Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07100 and CA264_07105 are separated by 928 nucleotides CA264_07105 and CA264_07110 are separated by 283 nucleotides CA264_07110 and CA264_07115 are separated by 4 nucleotides
CA264_07100: CA264_07100 - PrkA family serine protein kinase, at 1,635,606 to 1,637,534
_07100
CA264_07105: CA264_07105 - phosphohydrolase, at 1,638,463 to 1,639,722
_07105
CA264_07110: CA264_07110 - hypothetical protein, at 1,640,006 to 1,640,308
_07110
CA264_07115: CA264_07115 - hypothetical protein, at 1,640,313 to 1,640,813
_07115
Position (kb)
1638
1639
1640 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1637.476 kb on - strand at 1637.535 kb on - strand at 1637.535 kb on - strand at 1637.550 kb on + strand at 1637.551 kb on - strand at 1637.552 kb on + strand at 1637.553 kb on - strand at 1637.597 kb on - strand at 1637.629 kb on + strand at 1637.630 kb on - strand at 1637.637 kb on + strand at 1637.638 kb on - strand at 1637.638 kb on - strand at 1637.638 kb on - strand at 1637.643 kb on + strand at 1637.648 kb on + strand at 1637.648 kb on + strand at 1637.649 kb on - strand at 1637.650 kb on + strand at 1637.651 kb on - strand at 1637.651 kb on - strand at 1637.651 kb on - strand at 1637.662 kb on + strand at 1637.662 kb on + strand at 1637.662 kb on + strand at 1637.662 kb on + strand at 1637.663 kb on - strand at 1637.668 kb on - strand at 1637.747 kb on + strand at 1637.748 kb on - strand at 1637.748 kb on - strand at 1637.752 kb on - strand at 1637.768 kb on + strand at 1637.769 kb on - strand at 1637.769 kb on - strand at 1637.786 kb on + strand at 1637.786 kb on + strand at 1637.787 kb on - strand at 1637.787 kb on - strand at 1637.798 kb on + strand at 1637.799 kb on - strand at 1637.799 kb on - strand at 1637.901 kb on + strand at 1637.902 kb on - strand at 1637.902 kb on - strand at 1638.071 kb on + strand at 1638.142 kb on + strand at 1638.158 kb on + strand at 1638.163 kb on - strand at 1638.163 kb on - strand at 1638.200 kb on - strand at 1638.215 kb on - strand at 1638.219 kb on + strand at 1638.219 kb on + strand at 1638.297 kb on - strand at 1638.297 kb on - strand at 1638.321 kb on - strand at 1638.321 kb on - strand at 1638.374 kb on + strand at 1638.374 kb on + strand at 1638.375 kb on - strand at 1638.436 kb on + strand at 1638.436 kb on + strand at 1638.500 kb on - strand at 1638.715 kb on + strand, within CA264_07105 at 1638.756 kb on + strand, within CA264_07105 at 1638.756 kb on + strand, within CA264_07105 at 1638.809 kb on - strand, within CA264_07105 at 1638.974 kb on + strand, within CA264_07105 at 1638.975 kb on - strand, within CA264_07105 at 1639.007 kb on + strand, within CA264_07105 at 1639.017 kb on - strand, within CA264_07105 at 1639.017 kb on - strand, within CA264_07105 at 1639.049 kb on + strand, within CA264_07105 at 1639.050 kb on - strand, within CA264_07105 at 1639.201 kb on - strand, within CA264_07105 at 1639.238 kb on - strand, within CA264_07105 at 1639.259 kb on + strand, within CA264_07105 at 1639.265 kb on + strand, within CA264_07105 at 1639.265 kb on + strand, within CA264_07105 at 1639.265 kb on + strand, within CA264_07105 at 1639.266 kb on - strand, within CA264_07105 at 1639.266 kb on - strand, within CA264_07105 at 1639.282 kb on - strand, within CA264_07105 at 1639.459 kb on - strand, within CA264_07105 at 1639.548 kb on - strand, within CA264_07105 at 1639.604 kb on + strand at 1639.604 kb on + strand at 1639.670 kb on + strand at 1639.671 kb on - strand at 1639.706 kb on - strand at 1639.706 kb on - strand at 1639.711 kb on - strand at 1639.727 kb on + strand at 1639.727 kb on + strand at 1639.727 kb on + strand at 1639.763 kb on + strand at 1639.766 kb on - strand at 1639.794 kb on + strand at 1639.794 kb on + strand at 1639.808 kb on - strand at 1639.886 kb on + strand at 1639.894 kb on + strand at 1639.894 kb on + strand at 1639.909 kb on + strand at 1639.909 kb on + strand at 1639.909 kb on + strand at 1639.931 kb on + strand at 1639.931 kb on + strand at 1639.936 kb on - strand at 1639.937 kb on + strand at 1639.937 kb on + strand at 1639.943 kb on + strand at 1639.984 kb on + strand at 1639.987 kb on + strand at 1639.992 kb on + strand at 1639.993 kb on - strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.005 kb on + strand at 1640.006 kb on - strand at 1640.006 kb on - strand at 1640.006 kb on - strand at 1640.036 kb on + strand at 1640.037 kb on - strand, within CA264_07110 at 1640.037 kb on - strand, within CA264_07110 at 1640.038 kb on + strand, within CA264_07110 at 1640.038 kb on + strand, within CA264_07110 at 1640.039 kb on - strand, within CA264_07110 at 1640.039 kb on - strand, within CA264_07110 at 1640.046 kb on + strand, within CA264_07110 at 1640.125 kb on + strand, within CA264_07110 at 1640.125 kb on + strand, within CA264_07110 at 1640.131 kb on - strand, within CA264_07110 at 1640.278 kb on + strand at 1640.279 kb on - strand at 1640.279 kb on - strand at 1640.306 kb on + strand at 1640.314 kb on + strand at 1640.314 kb on + strand at 1640.352 kb on - strand at 1640.352 kb on - strand at 1640.352 kb on - strand at 1640.411 kb on + strand, within CA264_07115 at 1640.416 kb on - strand, within CA264_07115 at 1640.430 kb on + strand, within CA264_07115 at 1640.440 kb on + strand, within CA264_07115 at 1640.441 kb on - strand, within CA264_07115 at 1640.444 kb on + strand, within CA264_07115 at 1640.445 kb on - strand, within CA264_07115 at 1640.477 kb on + strand, within CA264_07115 at 1640.528 kb on + strand, within CA264_07115 at 1640.528 kb on + strand, within CA264_07115 at 1640.624 kb on + strand, within CA264_07115 at 1640.624 kb on + strand, within CA264_07115 at 1640.625 kb on - strand, within CA264_07115 at 1640.632 kb on + strand, within CA264_07115 at 1640.632 kb on + strand, within CA264_07115 at 1640.633 kb on - strand, within CA264_07115 at 1640.656 kb on + strand, within CA264_07115 at 1640.657 kb on - strand, within CA264_07115 at 1640.707 kb on + strand, within CA264_07115 at 1640.708 kb on - strand, within CA264_07115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,637,476 - +0.2 1,637,535 - -0.6 1,637,535 - +0.6 1,637,550 + +1.8 1,637,551 - +0.3 1,637,552 + +0.3 1,637,553 - +0.2 1,637,597 - -0.5 1,637,629 + -0.4 1,637,630 - -1.5 1,637,637 + -2.8 1,637,638 - -0.2 1,637,638 - +0.2 1,637,638 - +0.5 1,637,643 + -0.4 1,637,648 + -0.4 1,637,648 + -0.8 1,637,649 - -0.0 1,637,650 + -0.6 1,637,651 - +0.0 1,637,651 - -0.3 1,637,651 - -0.2 1,637,662 + +0.5 1,637,662 + +0.3 1,637,662 + +0.1 1,637,662 + +0.0 1,637,663 - -0.8 1,637,668 - -0.1 1,637,747 + -0.4 1,637,748 - +0.5 1,637,748 - -0.5 1,637,752 - -1.2 1,637,768 + -0.5 1,637,769 - -0.2 1,637,769 - -0.1 1,637,786 + +1.4 1,637,786 + -0.2 1,637,787 - -0.2 1,637,787 - -0.6 1,637,798 + +0.0 1,637,799 - -1.6 1,637,799 - -0.4 1,637,901 + +0.4 1,637,902 - -0.0 1,637,902 - +0.3 1,638,071 + -0.4 1,638,142 + +0.6 1,638,158 + -0.2 1,638,163 - +0.1 1,638,163 - -0.7 1,638,200 - -1.0 1,638,215 - +0.7 1,638,219 + -0.1 1,638,219 + -0.3 1,638,297 - +0.1 1,638,297 - +0.3 1,638,321 - +1.0 1,638,321 - +0.8 1,638,374 + +0.3 1,638,374 + -1.4 1,638,375 - -0.3 1,638,436 + +0.3 1,638,436 + +0.0 1,638,500 - -0.2 1,638,715 + CA264_07105 0.20 -0.2 1,638,756 + CA264_07105 0.23 +0.0 1,638,756 + CA264_07105 0.23 -0.2 1,638,809 - CA264_07105 0.27 +0.5 1,638,974 + CA264_07105 0.41 -0.4 1,638,975 - CA264_07105 0.41 +0.4 1,639,007 + CA264_07105 0.43 -0.3 1,639,017 - CA264_07105 0.44 +0.5 1,639,017 - CA264_07105 0.44 -0.9 1,639,049 + CA264_07105 0.47 -1.4 1,639,050 - CA264_07105 0.47 -0.6 1,639,201 - CA264_07105 0.59 -0.2 1,639,238 - CA264_07105 0.62 -0.1 1,639,259 + CA264_07105 0.63 -1.0 1,639,265 + CA264_07105 0.64 +0.3 1,639,265 + CA264_07105 0.64 -0.2 1,639,265 + CA264_07105 0.64 -0.5 1,639,266 - CA264_07105 0.64 +0.2 1,639,266 - CA264_07105 0.64 -0.5 1,639,282 - CA264_07105 0.65 -0.2 1,639,459 - CA264_07105 0.79 +0.6 1,639,548 - CA264_07105 0.86 -0.2 1,639,604 + -0.7 1,639,604 + -0.9 1,639,670 + -0.2 1,639,671 - -0.9 1,639,706 - -0.1 1,639,706 - -0.1 1,639,711 - -0.2 1,639,727 + -0.7 1,639,727 + -0.7 1,639,727 + -0.0 1,639,763 + +0.0 1,639,766 - -0.0 1,639,794 + -2.4 1,639,794 + -0.1 1,639,808 - -0.9 1,639,886 + -0.5 1,639,894 + +0.5 1,639,894 + -0.6 1,639,909 + +2.3 1,639,909 + +0.5 1,639,909 + +0.3 1,639,931 + -1.4 1,639,931 + +0.4 1,639,936 - +0.1 1,639,937 + -1.0 1,639,937 + +0.6 1,639,943 + -2.4 1,639,984 + -0.8 1,639,987 + +0.5 1,639,992 + -0.4 1,639,993 - +0.3 1,640,005 + +0.2 1,640,005 + +0.2 1,640,005 + -0.3 1,640,005 + -1.1 1,640,005 + +0.1 1,640,006 - -1.3 1,640,006 - +0.1 1,640,006 - +0.3 1,640,036 + -0.5 1,640,037 - CA264_07110 0.10 -1.0 1,640,037 - CA264_07110 0.10 +0.0 1,640,038 + CA264_07110 0.11 -2.0 1,640,038 + CA264_07110 0.11 +0.5 1,640,039 - CA264_07110 0.11 +0.9 1,640,039 - CA264_07110 0.11 -0.2 1,640,046 + CA264_07110 0.13 -0.5 1,640,125 + CA264_07110 0.39 +0.4 1,640,125 + CA264_07110 0.39 -0.1 1,640,131 - CA264_07110 0.41 -0.7 1,640,278 + +0.6 1,640,279 - +0.6 1,640,279 - -0.4 1,640,306 + +1.3 1,640,314 + -0.7 1,640,314 + +1.0 1,640,352 - +1.9 1,640,352 - +1.0 1,640,352 - +0.8 1,640,411 + CA264_07115 0.20 -0.5 1,640,416 - CA264_07115 0.21 -0.5 1,640,430 + CA264_07115 0.23 +0.4 1,640,440 + CA264_07115 0.25 +0.1 1,640,441 - CA264_07115 0.26 -0.8 1,640,444 + CA264_07115 0.26 +0.9 1,640,445 - CA264_07115 0.26 +1.6 1,640,477 + CA264_07115 0.33 -0.8 1,640,528 + CA264_07115 0.43 +1.1 1,640,528 + CA264_07115 0.43 -0.9 1,640,624 + CA264_07115 0.62 -0.7 1,640,624 + CA264_07115 0.62 -1.4 1,640,625 - CA264_07115 0.62 +0.8 1,640,632 + CA264_07115 0.64 -0.7 1,640,632 + CA264_07115 0.64 -0.7 1,640,633 - CA264_07115 0.64 +0.0 1,640,656 + CA264_07115 0.68 -0.2 1,640,657 - CA264_07115 0.69 -0.8 1,640,707 + CA264_07115 0.79 -0.6 1,640,708 - CA264_07115 0.79 -0.5
Or see this region's nucleotide sequence