Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09220 and CA264_09225 are separated by 201 nucleotides CA264_09225 and CA264_09230 are separated by 3 nucleotides CA264_09230 and CA264_09235 are separated by 158 nucleotides
CA264_09220: CA264_09220 - ferredoxin, at 2,158,590 to 2,158,913
_09220
CA264_09225: CA264_09225 - Fe-S oxidoreductase, at 2,159,115 to 2,159,855
_09225
CA264_09230: CA264_09230 - hydroxymethylglutaryl-CoA lyase, at 2,159,859 to 2,160,704
_09230
CA264_09235: CA264_09235 - short-chain dehydrogenase, at 2,160,863 to 2,161,717
_09235
Position (kb)
2159
2160
2161 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2158.899 kb on - strand at 2159.020 kb on + strand at 2159.021 kb on - strand at 2159.024 kb on - strand at 2159.060 kb on + strand at 2159.061 kb on - strand at 2159.084 kb on + strand at 2159.084 kb on + strand at 2159.110 kb on + strand at 2159.110 kb on + strand at 2159.111 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.182 kb on + strand at 2159.228 kb on - strand, within CA264_09225 at 2159.256 kb on + strand, within CA264_09225 at 2159.274 kb on - strand, within CA264_09225 at 2159.285 kb on + strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.376 kb on + strand, within CA264_09225 at 2159.377 kb on - strand, within CA264_09225 at 2159.438 kb on - strand, within CA264_09225 at 2159.444 kb on - strand, within CA264_09225 at 2159.477 kb on + strand, within CA264_09225 at 2159.478 kb on - strand, within CA264_09225 at 2159.578 kb on + strand, within CA264_09225 at 2159.626 kb on + strand, within CA264_09225 at 2159.664 kb on - strand, within CA264_09225 at 2159.739 kb on - strand, within CA264_09225 at 2159.740 kb on + strand, within CA264_09225 at 2159.831 kb on + strand at 2159.839 kb on - strand at 2159.855 kb on + strand at 2159.855 kb on + strand at 2159.856 kb on - strand at 2159.863 kb on - strand at 2159.925 kb on + strand at 2160.093 kb on - strand, within CA264_09230 at 2160.093 kb on - strand, within CA264_09230 at 2160.271 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.299 kb on - strand, within CA264_09230 at 2160.302 kb on + strand, within CA264_09230 at 2160.627 kb on - strand at 2160.647 kb on + strand at 2160.651 kb on + strand at 2160.654 kb on - strand at 2160.812 kb on - strand at 2160.819 kb on - strand at 2160.823 kb on + strand at 2160.835 kb on + strand at 2160.835 kb on + strand at 2160.836 kb on - strand at 2160.837 kb on + strand at 2160.845 kb on + strand at 2160.873 kb on + strand at 2160.967 kb on + strand, within CA264_09235 at 2160.980 kb on - strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.043 kb on + strand, within CA264_09235 at 2161.044 kb on - strand, within CA264_09235 at 2161.044 kb on - strand, within CA264_09235 at 2161.051 kb on - strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.201 kb on + strand, within CA264_09235 at 2161.328 kb on + strand, within CA264_09235 at 2161.411 kb on - strand, within CA264_09235 at 2161.411 kb on - strand, within CA264_09235 at 2161.431 kb on - strand, within CA264_09235 at 2161.435 kb on - strand, within CA264_09235 at 2161.593 kb on + strand, within CA264_09235 at 2161.620 kb on + strand, within CA264_09235 at 2161.620 kb on + strand, within CA264_09235 at 2161.621 kb on - strand, within CA264_09235 at 2161.621 kb on - strand, within CA264_09235 at 2161.638 kb on + strand at 2161.639 kb on - strand at 2161.640 kb on + strand at 2161.640 kb on + strand at 2161.640 kb on + strand at 2161.641 kb on - strand at 2161.641 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 2,158,899 - -0.3 2,159,020 + -0.2 2,159,021 - -0.4 2,159,024 - +0.6 2,159,060 + -0.6 2,159,061 - -0.9 2,159,084 + -0.1 2,159,084 + -0.4 2,159,110 + -0.7 2,159,110 + -0.4 2,159,111 - +1.8 2,159,113 - +0.1 2,159,113 - +0.1 2,159,113 - -0.3 2,159,113 - -0.2 2,159,182 + -1.8 2,159,228 - CA264_09225 0.15 +0.1 2,159,256 + CA264_09225 0.19 -0.5 2,159,274 - CA264_09225 0.21 -0.6 2,159,285 + CA264_09225 0.23 -1.0 2,159,286 - CA264_09225 0.23 -0.3 2,159,286 - CA264_09225 0.23 -0.2 2,159,286 - CA264_09225 0.23 +0.5 2,159,310 - CA264_09225 0.26 -0.6 2,159,310 - CA264_09225 0.26 +0.0 2,159,376 + CA264_09225 0.35 -0.8 2,159,377 - CA264_09225 0.35 -0.3 2,159,438 - CA264_09225 0.44 +0.1 2,159,444 - CA264_09225 0.44 -0.7 2,159,477 + CA264_09225 0.49 -1.0 2,159,478 - CA264_09225 0.49 -1.0 2,159,578 + CA264_09225 0.62 -0.5 2,159,626 + CA264_09225 0.69 -0.3 2,159,664 - CA264_09225 0.74 -0.6 2,159,739 - CA264_09225 0.84 +1.3 2,159,740 + CA264_09225 0.84 -0.7 2,159,831 + -0.7 2,159,839 - -0.5 2,159,855 + -0.3 2,159,855 + -1.1 2,159,856 - -0.4 2,159,863 - -0.1 2,159,925 + -0.7 2,160,093 - CA264_09230 0.28 -0.8 2,160,093 - CA264_09230 0.28 +0.7 2,160,271 + CA264_09230 0.49 -0.4 2,160,298 + CA264_09230 0.52 -2.3 2,160,298 + CA264_09230 0.52 -1.8 2,160,298 + CA264_09230 0.52 -0.1 2,160,299 - CA264_09230 0.52 +0.4 2,160,302 + CA264_09230 0.52 -0.9 2,160,627 - -0.6 2,160,647 + -2.6 2,160,651 + -0.6 2,160,654 - +0.4 2,160,812 - -1.4 2,160,819 - -1.4 2,160,823 + -0.8 2,160,835 + -1.6 2,160,835 + -0.5 2,160,836 - +0.1 2,160,837 + -2.5 2,160,845 + -0.5 2,160,873 + +0.5 2,160,967 + CA264_09235 0.12 -0.7 2,160,980 - CA264_09235 0.14 -0.2 2,161,039 + CA264_09235 0.21 -1.2 2,161,039 + CA264_09235 0.21 -1.3 2,161,039 + CA264_09235 0.21 -1.3 2,161,040 - CA264_09235 0.21 +0.3 2,161,040 - CA264_09235 0.21 -1.0 2,161,040 - CA264_09235 0.21 -0.5 2,161,043 + CA264_09235 0.21 -0.5 2,161,044 - CA264_09235 0.21 -0.6 2,161,044 - CA264_09235 0.21 -1.1 2,161,051 - CA264_09235 0.22 -0.4 2,161,122 + CA264_09235 0.30 -0.8 2,161,122 + CA264_09235 0.30 -1.2 2,161,122 + CA264_09235 0.30 -0.8 2,161,201 + CA264_09235 0.40 -1.4 2,161,328 + CA264_09235 0.54 -1.5 2,161,411 - CA264_09235 0.64 -0.2 2,161,411 - CA264_09235 0.64 -0.6 2,161,431 - CA264_09235 0.66 -0.7 2,161,435 - CA264_09235 0.67 -0.0 2,161,593 + CA264_09235 0.85 -0.3 2,161,620 + CA264_09235 0.89 -0.8 2,161,620 + CA264_09235 0.89 +0.4 2,161,621 - CA264_09235 0.89 +0.3 2,161,621 - CA264_09235 0.89 -0.4 2,161,638 + -1.7 2,161,639 - -1.0 2,161,640 + -2.0 2,161,640 + -0.6 2,161,640 + -0.7 2,161,641 - -0.3 2,161,641 - -0.4
Or see this region's nucleotide sequence