Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11130 and CA264_11135 are separated by 31 nucleotides CA264_11135 and CA264_11140 are separated by 266 nucleotides CA264_11140 and CA264_11145 overlap by 8 nucleotides
CA264_11130: CA264_11130 - mechanosensitive ion channel protein MscS, at 2,570,586 to 2,571,674
_11130
CA264_11135: CA264_11135 - DUF2179 domain-containing protein, at 2,571,706 to 2,572,305
_11135
CA264_11140: CA264_11140 - 1,4-alpha-glucan branching enzyme, at 2,572,572 to 2,574,899
_11140
CA264_11145: CA264_11145 - maltose alpha-D-glucosyltransferase, at 2,574,892 to 2,578,227
_11145
Position (kb)
2572
2573
2574
2575 Strain fitness (log2 ratio)
-2
-1
0
1 at 2571.613 kb on + strand at 2571.618 kb on - strand at 2571.699 kb on - strand at 2571.928 kb on + strand at 2571.928 kb on + strand, within CA264_11135 at 2571.929 kb on - strand, within CA264_11135 at 2572.021 kb on - strand, within CA264_11135 at 2572.116 kb on + strand, within CA264_11135 at 2572.264 kb on - strand at 2572.264 kb on - strand at 2572.303 kb on + strand at 2572.304 kb on - strand at 2572.304 kb on - strand at 2572.354 kb on - strand at 2572.368 kb on + strand at 2572.386 kb on + strand at 2572.387 kb on - strand at 2572.391 kb on - strand at 2572.392 kb on + strand at 2572.392 kb on + strand at 2572.392 kb on + strand at 2572.393 kb on - strand at 2572.393 kb on - strand at 2572.393 kb on - strand at 2572.448 kb on + strand at 2572.478 kb on + strand at 2572.485 kb on + strand at 2572.503 kb on + strand at 2572.506 kb on - strand at 2572.506 kb on - strand at 2572.510 kb on + strand at 2572.511 kb on - strand at 2572.615 kb on - strand at 2572.676 kb on + strand at 2572.677 kb on - strand at 2572.677 kb on - strand at 2572.868 kb on - strand, within CA264_11140 at 2572.868 kb on - strand, within CA264_11140 at 2572.930 kb on + strand, within CA264_11140 at 2572.942 kb on - strand, within CA264_11140 at 2572.962 kb on + strand, within CA264_11140 at 2572.976 kb on - strand, within CA264_11140 at 2573.087 kb on - strand, within CA264_11140 at 2573.104 kb on - strand, within CA264_11140 at 2573.216 kb on - strand, within CA264_11140 at 2573.216 kb on - strand, within CA264_11140 at 2573.219 kb on + strand, within CA264_11140 at 2573.219 kb on + strand, within CA264_11140 at 2573.219 kb on + strand, within CA264_11140 at 2573.219 kb on + strand, within CA264_11140 at 2573.220 kb on - strand, within CA264_11140 at 2573.220 kb on - strand, within CA264_11140 at 2573.222 kb on + strand, within CA264_11140 at 2573.225 kb on + strand, within CA264_11140 at 2573.226 kb on - strand, within CA264_11140 at 2573.319 kb on - strand, within CA264_11140 at 2573.321 kb on + strand, within CA264_11140 at 2573.426 kb on + strand, within CA264_11140 at 2573.427 kb on - strand, within CA264_11140 at 2573.519 kb on - strand, within CA264_11140 at 2573.627 kb on + strand, within CA264_11140 at 2573.628 kb on - strand, within CA264_11140 at 2573.635 kb on + strand, within CA264_11140 at 2573.636 kb on - strand, within CA264_11140 at 2573.636 kb on - strand, within CA264_11140 at 2574.019 kb on + strand, within CA264_11140 at 2574.020 kb on - strand, within CA264_11140 at 2574.056 kb on + strand, within CA264_11140 at 2574.057 kb on - strand, within CA264_11140 at 2574.057 kb on - strand, within CA264_11140 at 2574.091 kb on + strand, within CA264_11140 at 2574.173 kb on - strand, within CA264_11140 at 2574.182 kb on - strand, within CA264_11140 at 2574.200 kb on - strand, within CA264_11140 at 2574.200 kb on - strand, within CA264_11140 at 2574.205 kb on + strand, within CA264_11140 at 2574.206 kb on - strand, within CA264_11140 at 2574.206 kb on - strand, within CA264_11140 at 2574.355 kb on + strand, within CA264_11140 at 2574.355 kb on + strand, within CA264_11140 at 2574.356 kb on - strand, within CA264_11140 at 2574.439 kb on + strand, within CA264_11140 at 2574.448 kb on + strand, within CA264_11140 at 2574.448 kb on + strand, within CA264_11140 at 2574.449 kb on - strand, within CA264_11140 at 2574.469 kb on + strand, within CA264_11140 at 2574.674 kb on + strand at 2574.674 kb on + strand at 2574.920 kb on + strand at 2574.974 kb on + strand at 2575.091 kb on + strand at 2575.106 kb on + strand at 2575.107 kb on - strand at 2575.112 kb on + strand at 2575.113 kb on - strand at 2575.139 kb on + strand at 2575.185 kb on + strand at 2575.186 kb on - strand at 2575.298 kb on + strand, within CA264_11145 at 2575.338 kb on - strand, within CA264_11145 at 2575.338 kb on - strand, within CA264_11145 at 2575.464 kb on + strand, within CA264_11145 at 2575.563 kb on + strand, within CA264_11145 at 2575.563 kb on + strand, within CA264_11145 at 2575.682 kb on - strand, within CA264_11145 at 2575.849 kb on - strand, within CA264_11145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 2,571,613 + -0.0 2,571,618 - -0.3 2,571,699 - -0.2 2,571,928 + +0.9 2,571,928 + CA264_11135 0.37 -0.2 2,571,929 - CA264_11135 0.37 -0.7 2,572,021 - CA264_11135 0.53 -1.3 2,572,116 + CA264_11135 0.68 -0.1 2,572,264 - -0.0 2,572,264 - -0.5 2,572,303 + -0.1 2,572,304 - +1.3 2,572,304 - -0.5 2,572,354 - -0.3 2,572,368 + +0.1 2,572,386 + -0.9 2,572,387 - +0.1 2,572,391 - +1.5 2,572,392 + -0.0 2,572,392 + +0.5 2,572,392 + -1.1 2,572,393 - +1.2 2,572,393 - +0.1 2,572,393 - -0.4 2,572,448 + +0.0 2,572,478 + -0.3 2,572,485 + -0.6 2,572,503 + +0.7 2,572,506 - -0.4 2,572,506 - +1.0 2,572,510 + +0.5 2,572,511 - -1.2 2,572,615 - +0.1 2,572,676 + +0.3 2,572,677 - +0.2 2,572,677 - -0.2 2,572,868 - CA264_11140 0.13 +0.2 2,572,868 - CA264_11140 0.13 -0.3 2,572,930 + CA264_11140 0.15 -0.8 2,572,942 - CA264_11140 0.16 -0.5 2,572,962 + CA264_11140 0.17 -0.2 2,572,976 - CA264_11140 0.17 -0.2 2,573,087 - CA264_11140 0.22 -0.8 2,573,104 - CA264_11140 0.23 +0.2 2,573,216 - CA264_11140 0.28 -0.1 2,573,216 - CA264_11140 0.28 -0.3 2,573,219 + CA264_11140 0.28 -0.1 2,573,219 + CA264_11140 0.28 -0.0 2,573,219 + CA264_11140 0.28 -0.6 2,573,219 + CA264_11140 0.28 -0.5 2,573,220 - CA264_11140 0.28 -0.3 2,573,220 - CA264_11140 0.28 -0.5 2,573,222 + CA264_11140 0.28 +0.1 2,573,225 + CA264_11140 0.28 +0.1 2,573,226 - CA264_11140 0.28 +0.2 2,573,319 - CA264_11140 0.32 +0.7 2,573,321 + CA264_11140 0.32 +0.1 2,573,426 + CA264_11140 0.37 +0.7 2,573,427 - CA264_11140 0.37 -0.2 2,573,519 - CA264_11140 0.41 -0.2 2,573,627 + CA264_11140 0.45 +0.6 2,573,628 - CA264_11140 0.45 -0.1 2,573,635 + CA264_11140 0.46 +0.1 2,573,636 - CA264_11140 0.46 -0.2 2,573,636 - CA264_11140 0.46 -0.3 2,574,019 + CA264_11140 0.62 +0.4 2,574,020 - CA264_11140 0.62 +1.5 2,574,056 + CA264_11140 0.64 +0.1 2,574,057 - CA264_11140 0.64 -0.7 2,574,057 - CA264_11140 0.64 -0.6 2,574,091 + CA264_11140 0.65 +0.9 2,574,173 - CA264_11140 0.69 -1.5 2,574,182 - CA264_11140 0.69 +1.2 2,574,200 - CA264_11140 0.70 -0.3 2,574,200 - CA264_11140 0.70 +0.3 2,574,205 + CA264_11140 0.70 -0.1 2,574,206 - CA264_11140 0.70 -0.7 2,574,206 - CA264_11140 0.70 -1.9 2,574,355 + CA264_11140 0.77 -0.3 2,574,355 + CA264_11140 0.77 -1.3 2,574,356 - CA264_11140 0.77 -2.4 2,574,439 + CA264_11140 0.80 +0.4 2,574,448 + CA264_11140 0.81 +0.5 2,574,448 + CA264_11140 0.81 -0.5 2,574,449 - CA264_11140 0.81 -0.6 2,574,469 + CA264_11140 0.81 -0.9 2,574,674 + +0.4 2,574,674 + -1.1 2,574,920 + +1.0 2,574,974 + +0.1 2,575,091 + -0.1 2,575,106 + -0.2 2,575,107 - +1.2 2,575,112 + -0.4 2,575,113 - +0.0 2,575,139 + +0.2 2,575,185 + -0.6 2,575,186 - +0.8 2,575,298 + CA264_11145 0.12 +1.2 2,575,338 - CA264_11145 0.13 -0.5 2,575,338 - CA264_11145 0.13 +0.6 2,575,464 + CA264_11145 0.17 -0.5 2,575,563 + CA264_11145 0.20 -0.2 2,575,563 + CA264_11145 0.20 -0.1 2,575,682 - CA264_11145 0.24 -0.7 2,575,849 - CA264_11145 0.29 +0.1
Or see this region's nucleotide sequence