 2,940,451 + CA264_12600 0.26 +0.6 2,940,452 - CA264_12600 0.26 +0.2 2,940,454 - CA264_12600 0.26 -0.5 2,940,484 + CA264_12600 0.29 -0.7 2,940,509 + CA264_12600 0.31 -0.2 2,940,589 + CA264_12600 0.38 +0.5 2,940,599 + CA264_12600 0.39 +0.1 2,940,621 + CA264_12600 0.41 +0.1 2,940,687 - CA264_12600 0.47 +0.5 2,940,896 + CA264_12600 0.66 +0.5 2,940,897 - CA264_12600 0.66 +1.1 2,940,897 - CA264_12600 0.66 +0.4 2,940,955 - CA264_12600 0.71 -0.1 2,941,107 + CA264_12600 0.84 +0.2 2,941,108 - CA264_12600 0.84 +0.8 2,941,141 - CA264_12600 0.87 +1.5 2,941,271 + -0.5 2,941,271 + +0.7 2,941,359 + -0.0 2,941,360 - +0.5 2,941,360 - +0.5 2,941,362 + -0.6 2,941,410 - +0.8 2,941,414 - -1.3 2,941,440 + -0.3 2,941,458 - -0.3 2,941,458 - -0.1 2,941,582 + CA264_12605 0.21 -0.1 2,941,582 + CA264_12605 0.21 -0.3 2,941,584 + CA264_12605 0.22 -0.2 2,941,585 - CA264_12605 0.22 -0.9 2,941,585 - CA264_12605 0.22 -0.3 2,941,626 + CA264_12605 0.29 -1.0 2,941,627 - CA264_12605 0.29 +0.5 2,941,838 + CA264_12605 0.63 -0.5 2,941,840 + CA264_12605 0.63 -0.3 2,941,841 - CA264_12605 0.63 +0.1 2,941,900 + CA264_12605 0.73 -0.7 2,941,900 + CA264_12605 0.73 +0.9 2,941,901 - CA264_12605 0.73 -0.2 2,941,920 + CA264_12605 0.76 +0.1 2,941,949 + CA264_12605 0.81 +0.6 2,942,003 + CA264_12605 0.89 +0.7 2,942,129 + +0.0 2,942,130 - -0.1 2,942,132 + -0.8 2,942,132 + -0.6 2,942,133 - -0.1 2,942,133 - -0.3 2,942,144 + +0.3 2,942,144 + -0.1 2,942,149 + -1.5 2,942,150 - +0.0 2,942,152 + +0.2 2,942,262 + +0.5
Or see this region's nucleotide sequence